ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbart27d03 |
|---|---|
| Clone Library Name | barley_pub |
>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog) (XIP-I protein) Length = 304 Score = 269 bits (688), Expect = 3e-72 Identities = 121/129 (93%), Positives = 125/129 (96%) Frame = -3 Query: 514 HNIRGGPGKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDNGCNQNFGWEGSW 335 HNIRGGPGKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESD CNQN GWEGSW Sbjct: 176 HNIRGGPGKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDKWCNQNLGWEGSW 235 Query: 334 NEWTAAYPATRFYVGLTADDKSYQWVHPKNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTN 155 ++WTAAYPATRFYVGLTADDKS+QWVHPKNVYY VAPV+QKKDNYGGIMLWDRYFDKQTN Sbjct: 236 DKWTAAYPATRFYVGLTADDKSHQWVHPKNVYYGVAPVAQKKDNYGGIMLWDRYFDKQTN 295 Query: 154 YSSLIKYYA 128 YSSLIKYYA Sbjct: 296 YSSLIKYYA 304
>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog a) (RIXI protein) Length = 304 Score = 112 bits (280), Expect = 6e-25 Identities = 59/126 (46%), Positives = 77/126 (61%), Gaps = 6/126 (4%) Frame = -3 Query: 487 PLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDNGCNQNF----GWEGSWNEWTA 320 P+ LTATVRC +P + +AL T +FER+HVR Y+ D C+ N G WN+WTA Sbjct: 181 PVRLTATVRCAFPDP-RMKKALDTKLFERIHVRFYD-DATCSYNHAGLAGVMAQWNKWTA 238 Query: 319 AYPATRFYVGLTADDK--SYQWVHPKNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTNYSS 146 YP + Y+GL A + V K +YY + P QK NYGGIMLWDR++DKQT Y Sbjct: 239 RYPGSHVYLGLAAANVPGKNDNVFIKQLYYDLLPNVQKAKNYGGIMLWDRFYDKQTGYGK 298 Query: 145 LIKYYA 128 +KY+A Sbjct: 299 TVKYWA 304
>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III| chitinase homolog h) Length = 290 Score = 96.7 bits (239), Expect = 3e-20 Identities = 46/111 (41%), Positives = 70/111 (63%), Gaps = 1/111 (0%) Frame = -3 Query: 478 LTATVRCGYPPAAHVGRALATGIFERVHVRTYESDNGCNQNFGWEGSWNEWTAAYPATRF 299 LTAT RC YP + +ALATG+F R+HVR + D C + + SW +W AA+P ++ Sbjct: 181 LTATTRCSYPDH-RLEKALATGVFARIHVRMF-GDEQCTMSPRY--SWEKWAAAFPGSKV 236 Query: 298 YVGLTAD-DKSYQWVHPKNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTNYS 149 Y+GL A ++ W+ K++YY + + NYGG+ ++DRYFDK+ NY+ Sbjct: 237 YIGLVASPEQDSAWMFQKDLYYEMLQFVRSLPNYGGLAIYDRYFDKKANYT 287
>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 301 Score = 75.9 bits (185), Expect = 6e-14 Identities = 46/125 (36%), Positives = 70/125 (56%), Gaps = 6/125 (4%) Frame = -3 Query: 493 GKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDNGCNQNFGWEG----SWNEW 326 G+ ++LTA +C +P G AL TG+F+ V V+ Y + C + G SWN W Sbjct: 176 GRKVYLTAAPQCPFPDKVP-GTALNTGLFDYVWVQFYNNPP-CQYSSGNTNNLLNSWNRW 233 Query: 325 TAAYPATRFYVGLTADDKSY-QWVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNY 152 T++ +T ++GL A + + P NV S + PV ++ YGG+MLW +Y+D Q+ Y Sbjct: 234 TSSINSTGSFMGLPASSAAAGRGFIPANVLTSQILPVIKRSPKYGGVMLWSKYYDDQSGY 293 Query: 151 SSLIK 137 SS IK Sbjct: 294 SSSIK 298
