ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart27d11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 44 0.44
2gb|AC146610.4| Mus musculus BAC clone RP23-68E7 from chromosome ... 42 1.7
3gb|AC122523.5| Mus musculus BAC clone RP24-492N18 from chromosom... 42 1.7
4ref|XM_808404.1| Trypanosoma cruzi strain CL Brener mucin-associ... 42 1.7
5gb|AC155806.3| Mus musculus BAC clone RP24-308M10 from chromosom... 42 1.7
6emb|AL353681.8| Human DNA sequence from clone RP1-158P9 on chrom... 42 1.7
7gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 42 1.7
8gb|AC135782.4| Homo sapiens chromosome 16 clone CTD-2555A7, comp... 42 1.7
9ref|XM_480241.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.9
10gb|AY663543.1| Sus scrofa albumin gene, complete cds 40 6.9
11gb|AC161276.2| Pan troglodytes BAC clone CH251-520C21 from chrom... 40 6.9
12gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.9
13gb|AC140245.3| Mus musculus BAC clone RP23-293J3 from chromosome... 40 6.9
14ref|XM_807257.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 6.9
15ref|XM_797648.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 6.9
16emb|CR933563.5| Wallaby DNA sequence from clone MEKBa-325O12, co... 40 6.9
17gb|AC002127.1| Homo sapiens BAC clone CTA-305H12 from 7, complet... 40 6.9
18emb|AL391379.12| Human DNA sequence from clone RP13-171J5 on chr... 40 6.9
19emb|AL139280.8| Human DNA sequence from clone RP11-195B3 on chro... 40 6.9
20emb|AL121986.12|HSBA101J8 Human DNA sequence from clone RP11-101... 40 6.9
21emb|AL035698.12|HS69B13 Human DNA sequence from clone RP1-69B13 ... 40 6.9
22emb|AL023694.1|HS511E16 Human DNA sequence from clone RP3-511E16... 40 6.9
23emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete ... 40 6.9
24emb|BX640428.1| Bordetella parapertussis strain 12822, complete ... 40 6.9
25emb|BX640418.1| Bordetella pertussis strain Tohama I, complete g... 40 6.9
26gb|AC173914.3| Nomascus leucogenys leucogenys clone CH271-445J13... 40 6.9
27gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome 40 6.9
28emb|AL645847.15| Mouse DNA sequence from clone RP23-428I5 on chr... 40 6.9
29emb|BX901978.14| Zebrafish DNA sequence from clone DKEY-155M6 in... 40 6.9
30gb|AC091607.11| Homo sapiens 3 BAC RP11-118D22 (Roswell Park Can... 40 6.9
31gb|AC079822.13| Homo sapiens 3 BAC RP11-413G22 (Roswell Park Can... 40 6.9
32gb|AC016178.9| Homo sapiens chromosome 8, clone RP11-259L23, com... 40 6.9
33gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome 40 6.9
34gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete g... 40 6.9
35gb|AC151840.5| Mus musculus BAC clone RP23-150L19 from chromosom... 40 6.9
36dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
37dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
38dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
39gb|AC082645.13|AC082645 Oryza sativa chromosome 3 BAC OSJNBb0033... 40 6.9
40gb|AC090077.1|AC090077 Trypanosoma cruzi strain Brener clone 12A... 40 6.9
41gb|AC073881.3|AC073881 Homo sapiens chromosome 15 clone CTD-2169... 40 6.9
42gb|AC090882.10| Oryza sativa chromosome 3 BAC OSJNBa0014G15 geno... 40 6.9
43ref|XM_227313.3| PREDICTED: Rattus norvegicus similar to dachsou... 40 6.9
44gb|AC022013.3|AC022013 Homo sapiens chromosome 3 clone RP11-83C2... 40 6.9
45gb|AC018507.3|AC018507 Homo sapiens chromosome 3 clone RP11-66L1... 40 6.9
46gb|AC006440.9|AC006440 Homo sapiens chromosome 17, clone RP11-11... 40 6.9
47dbj|AP005605.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
48dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
49dbj|AP004994.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
50dbj|BS000201.1| Pan troglodytes chromosome 22 clone:PTB-047A24, ... 40 6.9
51emb|BX511200.2|RN52A6 Rattus norvegicus chromosome 1 BAC RP32-52... 40 6.9
52gb|AC005191.1|AC005191 Homo sapiens PAC clone RP1-269O5 from Xq2... 40 6.9
53gb|AY105026.1| Zea mays PCO062519 mRNA sequence 40 6.9
54gb|AC157602.8| Mus musculus chromosome 15 clone RP23-104H10, com... 40 6.9
55emb|AL671848.7| Mouse DNA sequence from clone RP23-110K5 on chro... 40 6.9
56gb|AC107884.15| Homo sapiens chromosome 11, clone CTD-2516F10, c... 40 6.9
57dbj|AP002532.1| Homo sapiens genomic DNA, chromosome 1q22-q23, C... 40 6.9
58dbj|AB045357.1| Homo sapiens genomic DNA, chromosome 1q22-q23, c... 40 6.9 
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 376     gttcttccacctcgtcgacctcgttctcgc 405
               ||||||| ||||||||||||| ||||||||
Sbjct: 2760563 gttcttcgacctcgtcgaccttgttctcgc 2760592
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>gb|AC146610.4| Mus musculus BAC clone RP23-68E7 from chromosome 7, complete sequence
          Length = 218291

