Clone Name | rbart27d02 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_473381.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1239 Score = 266 bits (134), Expect = 7e-68 Identities = 200/222 (90%) Strand = Plus / Minus Query: 311 tcatgcctcccagcccctcaagatggtggcgcgtgcaacccggttcactcccaaggtgaa 370 |||||||||||| |||||||||| |||||| |||||||||||||| ||||||| |||||| Sbjct: 1239 tcatgcctcccatcccctcaagagggtggcacgtgcaacccggttgactcccagggtgaa 1180 Query: 371 tgctcccatcctaaggctgcaatcttgagacttgcacatggccttgatgtgctggaatgc 430 || |||||||| ||| ||||||| ||||| || ||||||||||||||||||||||| | Sbjct: 1179 cgcccccatcctcaggttgcaatcatgagatttacacatggccttgatgtgctggaaaga 1120 Query: 431 gctgttcatatacttgtggagctccatgttcaccttttcttcttcccacatgaagccttg 490 ||||||| |||||||||||||||||||||||||| || || ||||||||||| ||||| Sbjct: 1119 attgttcatgtacttgtggagctccatgttcaccttctcctcatcccacatgaacccttg 1060 Query: 491 aatgttctgaacccactcaaaataactaacgatcacaccacc 532 |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1059 aatgttctgaacccactcaaaatagctaacgatcacaccacc 1018
>dbj|AB189166.1| Oryza sativa (japonica cultivar-group) OsGDH2 mRNA for glutamate dehydrogenase 2, complete cds Length = 1835 Score = 266 bits (134), Expect = 7e-68 Identities = 200/222 (90%) Strand = Plus / Minus Query: 311 tcatgcctcccagcccctcaagatggtggcgcgtgcaacccggttcactcccaaggtgaa 370 |||||||||||| |||||||||| |||||| |||||||||||||| ||||||| |||||| Sbjct: 1483 tcatgcctcccatcccctcaagagggtggcacgtgcaacccggttgactcccagggtgaa 1424 Query: 371 tgctcccatcctaaggctgcaatcttgagacttgcacatggccttgatgtgctggaatgc 430 || |||||||| ||| ||||||| ||||| || ||||||||||||||||||||||| | Sbjct: 1423 cgcccccatcctcaggttgcaatcatgagatttacacatggccttgatgtgctggaaaga 1364 Query: 431 gctgttcatatacttgtggagctccatgttcaccttttcttcttcccacatgaagccttg 490 ||||||| |||||||||||||||||||||||||| || || ||||||||||| ||||| Sbjct: 1363 attgttcatgtacttgtggagctccatgttcaccttctcctcatcccacatgaacccttg 1304 Query: 491 aatgttctgaacccactcaaaataactaacgatcacaccacc 532 |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1303 aatgttctgaacccactcaaaatagctaacgatcacaccacc 1262
>dbj|AK063467.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-H11, full insert sequence Length = 1884 Score = 266 bits (134), Expect = 7e-68 Identities = 200/222 (90%) Strand = Plus / Minus Query: 311 tcatgcctcccagcccctcaagatggtggcgcgtgcaacccggttcactcccaaggtgaa 370 |||||||||||| |||||||||| |||||| |||||||||||||| ||||||| |||||| Sbjct: 1574 tcatgcctcccatcccctcaagagggtggcacgtgcaacccggttgactcccagggtgaa 1515 Query: 371 tgctcccatcctaaggctgcaatcttgagacttgcacatggccttgatgtgctggaatgc 430 || |||||||| ||| ||||||| ||||| || ||||||||||||||||||||||| | Sbjct: 1514 cgcccccatcctcaggttgcaatcatgagatttacacatggccttgatgtgctggaaaga 1455 Query: 431 gctgttcatatacttgtggagctccatgttcaccttttcttcttcccacatgaagccttg 490 ||||||| |||||||||||||||||||||||||| || || ||||||||||| ||||| Sbjct: 1454 attgttcatgtacttgtggagctccatgttcaccttctcctcatcccacatgaacccttg 1395 Query: 491 aatgttctgaacccactcaaaataactaacgatcacaccacc 532 |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1394 aatgttctgaacccactcaaaatagctaacgatcacaccacc 1353
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 208 bits (105), Expect = 1e-50 Identities = 168/189 (88%) Strand = Plus / Minus Query: 311 tcatgcctcccagcccctcaagatggtggcgcgtgcaacccggttcactcccaaggtgaa 370 |||||||||||| |||||||||| |||||| |||||||||||||| ||||||| |||||| Sbjct: 27211222 tcatgcctcccatcccctcaagagggtggcacgtgcaacccggttgactcccagggtgaa 27211163 Query: 371 tgctcccatcctaaggctgcaatcttgagacttgcacatggccttgatgtgctggaatgc 430 || |||||||| ||| ||||||| ||||| || ||||||||||||||||||||||| | Sbjct: 27211162 cgcccccatcctcaggttgcaatcatgagatttacacatggccttgatgtgctggaaaga 27211103 Query: 431 gctgttcatatacttgtggagctccatgttcaccttttcttcttcccacatgaagccttg 490 ||||||| |||||||||||||||||||||||||| || || ||||||||||| ||||| Sbjct: 27211102 attgttcatgtacttgtggagctccatgttcaccttctcctcatcccacatgaacccttg 27211043 Query: 491 aatgttctg 499 ||||||||| Sbjct: 27211042 aatgttctg 27211034 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 497 ctgaacccactcaaaataactaacgatcacaccacc 532 |||||||||||||||||| ||||||||||||||||| Sbjct: 27210948 ctgaacccactcaaaatagctaacgatcacaccacc 27210913