>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)| Length = 294 Score = 74.3 bits (181), Expect = 2e-13 Identities = 52/131 (39%), Positives = 70/131 (53%), Gaps = 9/131 (6%) Frame = -3 Query: 502 GGPGKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDN----GCNQNFGWEGSW 335 G GK L+LTA +C +P G AL TG+F+ V V+ Y + ++NF + W Sbjct: 168 GQQGKKLYLTAAPQCPFPDKLLNG-ALQTGLFDYVWVQFYNNPECEFMSNSENF--KRRW 224 Query: 334 NEWTAAYPATRFYVGL----TADDKSYQWVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYF 170 N+WT+ PA + Y+GL TA Y PK V S V P + YGG+MLW+R F Sbjct: 225 NQWTSI-PAKKLYIGLPAAKTAAGNGYI---PKQVLMSQVLPFLKGSSKYGGVMLWNRKF 280 Query: 169 DKQTNYSSLIK 137 D Q YSS I+ Sbjct: 281 DVQCGYSSAIR 291
>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);| Lysozyme (EC 3.2.1.17)] Length = 311 Score = 72.4 bits (176), Expect = 7e-13 Identities = 42/124 (33%), Positives = 68/124 (54%), Gaps = 6/124 (4%) Frame = -3 Query: 493 GKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDNGCNQNFG----WEGSWNEW 326 GK ++LTA +C +P ++G AL TG+F+ V V+ Y + C + G SWN W Sbjct: 174 GKKVYLTAAPQCPFPDR-YLGTALNTGLFDYVWVQFYNNPP-CQYSSGNINNIINSWNRW 231 Query: 325 TAAYPATRFYVGLTADDKSYQ--WVHPKNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTNY 152 T + A + ++GL A ++ +V P + + P +K YGG+MLW +++D + Y Sbjct: 232 TTSINAGKIFLGLPAAPEAAGSGYVPPDVLISRILPEIKKSPKYGGVMLWSKFYDDKNGY 291 Query: 151 SSLI 140 SS I Sbjct: 292 SSSI 295
>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 293 Score = 68.9 bits (167), Expect = 8e-12 Identities = 44/132 (33%), Positives = 73/132 (55%), Gaps = 8/132 (6%) Frame = -3 Query: 508 IRGGPGKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYES-----DNGCNQNFGWE 344 + G + ++L+A +C YP A H+ A+ TG+F+ V V+ Y + NG N Sbjct: 163 LNGFSQQKVYLSAAPQCPYPDA-HLDSAIQTGLFDYVWVQFYNNPQCQYSNGNINNL--V 219 Query: 343 GSWNEWTAAYPATRFYVGLTADDKSYQ--WVHPKNVYYS-VAPVSQKKDNYGGIMLWDRY 173 +WN+WT++ A + ++G+ A D + + P +V S V P + YGG+M+WDR+ Sbjct: 220 NAWNQWTSSQ-AKQVFLGVPASDAAAPSGGLIPADVLTSQVLPAIKTSPKYGGVMIWDRF 278 Query: 172 FDKQTNYSSLIK 137 D Q+ YS+ IK Sbjct: 279 NDAQSGYSNAIK 290
>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 302 Score = 68.2 bits (165), Expect = 1e-11 Identities = 39/125 (31%), Positives = 67/125 (53%), Gaps = 7/125 (5%) Frame = -3 Query: 493 GKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYES-----DNGCNQNFGWEGSWNE 329 G+ ++LT +C +P +G AL T F+ V ++ Y + +G QN SWN+ Sbjct: 177 GRKIYLTGAPQCPFPDRL-MGSALNTKRFDYVWIQFYNNPPCSYSSGNTQNLF--DSWNK 233 Query: 328 WTAAYPATRFYVGLTADDKSYQ--WVHPKNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTN 155 WT + A +F++GL A ++ ++ P + + P +K YGG+MLW +++D + Sbjct: 234 WTTSIAAQKFFLGLPAAPEAAGSGYIPPDVLTSQILPTLKKSRKYGGVMLWSKFWDDKNG 293 Query: 154 YSSLI 140 YSS I Sbjct: 294 YSSSI 298
>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 292 Score = 62.4 bits (150), Expect = 7e-10 Identities = 45/123 (36%), Positives = 64/123 (52%), Gaps = 9/123 (7%) Frame = -3 Query: 478 LTATVRCGYPPAAHVGRALATGIFERVHVRTYES------DNGCNQNFGWEGSWNEWTAA 317 L+A +C P A H+ A+ TG+F+ V V+ Y + DN N SWN+WTA Sbjct: 174 LSAAPQCPIPDA-HLDAAIKTGLFDSVWVQFYNNPPCMFADNADNLL----SSWNQWTA- 227 Query: 316 YPATRFYVGLTADDKSYQ--WVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYSS 146 +P ++ Y+GL A ++ P +V S V P + NYGG+MLW + FD YS Sbjct: 228 FPTSKLYMGLPAAREAAPSGGFIPADVLISQVLPTIKASSNYGGVMLWSKAFD--NGYSD 285 Query: 145 LIK 137 IK Sbjct: 286 SIK 288
