>AIRE_MOUSE (Q9Z0E3) Autoimmune regulator (Autoimmune polyendocrinopathy|
           candidiasis ectodermal dystrophy protein homolog)
           (APECED protein homolog)
          Length = 552

 Score = 32.3 bits (72), Expect = 0.81
 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = -1

Query: 517 VRSSPCEVRLKFREEQK-GQESGDQGLLHLPRAIRLSLKRQDRPRAEEAEYKS*CSVCAD 341
           VR+   +V +  R+EQK GQ+ G   L  LP   +++ K +D            C+VC D
Sbjct: 258 VRAKGAQVTIPGRDEQKVGQQCGVPPLPSLPSEPQVNQKNEDE-----------CAVCHD 306

Query: 340 GGQ 332
           GG+
Sbjct: 307 GGE 309

>KPCD1_MOUSE (Q62101) Serine/threonine-protein kinase D1 (EC 2.7.11.13)|
           (nPKC-D1) (Protein kinase D) (Protein kinase C mu type)
           (nPKC-mu)
          Length = 918

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -1

Query: 463 QESGDQGLLHLPRAIRLSLKRQDRPRAEEAEYKS 362
           Q +G+QGL +    I LS    D P AEE E K+
Sbjct: 877 QYAGEQGLQYPAHLISLSASHSDSPEAEEREMKA 910

>EXO1_XENLA (Q9W6K2) Exonuclease 1 (EC 3.1.-.-) (Exonuclease I)|
          Length = 734

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -2

Query: 459 RAAIKASSIFPEPSGSASKGKIDLALKRRNI 367
           +A+    S FPEP GSA K K+   LK +++
Sbjct: 652 KASPAHQSFFPEPKGSAPKSKVPGLLKSQSV 682


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,714,808
Number of Sequences: 219361
Number of extensions: 1121179
Number of successful extensions: 2703
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2703
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3985467738
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)