>emb|AL606728.3|OSJN00102 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0038F03, complete sequence Length = 136656 Score = 208 bits (105), Expect = 1e-50 Identities = 168/189 (88%) Strand = Plus / Minus Query: 311 tcatgcctcccagcccctcaagatggtggcgcgtgcaacccggttcactcccaaggtgaa 370 |||||||||||| |||||||||| |||||| |||||||||||||| ||||||| |||||| Sbjct: 42311 tcatgcctcccatcccctcaagagggtggcacgtgcaacccggttgactcccagggtgaa 42252 Query: 371 tgctcccatcctaaggctgcaatcttgagacttgcacatggccttgatgtgctggaatgc 430 || |||||||| ||| ||||||| ||||| || ||||||||||||||||||||||| | Sbjct: 42251 cgcccccatcctcaggttgcaatcatgagatttacacatggccttgatgtgctggaaaga 42192 Query: 431 gctgttcatatacttgtggagctccatgttcaccttttcttcttcccacatgaagccttg 490 ||||||| |||||||||||||||||||||||||| || || ||||||||||| ||||| Sbjct: 42191 attgttcatgtacttgtggagctccatgttcaccttctcctcatcccacatgaacccttg 42132 Query: 491 aatgttctg 499 ||||||||| Sbjct: 42131 aatgttctg 42123 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 497 ctgaacccactcaaaataactaacgatcacaccacc 532 |||||||||||||||||| ||||||||||||||||| Sbjct: 42037 ctgaacccactcaaaatagctaacgatcacaccacc 42002
>ref|XM_467072.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1424 Score = 174 bits (88), Expect = 2e-40 Identities = 175/204 (85%) Strand = Plus / Minus Query: 311 tcatgcctcccagcccctcaagatggtggcgcgtgcaacccggttcactcccaaggtgaa 370 |||||||||||| |||||||| | || || |||||||||||| || ||||| ||||| Sbjct: 1352 tcatgcctcccatcccctcaacagagtagcctttgcaacccggttaacccccaaagtgaa 1293 Query: 371 tgctcccatcctaaggctgcaatcttgagacttgcacatggccttgatgtgctggaatgc 430 ||| |||||||||||| |||| | ||| || ||||||||| ||||||||| ||| || || Sbjct: 1292 tgcccccatcctaaggttgcagttttgggatttgcacatgtccttgatgttctgaaaagc 1233 Query: 431 gctgttcatatacttgtggagctccatgttcaccttttcttcttcccacatgaagccttg 490 | | ||||| ||||| ||||||||| |||||||||| ||||| |||||||||||||| || Sbjct: 1232 gttcttcatgtacttttggagctccctgttcaccttctcttcatcccacatgaagccctg 1173 Query: 491 aatgttctgaacccactcaaaata 514 |||||||||||||||||||||||| Sbjct: 1172 aatgttctgaacccactcaaaata 1149
>dbj|AB035927.1| Oryza sativa (japonica cultivar-group) GDH3 mRNA for glutamate dehydrogenase 3, complete cds Length = 1452 Score = 174 bits (88), Expect = 2e-40 Identities = 175/204 (85%) Strand = Plus / Minus Query: 311 tcatgcctcccagcccctcaagatggtggcgcgtgcaacccggttcactcccaaggtgaa 370 |||||||||||| |||||||| | || || |||||||||||| || ||||| ||||| Sbjct: 1378 tcatgcctcccatcccctcaacagagtagcctttgcaacccggttaacccccaaagtgaa 1319 Query: 371 tgctcccatcctaaggctgcaatcttgagacttgcacatggccttgatgtgctggaatgc 430 ||| |||||||||||| |||| | ||| || ||||||||| ||||||||| ||| || || Sbjct: 1318 tgcccccatcctaaggttgcagttttgggatttgcacatgtccttgatgttctgaaaagc 1259 Query: 431 gctgttcatatacttgtggagctccatgttcaccttttcttcttcccacatgaagccttg 490 | | ||||| ||||| ||||||||| |||||||||| ||||| |||||||||||||| || Sbjct: 1258 gttcttcatgtacttttggagctccctgttcaccttctcttcatcccacatgaagccctg 1199 Query: 491 aatgttctgaacccactcaaaata 514 |||||||||||||||||||||||| Sbjct: 1198 aatgttctgaacccactcaaaata 1175
>dbj|AK103028.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117C02, full insert sequence Length = 1424 Score = 174 bits (88), Expect = 2e-40 Identities = 175/204 (85%) Strand = Plus / Minus Query: 311 tcatgcctcccagcccctcaagatggtggcgcgtgcaacccggttcactcccaaggtgaa 370 |||||||||||| |||||||| | || || |||||||||||| || ||||| ||||| Sbjct: 1352 tcatgcctcccatcccctcaacagagtagcctttgcaacccggttaacccccaaagtgaa 1293 Query: 371 tgctcccatcctaaggctgcaatcttgagacttgcacatggccttgatgtgctggaatgc 430 ||| |||||||||||| |||| | ||| || ||||||||| ||||||||| ||| || || Sbjct: 1292 tgcccccatcctaaggttgcagttttgggatttgcacatgtccttgatgttctgaaaagc 1233 Query: 431 gctgttcatatacttgtggagctccatgttcaccttttcttcttcccacatgaagccttg 490 | | ||||| ||||| ||||||||| |||||||||| ||||| |||||||||||||| || Sbjct: 1232 gttcttcatgtacttttggagctccctgttcaccttctcttcatcccacatgaagccctg 1173 Query: 491 aatgttctgaacccactcaaaata 514 |||||||||||||||||||||||| Sbjct: 1172 aatgttctgaacccactcaaaata 1149
