Clone Name | rbart27e05 |
---|---|
Clone Library Name | barley_pub |
>gb|AF411228.1|AF411228 Hordeum vulgare ascorbate peroxidase mRNA, complete cds Length = 1138 Score = 141 bits (71), Expect = 4e-31 Identities = 80/83 (96%) Strand = Plus / Minus Query: 22 catttcgtcctccacagggaaaaacaaccggaaaggaactacataacacttagcggttca 81 |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1116 catttcgttctcgacagggaaaaacaaccggaaaggaactacataacacttagcggttca 1057 Query: 82 cactacaagcagggccatcacaa 104 ||||||||||||| ||||||||| Sbjct: 1056 cactacaagcaggtccatcacaa 1034
>gb|BT009090.1| Triticum aestivum clone wkm2c.pk0002.f7:fis, full insert mRNA sequence Length = 973 Score = 77.8 bits (39), Expect = 5e-12 Identities = 54/59 (91%) Strand = Plus / Minus Query: 46 caaccggaaaggaactacataacacttagcggttcacactacaagcagggccatcacaa 104 ||||||||||||||||||||||||||| || ||||| |||||||||| | ||||||||| Sbjct: 874 caaccggaaaggaactacataacacttggcagttcatactacaagcacgcccatcacaa 816
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 33 ccacagggaaaaacaaccg 51 ||||||||||||||||||| Sbjct: 1575048 ccacagggaaaaacaaccg 1575030
>gb|AC153140.5| Mus musculus BAC clone RP23-340P19 from chromosome 12, complete sequence Length = 241834 Score = 38.2 bits (19), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 37 agggaaaaacaaccggaaaggaa 59 |||||||| |||||||||||||| Sbjct: 73653 agggaaaaccaaccggaaaggaa 73675
>gb|AE009482.1| Brucella melitensis 16M chromosome I, section 39 of 195 of the complete sequence Length = 10503 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 33 ccacagggaaaaacaaccg 51 ||||||||||||||||||| Sbjct: 4957 ccacagggaaaaacaaccg 4975
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 33 ccacagggaaaaacaaccg 51 ||||||||||||||||||| Sbjct: 1592862 ccacagggaaaaacaaccg 1592844
>gb|AC151533.3| Mus musculus BAC clone RP24-92D11 from 14, complete sequence Length = 230285 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 cacactacaagcagggcca 98 ||||||||||||||||||| Sbjct: 173382 cacactacaagcagggcca 173364
>gb|AC148978.3| Mus musculus BAC clone RP23-359K8 from 14, complete sequence Length = 241799 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 cacactacaagcagggcca 98 ||||||||||||||||||| Sbjct: 22532 cacactacaagcagggcca 22514
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 33 ccacagggaaaaacaaccg 51 ||||||||||||||||||| Sbjct: 1590016 ccacagggaaaaacaaccg 1589998 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 528,897 Number of Sequences: 3902068 Number of extensions: 528897 Number of successful extensions: 31047 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 31022 Number of HSP's gapped (non-prelim): 25 length of query: 104 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 83 effective length of database: 17,151,101,840 effective search space: 1423541452720 effective search space used: 1423541452720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)