ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart27f09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|BT009463.1| Triticum aestivum clone wr1.pk0004.c11:fis, full ... 361 1e-96
2gb|BT008970.1| Triticum aestivum clone wdk1c.pk014.n5:fis, full ... 361 1e-96
3ref|XM_469854.1| Oryza sativa (japonica cultivar-group), mRNA 147 4e-32
4dbj|AK060701.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 9e-30
5gb|AY110470.1| Zea mays CL345_1 mRNA sequence 100 8e-18
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 86 1e-13
7gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genom... 86 1e-13
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
9gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome 46 0.11
10gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete g... 44 0.42
11gb|AY029475.1| Rhizobium sp. NGR234 aspartate-B-semialdehyde deh... 44 0.42
12gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome 42 1.6
13gb|AC121121.13| Mus musculus chromosome 9, clone RP23-401G21, co... 42 1.6
14gb|AC121580.3| Mus musculus BAC clone RP23-255J21 from 9, comple... 42 1.6
15gb|AC121900.2| Mus musculus BAC clone RP24-167E15 from 7, comple... 42 1.6
16gb|AC165251.2| Mus musculus BAC clone RP24-75C16 from chromosome... 42 1.6
17gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 42 1.6
18gb|AC006068.4| Arabidopsis thaliana chromosome 2 clone T20F21 ma... 42 1.6
19gb|CP000027.1| Dehalococcoides ethenogenes 195, complete genome 40 6.5
20gb|AC166833.4| Mus musculus BAC clone RP23-146A22 from chromosom... 40 6.5
21ref|XM_383600.1| Gibberella zeae PH-1 chromosome 2 hypothetical ... 40 6.5
22emb|Z95889.1|HS211A9 Human DNA sequence from clone CTA-211A9 on ... 40 6.5
23gb|AC087286.12| Homo sapiens chromosome 15, clone RP11-815J21, c... 40 6.5
24emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome 40 6.5
25gb|AC164311.4| Mus musculus BAC clone RP23-144H18 from chromosom... 40 6.5
26gb|AC099771.9| Mus Musculus Strain C57BL6/J chromosome 5 BAC, RP... 40 6.5
27gb|AC010661.8| Drosophila melanogaster 3L BAC RP98-13A12 (Roswel... 40 6.5
28gb|AC109607.47| Mus musculus strain C57BL/6J clone rp23-146a22 m... 40 6.5
29gb|DP000024.1| Eulemur macaco macaco target 1 genomic scaffold 40 6.5
30dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome 40 6.5
31emb|AL445594.3|CNS07ED4 Human chromosome 14 DNA sequence BAC R-7... 40 6.5
32gb|AE003565.3| Drosophila melanogaster chromosome 3L, section 20... 40 6.5
33emb|AL672073.8| Mouse DNA sequence from clone RP23-333P16 on chr... 40 6.5
34gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 40 6.5
35gb|AC132312.4| Mus musculus BAC clone RP24-298A20 from 12, compl... 40 6.5
36gb|AC132354.2| Mus musculus BAC clone RP24-112H7 from 12, comple... 40 6.5
37emb|AL352981.4|CNS05TC0 Human chromosome 14 DNA sequence BAC R-1... 40 6.5

>gb|BT009463.1| Triticum aestivum clone wr1.pk0004.c11:fis, full insert mRNA
           sequence
          Length = 904

 Score =  361 bits (182), Expect = 1e-96
 Identities = 227/242 (93%)
 Strand = Plus / Minus

                                                                       
Query: 241 gaccaaaactgagctcaaaatgactagagtacatcaatccatcaatggatagagcaatgt 300
           ||||||||||| | | ||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 702 gaccaaaactgggttgaaagtgactagagtacatcaatccatcaatggatagagcaacgt 643

                                                                       
Query: 301 ggcacatgagacaatggtagaaaggcggtcacttcagtagcatttcggcaatctggacag 360
           ||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||
Sbjct: 642 ggcacatgagacaatggtaaaaaggcggtcacttcagtagcatttcagcaatctgcacag 583

                                                                       
Query: 361 cgttcagcgccgcacctttacgtatctggtctccacagacaaataactccaaccctctgt 420
           |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 cgttcagcgcggcgcctttacgtatctggtctccacagacaaataactccaaccctctgt 523

                                                                       
Query: 421 tatcatcttgcgacaagtcctgacggatcctgccaactgatacatcatctttatccgata 480
           |||||||||| ||||||||||| || ||||| ||||||||||| ||||||||||||||||
Sbjct: 522 tatcatcttgtgacaagtcctggcgaatcctaccaactgatacgtcatctttatccgata 463