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 145 bits (73), Expect = 2e-31 Identities = 160/189 (84%) Strand = Plus / Minus Query: 311 tcatgcctcccagcccctcaagatggtggcgcgtgcaacccggttcactcccaaggtgaa 370 |||||||||||| |||||||| | || || |||||||||||| || ||||| ||||| Sbjct: 26261401 tcatgcctcccatcccctcaacagagtagcctttgcaacccggttaacccccaaagtgaa 26261342 Query: 371 tgctcccatcctaaggctgcaatcttgagacttgcacatggccttgatgtgctggaatgc 430 ||| |||||||||||| |||| | ||| || ||||||||| ||||||||| ||| || || Sbjct: 26261341 tgcccccatcctaaggttgcagttttgggatttgcacatgtccttgatgttctgaaaagc 26261282 Query: 431 gctgttcatatacttgtggagctccatgttcaccttttcttcttcccacatgaagccttg 490 | | ||||| ||||| ||||||||| |||||||||| ||||| |||||||||||||| || Sbjct: 26261281 gttcttcatgtacttttggagctccctgttcaccttctcttcatcccacatgaagccctg 26261222 Query: 491 aatgttctg 499 ||||||||| Sbjct: 26261221 aatgttctg 26261213
>dbj|AP007203.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0012J10 Length = 132375 Score = 145 bits (73), Expect = 2e-31 Identities = 160/189 (84%) Strand = Plus / Minus Query: 311 tcatgcctcccagcccctcaagatggtggcgcgtgcaacccggttcactcccaaggtgaa 370 |||||||||||| |||||||| | || || |||||||||||| || ||||| ||||| Sbjct: 84242 tcatgcctcccatcccctcaacagagtagcctttgcaacccggttaacccccaaagtgaa 84183 Query: 371 tgctcccatcctaaggctgcaatcttgagacttgcacatggccttgatgtgctggaatgc 430 ||| |||||||||||| |||| | ||| || ||||||||| ||||||||| ||| || || Sbjct: 84182 tgcccccatcctaaggttgcagttttgggatttgcacatgtccttgatgttctgaaaagc 84123 Query: 431 gctgttcatatacttgtggagctccatgttcaccttttcttcttcccacatgaagccttg 490 | | ||||| ||||| ||||||||| |||||||||| ||||| |||||||||||||| || Sbjct: 84122 gttcttcatgtacttttggagctccctgttcaccttctcttcatcccacatgaagccctg 84063 Query: 491 aatgttctg 499 ||||||||| Sbjct: 84062 aatgttctg 84054
>dbj|AB236412.1| Brassica napus gdh2 gene for glutamate dehydrogenase 2, complete cds Length = 3628 Score = 91.7 bits (46), Expect = 2e-15 Identities = 73/82 (89%) Strand = Plus / Minus Query: 436 tcatatacttgtggagctccatgttcaccttttcttcttcccacatgaagccttgaatgt 495 |||| ||||| || ||||||| |||||| ||||| |||||||||||||| |||||||||| Sbjct: 3428 tcatgtacttctgcagctccaggttcactttttcctcttcccacatgaacccttgaatgt 3369 Query: 496 tctgaacccactcaaaataact 517 |||| ||||||||||| ||||| Sbjct: 3368 tctggacccactcaaagtaact 3347
>dbj|AB066298.1| Brassica napus gdh2 mRNA for glutamate dehydrogenase, complete cds Length = 1494 Score = 91.7 bits (46), Expect = 2e-15 Identities = 73/82 (89%) Strand = Plus / Minus Query: 436 tcatatacttgtggagctccatgttcaccttttcttcttcccacatgaagccttgaatgt 495 |||| ||||| || ||||||| |||||| ||||| |||||||||||||| |||||||||| Sbjct: 1223 tcatgtacttctgcagctccaggttcactttttcctcttcccacatgaacccttgaatgt 1164 Query: 496 tctgaacccactcaaaataact 517 |||| ||||||||||| ||||| Sbjct: 1163 tctggacccactcaaagtaact 1142
>emb|X86924.1|VVCSGDHGE V.vinifera mRNA for NAD(H) glutamate dehydrogenase Length = 1622 Score = 85.7 bits (43), Expect = 1e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 459 ttcaccttttcttcttcccacatgaagccttgaatgttctgaacccactcaaaataacta 518 |||||||| |||||||||||||| || |||||||| |||||||||||||||||||| || Sbjct: 1274 ttcaccttctcttcttcccacataaaaccttgaatattctgaacccactcaaaatagctc 1215 Query: 519 acgatcacacc 529 ||| ||||||| Sbjct: 1214 acggtcacacc 1204
>gb|AY350714.1| Olimarabidopsis pumila clone BAC Op37I22, complete sequence Length = 84869 Score = 83.8 bits (42), Expect = 5e-13 Identities = 72/82 (87%) Strand = Plus / Minus Query: 436 tcatatacttgtggagctccatgttcaccttttcttcttcccacatgaagccttgaatgt 495 |||| ||||| || ||||||| |||||| ||||| |||||||||||||| ||||| |||| Sbjct: 42929 tcatgtacttttgcagctccaagttcactttttcctcttcccacatgaacccttgtatgt 42870 Query: 496 tctgaacccactcaaaataact 517 |||| ||||||||||| ||||| Sbjct: 42869 tctgtacccactcaaagtaact 42848
>ref|NM_120826.2| Arabidopsis thaliana GDH2 (GLUTAMATE DEHYDROGENASE 2); oxidoreductase AT5G07440 (GDH2) mRNA, complete cds Length = 1634 Score = 79.8 bits (40), Expect = 8e-12 Identities = 61/68 (89%) Strand = Plus / Minus Query: 450 agctccatgttcaccttttcttcttcccacatgaagccttgaatgttctgaacccactca 509 ||||||| |||||| ||||| |||||||||||||| |||||||||||||| |||||||| Sbjct: 1313 agctccaagttcactttttcctcttcccacatgaatccttgaatgttctgcacccactcg 1254 Query: 510 aaataact 517 || ||||| Sbjct: 1253 aagtaact 1246
>gb|AY681352.1| Lupinus luteus glutamate dehydrogenase 1 (GDH1) mRNA, complete cds Length = 1405 Score = 79.8 bits (40), Expect = 8e-12 Identities = 58/64 (90%) Strand = Plus / Minus Query: 457 tgttcaccttttcttcttcccacatgaagccttgaatgttctgaacccactcaaaataac 516 |||||||||| ||||| ||||||||||| ||||| |||||||| ||||||||||| |||| Sbjct: 1133 tgttcaccttctcttcatcccacatgaacccttgtatgttctgcacccactcaaagtaac 1074 Query: 517 taac 520 |||| Sbjct: 1073 taac 1070