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 259   ggttcaggaggcccttgaacc 279
             |||||||||||||||||||||
Sbjct: 52487 ggttcaggaggcccttgaacc 52467
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>gb|AC122523.5| Mus musculus BAC clone RP24-492N18 from chromosome 7, complete sequence
          Length = 163841

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 259    ggttcaggaggcccttgaacc 279
              |||||||||||||||||||||
Sbjct: 131891 ggttcaggaggcccttgaacc 131871
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>ref|XM_808404.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein
           (MASP) (Tc00.1047053511625.90) partial mRNA
          Length = 1002

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 417 tggtggtgctggtggaaacgt 437
           |||||||||||||||||||||
Sbjct: 369 tggtggtgctggtggaaacgt 389
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>gb|AC155806.3| Mus musculus BAC clone RP24-308M10 from chromosome 7, complete sequence
          Length = 202336

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 307    ggtgatggtggcggcggccgc 327
              |||||||||||||||||||||
Sbjct: 151073 ggtgatggtggcggcggccgc 151053
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>emb|AL353681.8| Human DNA sequence from clone RP1-158P9 on chromosome 1 Contains a
            novel gene and a pseudogene, complete sequence
          Length = 113539

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 153  aaaggtaggaaatggcagagc 173
            |||||||||||||||||||||
Sbjct: 2589 aaaggtaggaaatggcagagc 2609
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 309     tgatggtggcggcggccgcca 329
               |||||||||||||||||||||
Sbjct: 3276675 tgatggtggcggcggccgcca 3276695
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>gb|AC135782.4| Homo sapiens chromosome 16 clone CTD-2555A7, complete sequence
          Length = 163550

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 287   caccccgccctccgccccgtggtga 311
             |||||||||||||||||| ||||||
Sbjct: 55537 caccccgccctccgccccttggtga 55561
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>ref|XM_480241.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1914

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 307  ggtgatggtggcggcggccg 326
            ||||||||||||||||||||
Sbjct: 994  ggtgatggtggcggcggccg 1013
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>gb|AY663543.1| Sus scrofa albumin gene, complete cds
          Length = 35317

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 136   gaatacgaagcaaaaataaa 155
             ||||||||||||||||||||
Sbjct: 23735 gaatacgaagcaaaaataaa 23754
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>gb|AC161276.2| Pan troglodytes BAC clone CH251-520C21 from chromosome 7, complete
             sequence
          Length = 210088

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 195   acaacagattaataaccaga 214
             ||||||||||||||||||||
Sbjct: 64987 acaacagattaataaccaga 65006
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 313      ggtggcggcggccgccatgg 332
                ||||||||||||||||||||
Sbjct: 28544365 ggtggcggcggccgccatgg 28544346
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>gb|AC140245.3| Mus musculus BAC clone RP23-293J3 from chromosome 18, complete sequence
          Length = 195082

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 305    gtggtgatggtggcggcggc 324
              ||||||||||||||||||||
Sbjct: 181341 gtggtgatggtggcggcggc 181360
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>ref|XM_807257.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053506829.90) partial mRNA
          Length = 4344

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 305  gtggtgatggtggcggcggc 324
            ||||||||||||||||||||
Sbjct: 1051 gtggtgatggtggcggcggc 1032
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>ref|XM_797648.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053508077.9) partial mRNA
          Length = 1872