             
Query: 481 cc 482
           ||
Sbjct: 462 cc 461



 Score =  117 bits (59), Expect = 3e-23
 Identities = 104/119 (87%)
 Strand = Plus / Minus

                                                                       
Query: 120 aaagaccaacctaaggcaaaatccaaacaagcaaaaaagctccttttctcaacttctggc 179
           |||| ||||||||||||||||||| ||||||  ||||  |||||||||| ||||| ||||
Sbjct: 841 aaagtccaacctaaggcaaaatccgaacaagtgaaaaccctccttttctaaacttgtggc 782

                                                                      
Query: 180 tgcacgtctgcgtgcagcagatgactaaaacccgtcttacgctccttctgctaggttga 238
           ||||| | || ||||| |||||||||||| |||||||||| || |||||||||||||||
Sbjct: 781 tgcacttttgtgtgcaacagatgactaaagcccgtcttacacttcttctgctaggttga 723



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>gb|BT008970.1| Triticum aestivum clone wdk1c.pk014.n5:fis, full insert mRNA sequence
          Length = 1609

 Score =  361 bits (182), Expect = 1e-96
 Identities = 227/242 (93%)
 Strand = Plus / Minus

                                                                        
Query: 241  gaccaaaactgagctcaaaatgactagagtacatcaatccatcaatggatagagcaatgt 300
            ||||||||||| | | ||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1288 gaccaaaactgggttgaaagtgactagagtacatcaatccatcaatggatagagcaacgt 1229

                                                                        
Query: 301  ggcacatgagacaatggtagaaaggcggtcacttcagtagcatttcggcaatctggacag 360
            ||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||
Sbjct: 1228 ggcacatgagacaatggtaaaaaggcggtcacttcagtagcatttcagcaatctgcacag 1169

                                                                        
Query: 361  cgttcagcgccgcacctttacgtatctggtctccacagacaaataactccaaccctctgt 420
            |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1168 cgttcagcgcggcgcctttacgtatctggtctccacagacaaataactccaaccctctgt 1109

                                                                        
Query: 421  tatcatcttgcgacaagtcctgacggatcctgccaactgatacatcatctttatccgata 480
            |||||||||| ||||||||||| || ||||| ||||||||||| ||||||||||||||||
Sbjct: 1108 tatcatcttgtgacaagtcctggcgaatcctaccaactgatacgtcatctttatccgata 1049

              
Query: 481  cc 482
            ||
Sbjct: 1048 cc 1047



 Score =  117 bits (59), Expect = 3e-23
 Identities = 104/119 (87%)
 Strand = Plus / Minus

                                                                        
Query: 120  aaagaccaacctaaggcaaaatccaaacaagcaaaaaagctccttttctcaacttctggc 179
            |||| ||||||||||||||||||| ||||||  ||||  |||||||||| ||||| ||||
Sbjct: 1427 aaagtccaacctaaggcaaaatccgaacaagtgaaaaccctccttttctaaacttgtggc 1368

                                                                       
Query: 180  tgcacgtctgcgtgcagcagatgactaaaacccgtcttacgctccttctgctaggttga 238
            ||||| | || ||||| |||||||||||| |||||||||| || |||||||||||||||
Sbjct: 1367 tgcacttttgtgtgcaacagatgactaaagcccgtcttacacttcttctgctaggttga 1309



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>ref|XM_469854.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1332

 Score =  147 bits (74), Expect = 4e-32
 Identities = 134/154 (87%)
 Strand = Plus / Minus

                                                                        
Query: 329  tcacttcagtagcatttcggcaatctggacagcgttcagcgccgcacctttacgtatctg 388
            |||||| ||||||||||| |||||||| ||||| || || || |||||||||||||| ||
Sbjct: 1128 tcacttgagtagcatttcagcaatctgcacagcattgagtgcagcacctttacgtatttg 1069

                                                                        
Query: 389  gtctccacagacaaataactccaaccctctgttatcatcttgcgacaagtcctgacggat 448
             |||||||| |||||||  |||| |||| ||||||||||||||||||| |||||||| ||
Sbjct: 1068 atctccacaaacaaatatgtccagccctttgttatcatcttgcgacaaatcctgacgaat 1009

                                              
Query: 449  cctgccaactgatacatcatctttatccgatacc 482
             || || |||| ||||||||||||||||||||||
Sbjct: 1008 tctacccactgctacatcatctttatccgatacc 975



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>dbj|AK060701.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-G01, full
            insert sequence
          Length = 1383