>gb|DQ497631.1| Vitis vinifera GDHB glutamate dehydrogenase (gdhB) mRNA, complete cds Length = 1460 Score = 79.8 bits (40), Expect = 8e-12 Identities = 43/44 (97%) Strand = Plus / Minus Query: 474 tcccacatgaagccttgaatgttctgaacccactcaaaataact 517 ||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1073 tcccacatgaaaccttgaatgttctgaacccactcaaaataact 1030
>emb|AJ011096.2|AOF011096 Asparagus officinalis mRNA for glutamate dehydrogenase Length = 1681 Score = 79.8 bits (40), Expect = 8e-12 Identities = 52/56 (92%) Strand = Plus / Minus Query: 462 accttttcttcttcccacatgaagccttgaatgttctgaacccactcaaaataact 517 ||||| ||||| ||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 1257 accttctcttcatcccacatgaatccttggatgttctgaacccactcaaaataact 1202
>gb|AF386976.1|AF386976 Arabidopsis thaliana glutamate dehydrogenase 2 (T2I1_150) mRNA, complete cds Length = 1686 Score = 79.8 bits (40), Expect = 8e-12 Identities = 61/68 (89%) Strand = Plus / Minus Query: 450 agctccatgttcaccttttcttcttcccacatgaagccttgaatgttctgaacccactca 509 ||||||| |||||| ||||| |||||||||||||| |||||||||||||| |||||||| Sbjct: 1379 agctccaagttcactttttcctcttcccacatgaatccttgaatgttctgcacccactcg 1320 Query: 510 aaataact 517 || ||||| Sbjct: 1319 aagtaact 1312
>emb|AL163912.1|ATT2I1 Arabidopsis thaliana DNA chromosome 5, BAC clone T2I1 (ESSA project) Length = 116763 Score = 79.8 bits (40), Expect = 8e-12 Identities = 61/68 (89%) Strand = Plus / Minus Query: 450 agctccatgttcaccttttcttcttcccacatgaagccttgaatgttctgaacccactca 509 ||||||| |||||| ||||| |||||||||||||| |||||||||||||| |||||||| Sbjct: 73042 agctccaagttcactttttcctcttcccacatgaatccttgaatgttctgcacccactcg 72983 Query: 510 aaataact 517 || ||||| Sbjct: 72982 aagtaact 72975
>gb|U56635.1|ATU56635 Arabidopsis thaliana glutamate dehydrogenase 2 (GDH2) mRNA, complete cds Length = 1620 Score = 79.8 bits (40), Expect = 8e-12 Identities = 61/68 (89%) Strand = Plus / Minus Query: 450 agctccatgttcaccttttcttcttcccacatgaagccttgaatgttctgaacccactca 509 ||||||| |||||| ||||| |||||||||||||| |||||||||||||| |||||||| Sbjct: 1315 agctccaagttcactttttcctcttcccacatgaatccttgaatgttctgcacccactcg 1256 Query: 510 aaataact 517 || ||||| Sbjct: 1255 aagtaact 1248
>emb|AJ420266.1|NTA420266 Nicotiana tabacum mRNA for glutamate dehydrogenase (gdh1 gene) Length = 1630 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 474 tcccacatgaagccttgaatgttctgaacccactcaaaataactaacgatcacaccacc 532 |||||||| ||||| || |||||||||||||||||||||||||||||| | |||||||| Sbjct: 1184 tcccacataaagccctggatgttctgaacccactcaaaataactaacggtgacaccacc 1126
>gb|DQ160071.1| Taraxacum officinale TO56-1 (To56-1) mRNA, partial cds Length = 175 Score = 73.8 bits (37), Expect = 5e-10 Identities = 55/61 (90%) Strand = Plus / Minus Query: 457 tgttcaccttttcttcttcccacatgaagccttgaatgttctgaacccactcaaaataac 516 ||||||| ||||| || |||||||| || |||||||| |||||||||||||||||||||| Sbjct: 167 tgttcactttttcctcgtcccacataaacccttgaatattctgaacccactcaaaataac 108 Query: 517 t 517 | Sbjct: 107 t 107
>ref|NM_111262.1| Arabidopsis thaliana oxidoreductase AT3G03910 mRNA, complete cds Length = 1479 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 450 agctccatgttcaccttttcttcttcccacatgaagccttgaatgttctgaacccactca 509 |||||| | ||||||||||| || ||||||||||| ||||| ||||||||||||||||| Sbjct: 1168 agctccctattcaccttttcctcatcccacatgaatccttgtatgttctgaacccactcg 1109 Query: 510 aaataact 517 || ||||| Sbjct: 1108 aagtaact 1101
>ref|NM_121822.2| Arabidopsis thaliana GDH1 (GLUTAMATE DEHYDROGENASE 1); oxidoreductase AT5G18170 (GDH1) mRNA, complete cds Length = 1565 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 458 gttcaccttttcttcttcccacatgaagccttgaatgttctgaaccca 505 ||||||||| ||||| |||||||| ||||||||||||||||||||||| Sbjct: 1217 gttcaccttctcttcctcccacataaagccttgaatgttctgaaccca 1170
>gb|BT025561.1| Arabidopsis thaliana At5g18170 mRNA, complete cds Length = 1236 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 458 gttcaccttttcttcttcccacatgaagccttgaatgttctgaaccca 505 ||||||||| ||||| |||||||| ||||||||||||||||||||||| Sbjct: 1089 gttcaccttctcttcctcccacataaagccttgaatgttctgaaccca 1042