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 305  gtggtgatggtggcggcggc 324
            ||||||||||||||||||||
Sbjct: 1033 gtggtgatggtggcggcggc 1014
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>emb|CR933563.5| Wallaby DNA sequence from clone MEKBa-325O12, complete sequence
          Length = 179531

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 305   gtggtgatggtggcggcggc 324
             ||||||||||||||||||||
Sbjct: 79981 gtggtgatggtggcggcggc 79962
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>gb|AC002127.1| Homo sapiens BAC clone CTA-305H12 from 7, complete sequence
          Length = 144165

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 195   acaacagattaataaccaga 214
             ||||||||||||||||||||
Sbjct: 33829 acaacagattaataaccaga 33810
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>emb|AL391379.12| Human DNA sequence from clone RP13-171J5 on chromosome X Contains a CpG
             island, complete sequence
          Length = 116800

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 195   acaacagattaataaccaga 214
             ||||||||||||||||||||
Sbjct: 10780 acaacagattaataaccaga 10761
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>emb|AL139280.8| Human DNA sequence from clone RP11-195B3 on chromosome 10 Contains a
             novel gene, complete sequence
          Length = 45462

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 465   tccttgtcctgccggtggcc 484
             ||||||||||||||||||||
Sbjct: 27304 tccttgtcctgccggtggcc 27323
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>emb|AL121986.12|HSBA101J8 Human DNA sequence from clone RP11-101J8 on chromosome 1q21.2-22
             Contains the CD1A gene for CD1A antigen, a polypeptide, a
             high-mobility group nucleosome binding domain 1 (HMGN1)
             pseudogene, the CD1C gene for CD1C antigen, c polypeptide,
             the CD1B gene for CD1B antigen, b polypeptide, the CD1E
             gene for CD1E antigen, e polypeptide, the OR10T2 gene for
             olfactory receptor, family 10, subfamily T, member 2 and
             the OR10K2 gene for olfactory receptor, family 10,
             subfamily K, member 2, complete sequence
          Length = 168753

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 46    acaaagttattagaaaaaca 65
             ||||||||||||||||||||
Sbjct: 12653 acaaagttattagaaaaaca 12672
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>emb|AL035698.12|HS69B13 Human DNA sequence from clone RP1-69B13 on chromosome 6q24.1-25.2
             Contains the 3' end of the GRM1 gene for metabotropic
             glutamate receptor 1, a phosphoribosyl pyrophosphate
             synthetase (PRPS1, PRPS2) pseudogene and a CpG island,
             complete sequence
          Length = 200317

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 195   acaacagattaataaccaga 214
             ||||||||||||||||||||
Sbjct: 64430 acaacagattaataaccaga 64411
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>emb|AL023694.1|HS511E16 Human DNA sequence from clone RP3-511E16 on chromosome 6p24.3-25.1
             Contains the 3' end of the EEF1E1 gene for eukaryotic
             translation elongation factor 1 epsilon 1, the 5' end of
             gene FLJ21789 for the ortholog of mouse muted and a CpG
             island, complete sequence
          Length = 56632

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 195   acaacagattaataaccaga 214
             ||||||||||||||||||||
Sbjct: 44667 acaacagattaataaccaga 44648
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>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16
          Length = 349442

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 466    ccttgtcctgccggtggccg 485
              ||||||||||||||||||||
Sbjct: 173188 ccttgtcctgccggtggccg 173207
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>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14
          Length = 348525

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 466   ccttgtcctgccggtggccg 485
             ||||||||||||||||||||
Sbjct: 64931 ccttgtcctgccggtggccg 64912
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>emb|BX640418.1| Bordetella pertussis strain Tohama I, complete genome; segment 8/12
          Length = 349346

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 466   ccttgtcctgccggtggccg 485
             ||||||||||||||||||||
Sbjct: 48790 ccttgtcctgccggtggccg 48809
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>gb|AC173914.3| Nomascus leucogenys leucogenys clone CH271-445J13, complete sequence
          Length = 188657

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 195  acaacagattaataaccaga 214
            ||||||||||||||||||||
Sbjct: 9081 acaacagattaataaccaga 9062
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>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome
          Length = 3665893