>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 298 Score = 61.6 bits (148), Expect = 1e-09 Identities = 44/126 (34%), Positives = 65/126 (51%), Gaps = 6/126 (4%) Frame = -3 Query: 499 GPGKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDNGCNQNFGWEG----SWN 332 G L LTA +C P A H+ A+ TG+F+ V V+ Y + C + G SWN Sbjct: 172 GFNSQLLLTAAPQCPIPDA-HLDTAIKTGLFDIVWVQFYNNPP-CQYSSGNTNDLISSWN 229 Query: 331 EWTAAYPATRFYVGLTADDKSY-QWVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQT 158 +WT++ A + ++G+ A + P +V S V P + YGG+MLWDR+ D Q+ Sbjct: 230 QWTSSQ-AKQLFLGVPASTAAAGSGFIPADVLTSQVLPTIKGSSKYGGVMLWDRFNDGQS 288 Query: 157 NYSSLI 140 YS I Sbjct: 289 GYSGAI 294
>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)| Length = 293 Score = 56.6 bits (135), Expect = 4e-08 Identities = 41/123 (33%), Positives = 65/123 (52%), Gaps = 5/123 (4%) Frame = -3 Query: 490 KPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDNGCNQNFGWEG---SWNEWTA 320 K ++L+A +C P A+ + A+ATG+F+ V V+ Y + C + + SWN+WT Sbjct: 173 KTVYLSAAPQCPLPDAS-LSTAIATGLFDYVWVQFYNNPP-CQYDTSADNLLSSWNQWTT 230 Query: 319 AYPATRFYVGLTAD-DKSYQWVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYSS 146 A + ++GL A D + P + S V P + YGG+MLW + +D + YSS Sbjct: 231 VQ-ANQIFLGLPASTDAAGSGFIPADALTSQVLPTIKGSAKYGGVMLWSKAYD--SGYSS 287 Query: 145 LIK 137 IK Sbjct: 288 AIK 290
>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 291 Score = 55.1 bits (131), Expect = 1e-07 Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 6/124 (4%) Frame = -3 Query: 490 KPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDNGCNQNFG----WEGSWNEWT 323 + ++LTA +C +P G AL+TG+F+ V V+ Y + C + G + WN+W Sbjct: 170 RKVYLTAAPQCPFPDTWLNG-ALSTGLFDYVWVQFYNNPP-CQYSGGSADNLKNYWNQWN 227 Query: 322 AAYPATRFYVGL-TADDKSYQWVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYS 149 A A + ++GL A + P +V S V P+ YGG+MLW +++D YS Sbjct: 228 AIQ-AGKIFLGLPAAQGAAGSGFIPSDVLVSQVLPLINGSPKYGGVMLWSKFYD--NGYS 284 Query: 148 SLIK 137 S IK Sbjct: 285 SAIK 288
>CONB_CANEN (P49347) Concanavalin B precursor (Con B)| Length = 324 Score = 42.7 bits (99), Expect = 6e-04 Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 11/116 (9%) Frame = -3 Query: 448 PAAHVGRALATGIFERVHVRTYESDNGCNQNFG----WEGSWNEWT-AAYPATR-FYVGL 287 P ++ A+ T F+ + VR Y +D C + G +W WT + YP + ++ L Sbjct: 193 PDEYLDNAIQTRHFDYIFVRFY-NDRSCQYSTGNIQRIRNAWLSWTKSVYPRDKNLFLEL 251 Query: 286 TADDKSYQ---WVHPKNVYYSVAP-VSQKKDNYGGIMLWDRYFDKQTNYS-SLIKY 134 A + ++ P + V P + + Y GI LW+R DK+T YS ++I+Y Sbjct: 252 PASQATAPGGGYIPPSALIGQVLPYLPDLQTRYAGIALWNRQADKETGYSTNIIRY 307