>gb|AY049243.1| Arabidopsis thaliana AT5g18170/MRG7_13 mRNA, complete cds Length = 1560 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 458 gttcaccttttcttcttcccacatgaagccttgaatgttctgaaccca 505 ||||||||| ||||| |||||||| ||||||||||||||||||||||| Sbjct: 1217 gttcaccttctcttcctcccacataaagccttgaatgttctgaaccca 1170
>gb|U53527.1|ATU53527 Arabidopsis thaliana glutamate dehydrogenase 1 (GDH1) mRNA, complete cds Length = 1514 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 458 gttcaccttttcttcttcccacatgaagccttgaatgttctgaaccca 505 ||||||||| ||||| |||||||| ||||||||||||||||||||||| Sbjct: 1188 gttcaccttctcttcctcccacataaagccttgaatgttctgaaccca 1141
>gb|U37771.1|ATU37771 Arabidopsis thaliana glutamate dehydrogenase 1 (GDH1) mRNA, complete cds Length = 1539 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 458 gttcaccttttcttcttcccacatgaagccttgaatgttctgaaccca 505 ||||||||| ||||| |||||||| ||||||||||||||||||||||| Sbjct: 1190 gttcaccttctcttcctcccacataaagccttgaatgttctgaaccca 1143
>gb|U48695.1|SLU48695 Solanum lycopersicum glutamate dehydrogenase (legdh1) mRNA, complete cds Length = 1568 Score = 69.9 bits (35), Expect = 8e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 474 tcccacatgaagccttgaatgttctgaacccactcaaaataactaacgatcacaccacc 532 |||||||| |||||||| |||||||| ||||||||||||||||| ||| | |||||||| Sbjct: 1145 tcccacataaagccttggatgttctggacccactcaaaataactgacggtgacaccacc 1087
>emb|Y08292.1|NPY08292 N.plumbaginifolia mRNA for NADH glutamate dehydrogenase Length = 1535 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 457 tgttcaccttttcttcttcccacatgaagccttgaatgttctgaacccactcaaaataac 516 |||| ||||| || || |||||||| || |||||||| |||||||||||||||||||||| Sbjct: 1095 tgttaaccttctcctcatcccacataaaaccttgaatattctgaacccactcaaaataac 1036 Query: 517 t 517 | Sbjct: 1035 t 1035
>ref|XM_469970.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1615 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 457 tgttcaccttttcttcttcccacatgaagccttgaatgttctgaacccactc 508 |||||||||| || || ||||||||||| || |||||||||||||||||||| Sbjct: 1160 tgttcaccttctcctcgtcccacatgaaaccctgaatgttctgaacccactc 1109
>ref|XM_507557.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0060J21.2 mRNA Length = 1684 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 457 tgttcaccttttcttcttcccacatgaagccttgaatgttctgaacccactc 508 |||||||||| || || ||||||||||| || |||||||||||||||||||| Sbjct: 1229 tgttcaccttctcctcgtcccacatgaaaccctgaatgttctgaacccactc 1178
>ref|XM_507076.2| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0060J21.2 mRNA Length = 1617 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 457 tgttcaccttttcttcttcccacatgaagccttgaatgttctgaacccactc 508 |||||||||| || || ||||||||||| || |||||||||||||||||||| Sbjct: 1162 tgttcaccttctcctcgtcccacatgaaaccctgaatgttctgaacccactc 1111
>gb|AY366369.1| Nicotiana tabacum glutamate dehydrogenase alpha subunit (gdh1) mRNA, partial cds Length = 887 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 474 tcccacatgaagccttgaatgttctgaacccactcaaaataact 517 |||||||| || |||||||| ||||||||||||||||||||||| Sbjct: 880 tcccacataaaaccttgaatattctgaacccactcaaaataact 837
>gb|AY332470.1| Oryza sativa (japonica cultivar-group) glutamate dehydrogenase (GDH) mRNA, complete cds Length = 1416 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 457 tgttcaccttttcttcttcccacatgaagccttgaatgttctgaacccactc 508 |||||||||| || || ||||||||||| || |||||||||||||||||||| Sbjct: 1160 tgttcaccttctcctcgtcccacatgaaaccctgaatgttctgaacccactc 1109
>emb|AJ879895.1| Glycine max mRNA for glutamate dehydrogenase 1 (gdh1 gene) Length = 1635 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 457 tgttcaccttttcttcttcccacatgaagccttgaatgttctgaacccactcaaaataac 516 ||||||| || || || ||||||||||| ||||| |||||||||||||||||||| || | Sbjct: 1252 tgttcactttctcctcatcccacatgaaaccttggatgttctgaacccactcaaagtagc 1193 Query: 517 taac 520 |||| Sbjct: 1192 taac 1189
>dbj|AB024962.1| Oryza sativa (japonica cultivar-group) GDH1 mRNA for glutamate dehydrogenase 1, complete cds Length = 1550 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 457 tgttcaccttttcttcttcccacatgaagccttgaatgttctgaacccactc 508 |||||||||| || || ||||||||||| || |||||||||||||||||||| Sbjct: 1103 tgttcaccttctcctcgtcccacatgaaaccctgaatgttctgaacccactc 1052
