Clone Name | rbart27d10 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | TA2R8_PAPHA (Q646G4) Taste receptor type 2 member 8 (T2R8) | 31 | 1.8 | 2 | CT2NL_MOUSE (Q99LJ0) CTTNBP2 N-terminal-like protein | 30 | 3.1 | 3 | SPP2_NEUCR (Q7SBU7) Pre-mRNA-splicing factor spp-2 | 30 | 4.0 | 4 | TIP60_DROME (Q960X4) Histone acetyltransferase Tip60 (EC 2.3.1.48) | 29 | 6.8 | 5 | TR150_HUMAN (Q9Y2W1) Thyroid hormone receptor-associated protein... | 29 | 6.8 | 6 | FILA_HUMAN (P20930) Filaggrin | 28 | 8.9 |
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>TA2R8_PAPHA (Q646G4) Taste receptor type 2 member 8 (T2R8)| Length = 309 Score = 30.8 bits (68), Expect = 1.8 Identities = 15/48 (31%), Positives = 29/48 (60%), Gaps = 1/48 (2%) Frame = -3 Query: 145 LSAFDCRVCALLFARICLVSACVVD-VRVIMYCCLYAFVEI*RVLLNF 5 +S DC + L+ +RICL+S VV+ + +++Y +Y ++ V+ F Sbjct: 41 ISTIDCILTNLVISRICLISVMVVNGIVIVLYPDVYTKTKLQIVICTF 88
>CT2NL_MOUSE (Q99LJ0) CTTNBP2 N-terminal-like protein| Length = 638 Score = 30.0 bits (66), Expect = 3.1 Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 5/57 (8%) Frame = +1 Query: 229 EETAPPRWRTALS*LTKPMNQKSC----ASTVTMWMHL-SGGLSLAVTGSTAASLAS 384 E PPR ++A++ KP+ C + VTM HL S G SL+ + + ++SL S Sbjct: 369 ENQGPPREKSAVAAQEKPVENGGCPVGTETPVTMPSHLPSSGSSLSPSSTASSSLTS 425
>SPP2_NEUCR (Q7SBU7) Pre-mRNA-splicing factor spp-2| Length = 358 Score = 29.6 bits (65), Expect = 4.0 Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 3/81 (3%) Frame = +1 Query: 94 NRSAQKAEHTHGNQKQRATD--TRTRRQSADHSXXXXXXXXXPWCCDE-ETAPPRWRTAL 264 NRS + H + + + D +R+RR+S S P E ETAPP+W + Sbjct: 114 NRSQDRDRHNNRSSRPSRDDDASRSRRRSTSRSRDRDHKPKDPKDLQEPETAPPKWGLTI 173 Query: 265 S*LTKPMNQKSCASTVTMWMH 327 N KS + + + H Sbjct: 174 -------NPKSTTTATSSFHH 187
>TIP60_DROME (Q960X4) Histone acetyltransferase Tip60 (EC 2.3.1.48)| Length = 541 Score = 28.9 bits (63), Expect = 6.8 Identities = 15/41 (36%), Positives = 18/41 (43%) Frame = +1 Query: 34 QKRIDNNT*SHGHPLHKHSLNRSAQKAEHTHGNQKQRATDT 156 QKRI+ +HG H H S Q+ H H Q T T Sbjct: 171 QKRINRKRKNHGGSAHGHHSLTSQQQQSHPHPTTPQTPTAT 211
>TR150_HUMAN (Q9Y2W1) Thyroid hormone receptor-associated protein 3 (Thyroid| hormone receptor-associated protein complex 150 kDa component) (Trap150) Length = 955 Score = 28.9 bits (63), Expect = 6.8 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +1 Query: 85 HSLNRSAQKAEHTHGNQKQRATDTRTRRQSADHS 186 HS RSA+K E TH K++ R R +S S Sbjct: 748 HSRERSAEKTEKTHKGSKKQKKHRRARDRSRSSS 781
>FILA_HUMAN (P20930) Filaggrin| Length = 4061 Score = 28.5 bits (62), Expect = 8.9 Identities = 13/53 (24%), Positives = 24/53 (45%) Frame = +1 Query: 28 FRQKRIDNNT*SHGHPLHKHSLNRSAQKAEHTHGNQKQRATDTRTRRQSADHS 186 + ++ +D + S H H H+ ++ A H + + +TR QS D S Sbjct: 3773 YHEQSVDRSGHSGSH--HSHTTSQGRSDASHGQSGSRSASRETRNEEQSGDGS 3823 Score = 28.5 bits (62), Expect = 8.9 Identities = 12/41 (29%), Positives = 17/41 (41%) Frame = +1 Query: 64 HGHPLHKHSLNRSAQKAEHTHGNQKQRATDTRTRRQSADHS 186 H H H+ ++ A H H + + TR QS D S Sbjct: 2487 HSGSHHSHTTSQGRSDASHGHSGSRSASRQTRNDEQSGDGS 2527 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,144,033 Number of Sequences: 219361 Number of extensions: 772588 Number of successful extensions: 2715 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2628 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2709 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)