>UFO_ARATH (Q39090) UNUSUAL FLORAL ORGANS protein (F-box only protein 1)|
           (AtFBX1)
          Length = 442

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
 Frame = -2

Query: 452 KLVMVGGIAKPNRPDIIKGIGIWEL--DRTQWQEVSRMPHKFFQGFG--ELDDVFCSGGA 285
           +L++V  + K ++ ++ K + +W L  D   W E+ RMP   +  F   E    F   G 
Sbjct: 307 RLILVAAVEK-SKLNVPKSLRLWSLQQDNATWVEIERMPQPLYTQFAAEEGGKGFECVGN 365

Query: 284 DHLVYIQSYGATALLGFDMKQRQWKWSAKCPVS 186
              V I   G +  L FD+ ++ W W   CP S
Sbjct: 366 QEFVMIVLRGTSLQLLFDIVRKSWLWVPPCPYS 398

>ROM2_YEAST (P51862) RHO1 GDP-GTP exchange protein 2|
          Length = 1356

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 25/66 (37%), Positives = 31/66 (46%)
 Frame = +3

Query: 30   R*RVYHSSSTRRGSLVFVDCGQVKGTDRCKLGGNIQPRLKAKASEQLERKLFAHRAFCRP 209
            R ++ H     R  L   D G V G  +  L  N+   LKAKA      K   H+ F RP
Sbjct: 878  RRKIKHEGILSRKELSKSD-GTVVGDIQFYLLDNMLLFLKAKAVN----KWHQHKVFQRP 932

Query: 210  LPLPLL 227
            +PLPLL
Sbjct: 933  IPLPLL 938

>KBTB3_HUMAN (Q8NAB2) Kelch repeat and BTB domain-containing protein 3 (BTB and|
           kelch domain-containing protein 3)
          Length = 608

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 12/40 (30%), Positives = 26/40 (65%)
 Frame = -2

Query: 461 LREKLVMVGGIAKPNRPDIIKGIGIWELDRTQWQEVSRMP 342
           + +K+ ++GG   P+  +I   + ++  +R++W+EVS MP
Sbjct: 545 IEDKIYILGGDYAPD--EITDEVQVYHSNRSEWEEVSPMP 582

>SNF12_YEAST (P53628) Transcription regulatory protein SNF12 (SWI/SNF complex|
           component SWP73)
          Length = 566

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +3

Query: 345 HSTHLLPLCPVKLPYTDSLDDIRSIG 422
           +STHLLPL P+++ YT  +D   + G
Sbjct: 411 NSTHLLPLQPIEIDYTVRVDKASTYG 436

>KBTB3_MOUSE (Q8BHI4) Kelch repeat and BTB domain-containing protein 3 (BTB and|
           kelch domain-containing protein 3)
          Length = 607

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 12/40 (30%), Positives = 25/40 (62%)
 Frame = -2

Query: 461 LREKLVMVGGIAKPNRPDIIKGIGIWELDRTQWQEVSRMP 342
           + +K+ ++GG   P+  +I   + ++   R++W+EVS MP
Sbjct: 545 IEDKIYILGGDYAPD--EITDEVQVYHSSRSEWEEVSPMP 582

>PHNC_YERPS (Q66D26) Phosphonates import ATP-binding protein phnC (EC 3.6.3.28)|
          Length = 278

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 16/55 (29%), Positives = 24/55 (43%)
 Frame = -2

Query: 287 ADHLVYIQSYGATALLGFDMKQRQWKWSAKCPVSKKFPLQLFTGFCFEPRLDITT 123
           A  ++     G T  +     ++  KW AKC +       +F  FC  PRLD+ T
Sbjct: 79  AGEIINYHENGDTQNIAALTTKQMRKWRAKCGM-------IFQDFCLVPRLDVIT 126

>PHNC_YERPE (Q8ZGU5) Phosphonates import ATP-binding protein phnC (EC 3.6.3.28)|
          Length = 278

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 16/55 (29%), Positives = 24/55 (43%)
 Frame = -2

Query: 287 ADHLVYIQSYGATALLGFDMKQRQWKWSAKCPVSKKFPLQLFTGFCFEPRLDITT 123
           A  ++     G T  +     ++  KW AKC +       +F  FC  PRLD+ T
Sbjct: 79  AGEIINYHENGDTQNIAALTTKQMRKWRAKCGM-------IFQDFCLVPRLDVIT 126

>PRIM_STRCO (Q9S1N4) DNA primase (EC 2.7.7.-)|
          Length = 641

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
 Frame = +2

Query: 191 QGILPTTSIASASCQIQ-AKQLHHSFGCRQGGRRPRY--KIHHLT 316
           +G+ P     S S Q+  +K   H FGC++GG    +  KI HLT
Sbjct: 38  KGLCPFHDEKSPSFQVSPSKGFFHCFGCQEGGDTITFVMKIDHLT 82


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,961,638
Number of Sequences: 219361
Number of extensions: 1543896
Number of successful extensions: 3963
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3962
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 3026354448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)