>gb|AC025815.10|AC025815 Arabidopsis thaliana chromosome 1 BAC T8D8 genomic sequence, complete sequence Length = 55021 Score = 63.9 bits (32), Expect = 5e-07 Identities = 60/68 (88%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 450 agctccatgttcaccttttcttcttcccacatgaagccttgaatgttctgaacccactca 509 ||||||| |||||| ||||| |||||||||||||| | ||||||||||| ||||||||| Sbjct: 15033 agctccaagttcactttttcctcttcccacatgaa-ctttgaatgttctacacccactca 15091 Query: 510 aaataact 517 || ||||| Sbjct: 15092 aagtaact 15099
>dbj|AK071839.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121E06, full insert sequence Length = 1682 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 457 tgttcaccttttcttcttcccacatgaagccttgaatgttctgaacccactc 508 |||||||||| || || ||||||||||| || |||||||||||||||||||| Sbjct: 1230 tgttcaccttctcctcgtcccacatgaaaccctgaatgttctgaacccactc 1179
>gb|AY072535.1| Arabidopsis thaliana glutamate dehydrogenase 2 (T2I1_150) mRNA, complete cds Length = 1173 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 471 tcttcccacatgaagccttgaatgttctgaacccactcaaaataact 517 |||||||||||||| |||||||||||||| |||||||| || ||||| Sbjct: 1169 tcttcccacatgaatccttgaatgttctgcacccactcgaagtaact 1123
>emb|AJ879896.1| Glycine max mRNA for glutamate dehydrogenase 2 (gdh2 gene) Length = 1500 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 458 gttcaccttttcttcttcccacatgaagccttgaatgttctgaacccactcaaa 511 |||||| || ||||| ||||||||||| |||||||| ||||||||||| ||||| Sbjct: 1183 gttcactttctcttcatcccacatgaaaccttgaatattctgaacccattcaaa 1130
>dbj|AB012246.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRG7 Length = 83948 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 458 gttcaccttttcttcttcccacatgaagccttgaatgttctg 499 ||||||||| ||||| |||||||| ||||||||||||||||| Sbjct: 31607 gttcaccttctcttcctcccacataaagccttgaatgttctg 31566
>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete sequence Length = 162497 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 457 tgttcaccttttcttcttcccacatgaagccttgaatgttctgaac 502 |||||||||| || || ||||||||||| || |||||||||||||| Sbjct: 9321 tgttcaccttctcctcgtcccacatgaaaccctgaatgttctgaac 9276
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 457 tgttcaccttttcttcttcccacatgaagccttgaatgttctgaac 502 |||||||||| || || ||||||||||| || |||||||||||||| Sbjct: 32734586 tgttcaccttctcctcgtcccacatgaaaccctgaatgttctgaac 32734631
>emb|AJ011006.1|AOF011006 Asparagus officinalis mRNA for NADH glutamate dehydrogenase, partial Length = 607 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 495 ttctgaacccactcaaaataactaacgatcacaccacc 532 ||||||||||| ||||| |||||||| ||||||||||| Sbjct: 594 ttctgaacccattcaaagtaactaacaatcacaccacc 557
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 457 tgttcaccttttcttcttcccacatgaagccttgaatgttctgaac 502 |||||||||| || || ||||||||||| || |||||||||||||| Sbjct: 32825096 tgttcaccttctcctcgtcccacatgaaaccctgaatgttctgaac 32825141
>gb|AY366370.1| Nicotiana tabacum glutamate dehydrogenase beta subunit (gdh2) mRNA, partial cds Length = 887 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 474 tcccacatgaagccttgaatgttctgaacccactcaaaata 514 |||||||| || ||||| |||||||||||||| |||||||| Sbjct: 880 tcccacataaaaccttggatgttctgaacccattcaaaata 840
>gb|BT012758.1| Lycopersicon esculentum clone 113702R, mRNA sequence Length = 1604 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 474 tcccacatgaagccttgaatgttctgaacccactcaaaata 514 |||||||| || |||||||| ||||||||||| |||||||| Sbjct: 1100 tcccacataaatccttgaatattctgaacccattcaaaata 1060
>gb|AC009540.6|ATAC009540 Arabidopsis thaliana chromosome III BAC F20H23 genomic sequence, complete sequence Length = 101410 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Plus Query: 450 agctccatgttcaccttttcttcttcccacatgaagccttgaatgttct 498 |||||| | ||||||||||| || ||||||||||| ||||| ||||||| Sbjct: 8324 agctccctattcaccttttcctcatcccacatgaatccttgtatgttct 8372
>gb|AC011698.6|ATAC011698 Arabidopsis thaliana chromosome III BAC T11I18 genomic sequence, complete sequence Length = 63654 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Minus Query: 450 agctccatgttcaccttttcttcttcccacatgaagccttgaatgttct 498 |||||| | ||||||||||| || ||||||||||| ||||| ||||||| Sbjct: 5348 agctccctattcaccttttcctcatcccacatgaatccttgtatgttct 5300