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 327   ccatgggtgaagctccttct 346
             ||||||||||||||||||||
Sbjct: 58373 ccatgggtgaagctccttct 58354
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>emb|AL645847.15| Mouse DNA sequence from clone RP23-428I5 on chromosome 11 Contains the
             3' end of the Trim16 gene for tripartite motif protein 16,
             the gene for a novel WD domain, G-beta repeat domain
             containing protein, the gene for the ortholog of human
             family with sequence similarity 18 member B FAM18B, a
             novel gene and the 5' end of a novel gene, complete
             sequence
          Length = 124933

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 359   gcccagcttcctagccagtt 378
             ||||||||||||||||||||
Sbjct: 76439 gcccagcttcctagccagtt 76420
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>emb|BX901978.14| Zebrafish DNA sequence from clone DKEY-155M6 in linkage group 18,
             complete sequence
          Length = 168101

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 94    acaaataaactaacacataa 113
             ||||||||||||||||||||
Sbjct: 84833 acaaataaactaacacataa 84852
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>gb|AC091607.11| Homo sapiens 3 BAC RP11-118D22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 175447

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 195    acaacagattaataaccaga 214
              ||||||||||||||||||||
Sbjct: 156968 acaacagattaataaccaga 156949
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>gb|AC079822.13| Homo sapiens 3 BAC RP11-413G22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 181672

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 46    acaaagttattagaaaaaca 65
             ||||||||||||||||||||
Sbjct: 66454 acaaagttattagaaaaaca 66473
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>gb|AC016178.9| Homo sapiens chromosome 8, clone RP11-259L23, complete sequence
          Length = 171035

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 195   acaacagattaataaccaga 214
             ||||||||||||||||||||
Sbjct: 31442 acaacagattaataaccaga 31461
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>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome
          Length = 2679306

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 304    cgtggtgatggtggcggcgg 323
              ||||||||||||||||||||
Sbjct: 288800 cgtggtgatggtggcggcgg 288819
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>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 132    tgtggaatacgaagcaaaaataaa 155
              |||||||| |||||||||||||||
Sbjct: 211179 tgtggaatgcgaagcaaaaataaa 211202
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>gb|AC151840.5| Mus musculus BAC clone RP23-150L19 from chromosome 18, complete
             sequence
          Length = 197898

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 305   gtggtgatggtggcggcggc 324
             ||||||||||||||||||||
Sbjct: 60775 gtggtgatggtggcggcggc 60794
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 307     ggtgatggtggcggcggccg 326
               ||||||||||||||||||||
Sbjct: 3797540 ggtgatggtggcggcggccg 3797559
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 305     gtggtgatggtggcggcggc 324
               ||||||||||||||||||||
Sbjct: 7166033 gtggtgatggtggcggcggc 7166052
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 313      ggtggcggcggccgccatgg 332
                ||||||||||||||||||||
Sbjct: 28635689 ggtggcggcggccgccatgg 28635670
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>gb|AC082645.13|AC082645 Oryza sativa chromosome 3 BAC OSJNBb0033N16 genomic sequence, complete
              sequence
          Length = 143681

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 313    ggtggcggcggccgccatgg 332
              ||||||||||||||||||||
Sbjct: 138495 ggtggcggcggccgccatgg 138476
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>gb|AC090077.1|AC090077 Trypanosoma cruzi strain Brener clone 12A5, complete sequence
          Length = 13998

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 305   gtggtgatggtggcggcggc 324
             ||||||||||||||||||||
Sbjct: 12686 gtggtgatggtggcggcggc 12667
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>gb|AC073881.3|AC073881 Homo sapiens chromosome 15 clone CTD-2169K18 map 15q21.3, complete
             sequence
          Length = 125463

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 195   acaacagattaataaccaga 214
             ||||||||||||||||||||
Sbjct: 49974 acaacagattaataaccaga 49993
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>gb|AC090882.10| Oryza sativa chromosome 3 BAC OSJNBa0014G15 genomic sequence, complete
              sequence
          Length = 158839

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 313    ggtggcggcggccgccatgg 332
              ||||||||||||||||||||
Sbjct: 154531 ggtggcggcggccgccatgg 154550
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>ref|XM_227313.3| PREDICTED: Rattus norvegicus similar to dachsous 2 isoform 1
            (LOC310550), mRNA
          Length = 10701

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 416  gtggtggtgctggtggaaac 435
            ||||||||||||||||||||
Sbjct: 7798 gtggtggtgctggtggaaac 7817
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>gb|AC022013.3|AC022013 Homo sapiens chromosome 3 clone RP11-83C2 map 3, complete sequence
          Length = 169258