>CHI2_RHIOL (P29027) Chitinase 2 precursor (EC 3.2.1.14)| Length = 542 Score = 32.7 bits (73), Expect = 0.60 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 8/106 (7%) Frame = -3 Query: 472 ATVRCGYPPAAHVGRALATGIFERVHVRTYE---SDNGCNQNFGWEGSWNEWTAAYPATR 302 A +C +P A +G L + F+ V+V+ Y S G + NF +W + T+ + Sbjct: 192 AAPQCPFPDAI-LGSVLNSASFDYVNVQFYNNYCSATGSSFNFDTWDNWAKTTSPNKNVK 250 Query: 301 FYVGL----TADDKSYQWVHPKNVYYSVAP-VSQKKDNYGGIMLWD 179 + TA Y P + ++ P ++ K +YGG+ +WD Sbjct: 251 IMFTVPGSSTAAGSGYV---PMSTLQTIVPSLASKYSSYGGVSVWD 293
>CHI1_RHIOL (P29026) Chitinase 1 precursor (EC 3.2.1.14)| Length = 540 Score = 31.6 bits (70), Expect = 1.3 Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 8/106 (7%) Frame = -3 Query: 472 ATVRCGYPPAAHVGRALATGIFERVHVRTYE---SDNGCNQNFGWEGSWNEWTAAYPATR 302 A +C +P A +G L + F+ V+V+ Y S G + NF +W + T+ + Sbjct: 192 AAPQCPFPDAI-LGSVLNSASFDYVNVQFYNNYCSATGSSFNFDTWDNWAKTTSPNKNVK 250 Query: 301 FYVGL----TADDKSYQWVHPKNVYYSVAP-VSQKKDNYGGIMLWD 179 + TA Y P + ++ P ++ + +YGG+ +WD Sbjct: 251 IMFTIPGSPTAAGSGYV---PMSTLQTIVPSLASEYSSYGGVSVWD 293
>NIRB_KLEOX (Q06458) Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)| Length = 957 Score = 30.4 bits (67), Expect = 3.0 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = -3 Query: 292 GLTADDKSYQWVH-PKNVYYSVAPVSQKKDNYGGIMLWD 179 G T +SYQW H P+ VY + + K+ GG+++ D Sbjct: 336 GRTPGCQSYQWTHGPQQVYKKIVVSADGKNLLGGVLVGD 374
>G6PI_NEUCR (Q7S986) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 561 Score = 28.9 bits (63), Expect = 8.7 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 6/73 (8%) Frame = -3 Query: 355 FGWE----GSWNEWTAAYPATRFYVGLTADDKSYQWVHPKNVYYSVAPVSQKKDNYGGIM 188 FG+E G ++ W+A + YVG K H + ++ AP+ + GGI+ Sbjct: 276 FGFESWVGGRYSVWSAIGLSVALYVGYENFHKFLAGAHAMDNHFRTAPLKENIPVLGGIL 335 Query: 187 -LW-DRYFDKQTN 155 +W +++ QT+ Sbjct: 336 SVWYSNFYNAQTH 348
>ENO_DEIRA (Q9RR60) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 422 Score = 28.9 bits (63), Expect = 8.7 Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 2/70 (2%) Frame = -3 Query: 478 LTATVRCGYPPAAHVGRALATGIFERVHVRTY--ESDNGCNQNFGWEGSWNEWTAAYPAT 305 L A + GY P + AL + E Y ES+ + W +WT+ YP Sbjct: 221 LEAIQQAGYEPGKDICIALDPAVTELYKDGQYHLESEGRVLSSDEMIDFWADWTSRYPIV 280 Query: 304 RFYVGLTADD 275 GL DD Sbjct: 281 SIEDGLAEDD 290
>CPSM_RANCA (Q91293) Carbamoyl-phosphate synthase [ammonia], mitochondrial| precursor (EC 6.3.4.16) (Carbamoyl-phosphate synthetase I) (CPSase I) Length = 1496 Score = 28.9 bits (63), Expect = 8.7 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Frame = +3 Query: 354 KFWLHPLSLSYVLTWTRSKIPVASARPTCAAGGYPHRTVAVRCS-GFPGP 500 +F LHP SL YV+ +++ +SA + A GYP +A + + G P P Sbjct: 697 QFALHPTSLEYVIIEVNARLSRSSALAS-KATGYPLAFIAAKIALGIPLP 745 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,581,876 Number of Sequences: 219361 Number of extensions: 1110786 Number of successful extensions: 3277 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 3178 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3259 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3869946934 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