 Score =  139 bits (70), Expect = 9e-30
 Identities = 133/154 (86%)
 Strand = Plus / Minus

                                                                        
Query: 329  tcacttcagtagcatttcggcaatctggacagcgttcagcgccgcacctttacgtatctg 388
            |||||| ||||||||||| |||||||| ||||| || || || |||||||||||||| ||
Sbjct: 1175 tcacttgagtagcatttcagcaatctgcacagcattgagtgcagcacctttacgtatttg 1116

                                                                        
Query: 389  gtctccacagacaaataactccaaccctctgttatcatcttgcgacaagtcctgacggat 448
             |||||||| |||||||  |||| |||| ||||| ||||||||||||| |||||||| ||
Sbjct: 1115 atctccacaaacaaatatgtccagccctttgttaccatcttgcgacaaatcctgacgaat 1056

                                              
Query: 449  cctgccaactgatacatcatctttatccgatacc 482
             || || |||| ||||||||||||||||||||||
Sbjct: 1055 tctacccactgctacatcatctttatccgatacc 1022



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>gb|AY110470.1| Zea mays CL345_1 mRNA sequence
          Length = 914

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 128/154 (83%)
 Strand = Plus / Minus

                                                                       
Query: 329 tcacttcagtagcatttcggcaatctggacagcgttcagcgccgcacctttacgtatctg 388
           ||||||||| |||||||| |||||||| || || || || || || ||||||||||||||
Sbjct: 627 tcacttcagcagcatttcagcaatctgaacggcattgagtgcggcgcctttacgtatctg 568

                                                                       
Query: 389 gtctccacagacaaataactccaaccctctgttatcatcttgcgacaagtcctgacggat 448
            || ||||| |||||||  |||||||||| |||| ||||  | |||||||||||||| ||
Sbjct: 567 atcaccacacacaaatatgtccaaccctcggttaccatccagggacaagtcctgacgaat 508

                                             
Query: 449 cctgccaactgatacatcatctttatccgatacc 482
           ||| || |||| ||| |||||||| || ||||||
Sbjct: 507 cctacccactgctacgtcatctttgtctgatacc 474



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 64/71 (90%)
 Strand = Plus / Minus

                                                                            
Query: 412      accctctgttatcatcttgcgacaagtcctgacggatcctgccaactgatacatcatctt 471
                ||||| ||||||||||||||||||| |||||||| || || || |||| |||||||||||
Sbjct: 31159238 accctttgttatcatcttgcgacaaatcctgacgaattctacccactgctacatcatctt 31159179

                           
Query: 472      tatccgatacc 482
                |||||||||||
Sbjct: 31159178 tatccgatacc 31159168



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                            
Query: 329      tcacttcagtagcatttcggcaatctggacagcgttcagcgccgcacctttacgtatctg 388
                |||||| ||||||||||| |||||||| ||||| || || || |||||||||||||| ||
Sbjct: 31159440 tcacttgagtagcatttcagcaatctgcacagcattgagtgcagcacctttacgtatttg 31159381

                                 
Query: 389      gtctccacagacaaata 405
                 |||||||| |||||||
Sbjct: 31159380 atctccacaaacaaata 31159364



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>gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genomic sequence, complete
             sequence
          Length = 128017

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 64/71 (90%)
 Strand = Plus / Minus

                                                                         
Query: 412   accctctgttatcatcttgcgacaagtcctgacggatcctgccaactgatacatcatctt 471
             ||||| ||||||||||||||||||| |||||||| || || || |||| |||||||||||
Sbjct: 79879 accctttgttatcatcttgcgacaaatcctgacgaattctacccactgctacatcatctt 79820

                        
Query: 472   tatccgatacc 482
             |||||||||||
Sbjct: 79819 tatccgatacc 79809



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                         
Query: 329   tcacttcagtagcatttcggcaatctggacagcgttcagcgccgcacctttacgtatctg 388
             |||||| ||||||||||| |||||||| ||||| || || || |||||||||||||| ||
Sbjct: 80081 tcacttgagtagcatttcagcaatctgcacagcattgagtgcagcacctttacgtatttg 80022

                              
Query: 389   gtctccacagacaaata 405
              |||||||| |||||||
Sbjct: 80021 atctccacaaacaaata 80005



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 64/71 (90%)
 Strand = Plus / Minus

                                                                            
Query: 412      accctctgttatcatcttgcgacaagtcctgacggatcctgccaactgatacatcatctt 471
                ||||| ||||||||||||||||||| |||||||| || || || |||| |||||||||||
Sbjct: 31249761 accctttgttatcatcttgcgacaaatcctgacgaattctacccactgctacatcatctt 31249702

