>Y4597_ARATH (P0C042) Hypothetical protein At4g15970|
          Length = 367

 Score = 78.2 bits (191), Expect = 1e-14
 Identities = 36/89 (40%), Positives = 51/89 (57%)
 Frame = -1

Query: 480 EVFEAIKGEFVAGELQIKLVFLDTVLFDGFCEYHGEMDRVCTMHANCCLRLGTKMHDLRN 301
           +V + IKG     ++ +K+ FLDT  F GFCE   ++D+VCTMHANCC+ L  K+ DLR 
Sbjct: 222 DVLDQIKGGGYPAKIGLKMRFLDTKYFGGFCEPSRDLDKVCTMHANCCVGLENKIKDLRQ 281

Query: 300 VVADWKKYSNLTPPEKMSSKLRWTYPAKC 214
           V+ DW+ Y +          + W  P  C
Sbjct: 282 VIVDWENYVSAAKTTD-GQIMTWRDPENC 309

>CAPP_CHRVO (Q7P206) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)|
           (PEPC)
          Length = 898

 Score = 33.5 bits (75), Expect = 0.30
 Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = -3

Query: 451 RRRRAADKAG-VPRYGALRRLLRVPRRDGQGVHDARQLLPQAR 326
           RRRRA   AG  P+ G+L R L+  R+DG   H   QLL  A+
Sbjct: 84  RRRRAHQLAGSAPQQGSLPRALQRLRQDGVSFHALHQLLSHAK 126

>IE63_PRVKA (Q85232) Transcriptional regulator IE63 homolog (Protein UL54)|
          Length = 361

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = -3

Query: 415 RYGALRRLLRVPRRDGQGVHDARQLLPQAR---DQDARPQERGRRLEKVLEPD 266
           R GA+RR     RR G+G   ARQ L Q R    Q  R Q+  RR ++   PD
Sbjct: 40  RLGAIRR-----RRGGRGGRAARQALRQRRRQQQQQQRQQQHQRRRQEADRPD 87

>NPAS1_MOUSE (P97459) Neuronal PAS domain protein 1 (Neuronal PAS1)|
          Length = 594

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = -3

Query: 355 DARQLLPQARDQDARPQERGRRLEKVLEPDAA--GEDEQQTQVDVP 224
           D +Q +P  +D+D  PQ RG+R++    P  A   ED  + ++  P
Sbjct: 445 DGKQAVPADQDKDKDPQARGKRIKVEASPKEARGSEDSGEEELSDP 490

>DHX34_HUMAN (Q14147) Probable ATP-dependent RNA helicase DHX34 (EC 3.6.1.-)|
           (DEAH box protein 34)
          Length = 576

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -2

Query: 353 CTPTAASGSGPRCTTSGTWSP 291
           CTP A+S + PRC T  +W P
Sbjct: 544 CTPPASSLAAPRCCTHRSWRP 564

>MFAP1_MOUSE (Q9CQU1) Microfibrillar-associated protein 1|
          Length = 439

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 24/95 (25%)
 Frame = -3

Query: 433 DKAGVPRYGALRRLLRVPRRDGQGVHDARQLLPQARDQDARPQE---------RGRRLE- 284
           +K  V RY + +R    P        +  Q + +A++Q+A P+E         R RRL+ 
Sbjct: 32  EKVKVKRYVSGKRPDYAPMESSDEEDEEFQFIKKAKEQEAEPEEQEEDSSSDPRLRRLQN 91

Query: 283 --------------KVLEPDAAGEDEQQTQVDVPR 221
                         K++EP+  GE + + + D  R
Sbjct: 92  RISEDVEERLARHRKIVEPEVVGESDSEVEGDAWR 126

>MFAP1_HUMAN (P55081) Microfibrillar-associated protein 1|
          Length = 439

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 24/95 (25%)
 Frame = -3

Query: 433 DKAGVPRYGALRRLLRVPRRDGQGVHDARQLLPQARDQDARPQE---------RGRRLE- 284
           +K  V RY + +R    P        +  Q + +A++Q+A P+E         R RRL+ 
Sbjct: 32  EKVKVKRYVSGKRPDYAPMESSDEEDEEFQFIKKAKEQEAEPEEQEEDSSSDPRLRRLQN 91

