>VL1_HPV27 (P36736) Major capsid protein L1|
          Length = 594

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -1

Query: 105 NDTAISSLMLEETLMLPHGGRVYLPPICFNK 13
           ND  +S++ L+  L  P+  +VYLPP   +K
Sbjct: 99  NDVNVSTISLQMALWRPNESKVYLPPTPVSK 129

>VL1_HPV2A (P25486) Major capsid protein L1|
          Length = 510

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -1

Query: 105 NDTAISSLMLEETLMLPHGGRVYLPPICFNK 13
           ND  +S++ L+  L  P+  +VYLPP   +K
Sbjct: 6   NDVNVSTISLQMALWRPNESKVYLPPTPVSK 36

>EXON_SHV21 (Q01013) Alkaline exonuclease (EC 3.1.11.-)|
          Length = 483

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -3

Query: 397 LQSFEHPLNELKAVPRVDSQGQMCGSTF 314
           L S E P+NE+  +   D Q Q+C S+F
Sbjct: 3   LFSEESPINEIGNMDMTDQQTQLCSSSF 30


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,285,181
Number of Sequences: 219361
Number of extensions: 854610
Number of successful extensions: 2528
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2528
length of database: 80,573,946
effective HSP length: 112
effective length of database: 56,005,514
effective search space used: 1344132336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)