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 195    acaacagattaataaccaga 214
              ||||||||||||||||||||
Sbjct: 134609 acaacagattaataaccaga 134628
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>gb|AC018507.3|AC018507 Homo sapiens chromosome 3 clone RP11-66L17 map 3, complete sequence
          Length = 173728

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 195    acaacagattaataaccaga 214
              ||||||||||||||||||||
Sbjct: 166290 acaacagattaataaccaga 166309
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>gb|AC006440.9|AC006440 Homo sapiens chromosome 17, clone RP11-115N5, complete sequence
          Length = 169960

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 195   acaacagattaataaccaga 214
             ||||||||||||||||||||
Sbjct: 95392 acaacagattaataaccaga 95373
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>dbj|AP005605.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1449_C01
          Length = 192857

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 307   ggtgatggtggcggcggccg 326
             ||||||||||||||||||||
Sbjct: 62757 ggtgatggtggcggcggccg 62776
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>dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0068B06
          Length = 143712

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 305   gtggtgatggtggcggcggc 324
             ||||||||||||||||||||
Sbjct: 43444 gtggtgatggtggcggcggc 43463
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>dbj|AP004994.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OSJNBa0052G07
          Length = 156207

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 305  gtggtgatggtggcggcggc 324
            ||||||||||||||||||||
Sbjct: 1037 gtggtgatggtggcggcggc 1056
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>dbj|BS000201.1| Pan troglodytes chromosome 22 clone:PTB-047A24, map 22, complete
             sequences
          Length = 165662

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 143   aagcaaaaataaaggtaggaaatg 166
             |||||||||||| |||||||||||
Sbjct: 84632 aagcaaaaataatggtaggaaatg 84655
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>emb|BX511200.2|RN52A6 Rattus norvegicus chromosome 1 BAC RP32-52A6, complete sequence
          Length = 150951

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   caaaaataaaggtaggaaat 165
             ||||||||||||||||||||
Sbjct: 85783 caaaaataaaggtaggaaat 85764
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>gb|AC005191.1|AC005191 Homo sapiens PAC clone RP1-269O5 from Xq23, complete sequence
          Length = 185893

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 195   acaacagattaataaccaga 214
             ||||||||||||||||||||
Sbjct: 99392 acaacagattaataaccaga 99373
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>gb|AY105026.1| Zea mays PCO062519 mRNA sequence
          Length = 1503

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 250  tctagaatcggttcaggaggcccttgaaccag 281
            ||||||| ||||||| ||||||||||| ||||
Sbjct: 1086 tctagaaccggttcatgaggcccttgatccag 1055
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>gb|AC157602.8| Mus musculus chromosome 15 clone RP23-104H10, complete sequence
          Length = 211648

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 208   aaccagagtaaatcaaccag 227
             ||||||||||||||||||||
Sbjct: 33991 aaccagagtaaatcaaccag 34010
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>emb|AL671848.7| Mouse DNA sequence from clone RP23-110K5 on chromosome X, complete
             sequence
          Length = 190964

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 95    caaataaactaacacataaa 114
             ||||||||||||||||||||
Sbjct: 66655 caaataaactaacacataaa 66636
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>gb|AC107884.15| Homo sapiens chromosome 11, clone CTD-2516F10, complete sequence
          Length = 177416

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 150    aataaaggtaggaaatggcagagc 173
              ||||||||||| ||||||||||||
Sbjct: 126500 aataaaggtagtaaatggcagagc 126523
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>dbj|AP002532.1| Homo sapiens genomic DNA, chromosome 1q22-q23, CD1 region, section 1/4
          Length = 300000

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 46    acaaagttattagaaaaaca 65
             ||||||||||||||||||||
Sbjct: 91382 acaaagttattagaaaaaca 91401
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>dbj|AB045357.1| Homo sapiens genomic DNA, chromosome 1q22-q23, clone:893n23, complete
             sequence
          Length = 132131

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 46    acaaagttattagaaaaaca 65
             ||||||||||||||||||||
Sbjct: 91382 acaaagttattagaaaaaca 91401


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,391,973
Number of Sequences: 3902068
Number of extensions: 4391973
Number of successful extensions: 97850
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97269
Number of HSP's gapped (non-prelim): 581
length of query: 509
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 487
effective length of database: 17,147,199,772
effective search space: 8350686288964
effective search space used: 8350686288964
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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