Query: 283 --------------KVLEPDAAGEDEQQTQVDVPR 221
                         K++EP+  GE + + + D  R
Sbjct: 92  RISEDVEERLARHRKIVEPEVVGESDSEVEGDAWR 126

>FMN_CHICK (Q05858) Formin (Limb deformity protein)|
          Length = 1213

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = -3

Query: 388 RVPRRDGQGVHDARQLLPQARDQDARPQERGRRLEKVLEPDAAGEDE 248
           R  R D  GV D+     ++   D      G R E  LEP+ AG++E
Sbjct: 70  RYERNDNDGVDDSENQHCESCTSDQADPMSGSRAEPELEPEPAGQNE 116

>FBLI1_MOUSE (Q71FD7) Filamin-binding LIM protein 1 (CSX-associated LIM)|
          Length = 375

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = -2

Query: 350 TPTAASGSGPRCTTSGTWSPTGKSXXXXXXXXX*AANSGGRTPP 219
           TP AA G  P+     TW+P+GK+           +N G   PP
Sbjct: 50  TPGAAVGRSPK-----TWTPSGKTNASLSGVTPQLSNGGCSLPP 88

>DB116_PANTR (Q30KL1) Beta-defensin 116 precursor (Defensin, beta 116)|
          Length = 102

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
 Frame = -1

Query: 405 LFDGFC-----EYHGEMDRVCTMHANCCLRLGTKMHDLRNVVADWKKYSNLT 265
           L+ G C     EY  +    C     CCL+L  K+   +NV  D+   SNL+
Sbjct: 42  LYQGMCRNACREYEIQY-LTCPNDQKCCLKLSVKITSSKNVKEDYDSNSNLS 92

>DB116_HUMAN (Q30KQ4) Beta-defensin 116 precursor (Defensin, beta 116)|
           (Beta-defensin 16) (DEFB-16)
          Length = 102

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
 Frame = -1

Query: 405 LFDGFC-----EYHGEMDRVCTMHANCCLRLGTKMHDLRNVVADWKKYSNLT 265
           L+ G C     EY  +    C     CCL+L  K+   +NV  D+   SNL+
Sbjct: 42  LYQGMCRNACREYEIQY-LTCPNDQKCCLKLSVKITSSKNVKEDYDSNSNLS 92

>UTP20_HUMAN (O75691) Small subunit processome component 20 homolog|
            (Down-regulated in metastasis protein) (Protein Key-1A6)
            (Novel nucleolar protein 73) (NNP73)
          Length = 2785

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = -3

Query: 340  LPQARDQDARPQERGRRLEKVLEPDAAGEDEQQTQVDVPRQVCGYDENT 194
            L  A  QD R + +G   E++ E  AAG+DE+  +  VP+      + T
Sbjct: 859  LQVAPTQDLRRKGKGMVAEEIEEEPAAGDDEELEEEAVPQDESSQKKKT 907

>FOXP1_MOUSE (P58462) Forkhead box protein P1 (Forkhead-related transcription|
           factor 1)
          Length = 705

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 23/84 (27%), Positives = 41/84 (48%)
 Frame = -3

Query: 460 GRVRRRRAADKAGVPRYGALRRLLRVPRRDGQGVHDARQLLPQARDQDARPQERGRRLEK 281
           G +R  R+  +A     GA   L  V ++  Q +  ARQLL Q + Q  + Q++ ++ ++
Sbjct: 30  GALRDTRSNGEAPAVDLGAAD-LAHVQQQQQQALQVARQLLLQQQQQQQQQQQQQQQQQQ 88

Query: 280 VLEPDAAGEDEQQTQVDVPRQVCG 209
             +     + +QQ Q    +QV G
Sbjct: 89  --QQQQQQQQQQQQQQQQQQQVSG 110


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,175,085
Number of Sequences: 219361
Number of extensions: 1148708
Number of successful extensions: 3734
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3731
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)