>emb|Y08293.2|NPY08293 N.plumbaginifolia mRNA for NADH glutamate dehydrogenase Length = 1574 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 474 tcccacatgaagccttgaatgttctgaacccactcaaaata 514 |||||||| || ||||| |||||||||||||| |||||||| Sbjct: 1141 tcccacataaaaccttggatgttctgaacccattcaaaata 1101
>emb|AJ303070.1|VVI303070 Vitis vinifera gdhA gene for NADH glutamate dehydrogenase, exons 1-9 Length = 3146 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 459 ttcaccttttcttcttcccacatgaagccttgaatgttctg 499 |||||||| |||||||||||||| || |||||||| ||||| Sbjct: 2998 ttcaccttctcttcttcccacataaaaccttgaatattctg 2958 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 497 ctgaacccactcaaaataactaacgatcacacc 529 |||||||||||||||||| || ||| ||||||| Sbjct: 2838 ctgaacccactcaaaatagctcacggtcacacc 2806
>gb|DQ497632.1| Vitis vinifera GDHB glutamate dehydrogenase (gdhB) gene, complete cds Length = 4013 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 474 tcccacatgaagccttgaatgttctg 499 ||||||||||| |||||||||||||| Sbjct: 3850 tcccacatgaaaccttgaatgttctg 3825 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 497 ctgaacccactcaaaataact 517 ||||||||||||||||||||| Sbjct: 3571 ctgaacccactcaaaataact 3551
>emb|Z72909.1|SCYGR124W S.cerevisiae chromosome VII reading frame ORF YGR124w Length = 4121 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 302 tggaactcatcatgcctccca 322 ||||||||||||||||||||| Sbjct: 1212 tggaactcatcatgcctccca 1232
>emb|Z72908.1|SCYGR123C S.cerevisiae chromosome VII reading frame ORF YGR123c Length = 4800 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 302 tggaactcatcatgcctccca 322 ||||||||||||||||||||| Sbjct: 4272 tggaactcatcatgcctccca 4292
>emb|X83099.1|SCDNAORFS S.cerevisiae DNA for ORFs from chromosome VII Length = 18258 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 302 tggaactcatcatgcctccca 322 ||||||||||||||||||||| Sbjct: 10805 tggaactcatcatgcctccca 10825
>emb|AJ277949.1|NPL277949 Nicotiana plumbaginifolia partial gdhA gene for NADH glutamate dehydrogenase, exons 1-9 Length = 3167 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 497 ctgaacccactcaaaataact 517 ||||||||||||||||||||| Sbjct: 2897 ctgaacccactcaaaataact 2877
>emb|AJ248284.1|CNSPAX02 Pyrococcus abyssi complete genome; segment 2/6 Length = 293250 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Minus Query: 492 atgttctgaacccactcaaaataactaacgatcacaccacc 532 ||||||||||||||||| || ||||| || |||||||||| Sbjct: 236043 atgttctgaacccactcgaagtaactgactgtcacaccacc 236003
>gb|AC100805.2| Homo sapiens chromosome 8, clone CTC-789J18, complete sequence Length = 155955 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 458 gttcaccttttcttcttccca 478 ||||||||||||||||||||| Sbjct: 1326 gttcaccttttcttcttccca 1346
>gb|AC013701.6| Homo sapiens, clone RP11-22C8, complete sequence Length = 160275 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 458 gttcaccttttcttcttccca 478 ||||||||||||||||||||| Sbjct: 39491 gttcaccttttcttcttccca 39471
>emb|BX000474.13| Mouse DNA sequence from clone RP24-80C21 on chromosome 2, complete sequence Length = 205184 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 137 ctaacataaagaccaaaccca 157 ||||||||||||||||||||| Sbjct: 61560 ctaacataaagaccaaaccca 61540
>dbj|AP004912.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT11L19, TM0070, complete sequence Length = 128164 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 457 tgttcaccttttcttcttcccacat 481 ||||||||| ||||||||||||||| Sbjct: 27346 tgttcacctcttcttcttcccacat 27322
>gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome Length = 2427734 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 494 gttctgaacccactcaaaataact 517 |||||||||||| ||||||||||| Sbjct: 2012178 gttctgaacccattcaaaataact 2012155
>ref|XM_642264.1| Dictyostelium discoideum hypothetical protein (DDB0189592), partial mRNA Length = 3192 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 taaacattcaacaactctga 77 |||||||||||||||||||| Sbjct: 396 taaacattcaacaactctga 377