                           
Query: 472      tatccgatacc 482
                |||||||||||
Sbjct: 31249701 tatccgatacc 31249691



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                            
Query: 329      tcacttcagtagcatttcggcaatctggacagcgttcagcgccgcacctttacgtatctg 388
                |||||| ||||||||||| |||||||| ||||| || || || |||||||||||||| ||
Sbjct: 31249963 tcacttgagtagcatttcagcaatctgcacagcattgagtgcagcacctttacgtatttg 31249904

                                 
Query: 389      gtctccacagacaaata 405
                 |||||||| |||||||
Sbjct: 31249903 atctccacaaacaaata 31249887



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>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome
          Length = 2575032

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                         
Query: 351    atctggacagcgttcagcgccgcacctttacgtatctggtctccacagacaaataactc 409
              ||||| || |||||||| || ||||| ||| | |||||||| ||||||||||| |||||
Sbjct: 358683 atctgaaccgcgttcagagcagcacccttaaggatctggtccccacagacaaagaactc 358741



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>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 354     tggacagcgttcagcgccgcaccttt 379
               |||||| |||||||||||||||||||
Sbjct: 4616419 tggacaccgttcagcgccgcaccttt 4616394



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>gb|AY029475.1| Rhizobium sp. NGR234 aspartate-B-semialdehyde dehydrogenase (asd)
            gene, complete cds
          Length = 2542

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 339  agcatttcggcaatctggacagcgttcagcgccgcacc 376
            |||| |||||| ||||| || |||||||||||||||||
Sbjct: 1984 agcagttcggcgatctgaacggcgttcagcgccgcacc 1947



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>gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome
          Length = 2650701

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 240     agaccaaaactgagctcaaaatgac 264
               ||||||| |||||||||||||||||
Sbjct: 1246783 agaccaatactgagctcaaaatgac 1246807



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>gb|AC121121.13| Mus musculus chromosome 9, clone RP23-401G21, complete sequence
          Length = 226672

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 136   caaaatccaaacaagcaaaaaagctcctt 164
             ||||| |||||||||||||||| ||||||
Sbjct: 72913 caaaaaccaaacaagcaaaaaacctcctt 72885



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>gb|AC121580.3| Mus musculus BAC clone RP23-255J21 from 9, complete sequence
          Length = 200282

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 136   caaaatccaaacaagcaaaaaagctcctt 164
             ||||| |||||||||||||||| ||||||
Sbjct: 35078 caaaaaccaaacaagcaaaaaacctcctt 35106



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>gb|AC121900.2| Mus musculus BAC clone RP24-167E15 from 7, complete sequence
          Length = 170266

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 33    ttatctcggtggtaaagttac 53
             |||||||||||||||||||||
Sbjct: 92483 ttatctcggtggtaaagttac 92503



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>gb|AC165251.2| Mus musculus BAC clone RP24-75C16 from chromosome 13, complete sequence
          Length = 207075

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 241    gaccaaaactgagctcaaaat 261
              |||||||||||||||||||||
Sbjct: 171860 gaccaaaactgagctcaaaat 171880



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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 344    ttcggcaatctggacagcgttcagcgccgcacc 376
              |||||| |||||||  |||||||||||||||||
Sbjct: 250499 ttcggcgatctggatcgcgttcagcgccgcacc 250531



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>gb|AC006068.4| Arabidopsis thaliana chromosome 2 clone T20F21 map ve016, complete
             sequence
          Length = 107436

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 304   acatgagacaatggtagaaag 324
             |||||||||||||||||||||
Sbjct: 90758 acatgagacaatggtagaaag 90738



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>gb|CP000027.1| Dehalococcoides ethenogenes 195, complete genome
          Length = 1469720

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                  
Query: 344    ttcggcaatctggacagcgttcagcgccgcaccttt 379
              ||||||||||||||| ||||| || ||||| |||||
Sbjct: 893256 ttcggcaatctggacggcgtttagggccgcgccttt 893221



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>gb|AC166833.4| Mus musculus BAC clone RP23-146A22 from chromosome 8, complete sequence
          Length = 200720

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 136    caaaatccaaacaagcaaaa 155
              ||||||||||||||||||||
Sbjct: 169827 caaaatccaaacaagcaaaa 169808



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>ref|XM_383600.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG03424.1)
            partial mRNA
          Length = 1644

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 347  ggcaatctggacagcgttca 366
            ||||||||||||||||||||
Sbjct: 1053 ggcaatctggacagcgttca 1034