>gb|AC124535.4| Mus musculus BAC clone RP23-331C24 from chromosome 18, complete sequence Length = 206191 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 aaacccatcatctgtcatgt 170 |||||||||||||||||||| Sbjct: 13695 aaacccatcatctgtcatgt 13676
>gb|AC165311.3| Mus musculus chromosome 18, clone RP23-352F3, complete sequence Length = 174474 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 aaacccatcatctgtcatgt 170 |||||||||||||||||||| Sbjct: 42172 aaacccatcatctgtcatgt 42153
>emb|AL732323.5| Human DNA sequence from clone RP11-6F6 on chromosome 9, complete sequence Length = 46786 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 tgttctgaacccactcaaaa 512 |||||||||||||||||||| Sbjct: 21834 tgttctgaacccactcaaaa 21853
>emb|AL662819.5| Human DNA sequence from clone RP13-211P9 on chromosome X Contains a novel pseudogene, complete sequence Length = 30493 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ttgaaaccaatgaggccaaa 21 |||||||||||||||||||| Sbjct: 19951 ttgaaaccaatgaggccaaa 19970
>gb|AF403178.3| Lycopersicon esculentum NADH-glutamate dehydrogenase (gdh) gene, complete cds Length = 3568 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 501 acccactcaaaataactaacgatcacaccacc 532 ||||||||||||||||| ||| | |||||||| Sbjct: 3040 acccactcaaaataactgacggtgacaccacc 3009
>emb|BX571700.8| Zebrafish DNA sequence from clone CH211-168K14 in linkage group 9, complete sequence Length = 137898 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 187 caactggactcctcccatgccggcaact 214 ||||| ||||||||||||||| |||||| Sbjct: 99523 caacttgactcctcccatgccagcaact 99496
>gb|AC131961.1| Drosophila pseudoobscura FOSMID DPSF1-548A3 (Children's Hospital Oakland Research Institute Drosophila pseudoobscura FOSMID Library) complete sequence Length = 39990 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 tacttgtggagctccatgtt 460 |||||||||||||||||||| Sbjct: 9202 tacttgtggagctccatgtt 9221
>gb|AC157607.4| Mus musculus chromosome 1, clone RP23-401G11, complete sequence Length = 200421 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 456 atgttcaccttttcttcttc 475 |||||||||||||||||||| Sbjct: 87127 atgttcaccttttcttcttc 87108
>gb|AC104821.4| Homo sapiens BAC clone RP11-745L13 from 4, complete sequence Length = 93879 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 aacttatgatgaatttacca 230 |||||||||||||||||||| Sbjct: 51650 aacttatgatgaatttacca 51669
>dbj|AK052152.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330001E03 product:unclassifiable, full insert sequence Length = 4323 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 gcacatggccttgatgtgct 423 |||||||||||||||||||| Sbjct: 4046 gcacatggccttgatgtgct 4027
>gb|AC012361.10| Homo sapiens BAC clone RP11-348P18 from 2, complete sequence Length = 207184 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 184 tttcaactggactcctcccatgcc 207 ||||||||||| |||||||||||| Sbjct: 168543 tttcaactggagtcctcccatgcc 168520
>emb|AL929229.6| Zebrafish DNA sequence from clone CH211-1E14 in linkage group 18, complete sequence Length = 184794 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 taaacattcaacaactctga 77 |||||||||||||||||||| Sbjct: 67303 taaacattcaacaactctga 67284
>emb|CT025645.16| Mouse DNA sequence from clone RP23-233D21 on chromosome 13, complete sequence Length = 225179 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 gcacatggccttgatgtgct 423 |||||||||||||||||||| Sbjct: 137800 gcacatggccttgatgtgct 137781
>emb|AL671848.7| Mouse DNA sequence from clone RP23-110K5 on chromosome X, complete sequence Length = 190964 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 455 catgttcaccttttcttcttccca 478 ||||||| |||||||||||||||| Sbjct: 62225 catgttccccttttcttcttccca 62202 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,340,244 Number of Sequences: 3902068 Number of extensions: 5340244 Number of successful extensions: 110403 Number of sequences better than 10.0: 79 Number of HSP's better than 10.0 without gapping: 79 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 110161 Number of HSP's gapped (non-prelim): 241 length of query: 532 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 509 effective length of database: 17,143,297,704 effective search space: 8725938531336 effective search space used: 8725938531336 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)