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>emb|Z95889.1|HS211A9 Human DNA sequence from clone CTA-211A9 on chromosome 22q12.1, complete
             sequence
          Length = 117939

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 246   aaactgagctcaaaatgact 265
             ||||||||||||||||||||
Sbjct: 78985 aaactgagctcaaaatgact 78966



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>gb|AC087286.12| Homo sapiens chromosome 15, clone RP11-815J21, complete sequence
          Length = 193549

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   aaaatccaaacaagcaaaaa 156
             ||||||||||||||||||||
Sbjct: 53918 aaaatccaaacaagcaaaaa 53937



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>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome
          Length = 5205140

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 344    ttcggcaatctggacagcgttcag 367
              |||||||||||||||||| |||||
Sbjct: 470967 ttcggcaatctggacagcattcag 470990



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>gb|AC164311.4| Mus musculus BAC clone RP23-144H18 from chromosome 8, complete sequence
          Length = 190693

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   caaaatccaaacaagcaaaa 155
             ||||||||||||||||||||
Sbjct: 16429 caaaatccaaacaagcaaaa 16410



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>gb|AC099771.9| Mus Musculus Strain C57BL6/J chromosome 5 BAC, RP23-72621, Complete
              Sequence, complete sequence
          Length = 256933

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 138    aaatccaaacaagcaaaaaa 157
              ||||||||||||||||||||
Sbjct: 228618 aaatccaaacaagcaaaaaa 228599



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>gb|AC010661.8| Drosophila melanogaster 3L BAC RP98-13A12 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 163115

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 155    aaagctccttttctcaactt 174
              ||||||||||||||||||||
Sbjct: 100109 aaagctccttttctcaactt 100090



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>gb|AC109607.47| Mus musculus strain C57BL/6J clone rp23-146a22 map 8, complete sequence
          Length = 200759

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 136    caaaatccaaacaagcaaaa 155
              ||||||||||||||||||||
Sbjct: 169855 caaaatccaaacaagcaaaa 169836



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>gb|DP000024.1| Eulemur macaco macaco target 1 genomic scaffold
          Length = 1570569

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 134    ggcaaaatccaaacaagcaaaaaa 157
              |||||||||||| |||||||||||
Sbjct: 341317 ggcaaaatccaaccaagcaaaaaa 341340



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>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 344    ttcggcaatctggacagcgttcag 367
              |||||||||||||||||| |||||
Sbjct: 524392 ttcggcaatctggacagcattcag 524415



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>emb|AL445594.3|CNS07ED4 Human chromosome 14 DNA sequence BAC R-74H1 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 171409

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 155   aaagctccttttctcaactt 174
             ||||||||||||||||||||
Sbjct: 86448 aaagctccttttctcaactt 86467



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>gb|AE003565.3| Drosophila melanogaster chromosome 3L, section 20 of 83 of the complete
              sequence
          Length = 284268

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 155    aaagctccttttctcaactt 174
              ||||||||||||||||||||
Sbjct: 164096 aaagctccttttctcaactt 164077



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>emb|AL672073.8| Mouse DNA sequence from clone RP23-333P16 on chromosome X, complete
              sequence
          Length = 216812

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 136    caaaatccaaacaagcaaaa 155
              ||||||||||||||||||||
Sbjct: 202715 caaaatccaaacaagcaaaa 202696



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>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 277     atccatcaatggatagagca 296
               ||||||||||||||||||||
Sbjct: 4141123 atccatcaatggatagagca 4141104



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>gb|AC132312.4| Mus musculus BAC clone RP24-298A20 from 12, complete sequence
          Length = 177464

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 384    atctggtctccacagacaaa 403
              ||||||||||||||||||||
Sbjct: 161300 atctggtctccacagacaaa 161281



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>gb|AC132354.2| Mus musculus BAC clone RP24-112H7 from 12, complete sequence
          Length = 180298

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 384   atctggtctccacagacaaa 403
             ||||||||||||||||||||
Sbjct: 58030 atctggtctccacagacaaa 58011



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>emb|AL352981.4|CNS05TC0 Human chromosome 14 DNA sequence BAC R-15E14 of library RPCI-11 from
            chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 158214

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 155  aaagctccttttctcaactt 174
            ||||||||||||||||||||
Sbjct: 4639 aaagctccttttctcaactt 4658


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,638,437
Number of Sequences: 3902068
Number of extensions: 3638437
Number of successful extensions: 68902
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68701
Number of HSP's gapped (non-prelim): 201
length of query: 482
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 460
effective length of database: 17,147,199,772
effective search space: 7887711895120
effective search space used: 7887711895120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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