>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  153 bits (77), Expect = 7e-34
 Identities = 140/161 (86%)
 Strand = Plus / Minus

                                                                            
Query: 295      actcaattgccaatgaaatctctcatgttcttcaaccaaaccacatactccttctcatcc 354
                |||||||| |||| ||| ||| ||||| ||||||||||||||| ||||||||||||||||
Sbjct: 12646491 actcaattcccaacgaattctttcatgctcttcaaccaaaccagatactccttctcatcc 12646432

                                                                            
Query: 355      ttgcccatcatgtactcaagcagccagtcatggagcgagtgcttgatccccctcacctca 414
                |||| ||||||||||||   |||||||||||| || ||||||||||| |||||||| || 
Sbjct: 12646431 ttgctcatcatgtactcgcacagccagtcatgcagtgagtgcttgattcccctcacttcg 12646372

                                                         
Query: 415      agatacctgtggaacgacttctgcaagctctcgtccagatc 455
                ||||||| ||| || | ||||||||||||||| || |||||
Sbjct: 12646371 agataccggtgcaaggccttctgcaagctctcatcaagatc 12646331



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                            
Query: 507      cagcaacctcatagtttcaattgccagttcatcatcattaaagt 550
                ||||| ||||||| ||||||||||||||||||||||||| ||||
Sbjct: 12646004 cagcatcctcatactttcaattgccagttcatcatcattgaagt 12645961

>dbj|AP004757.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0652D10
          Length = 156744

 Score =  153 bits (77), Expect = 7e-34
 Identities = 140/161 (86%)
 Strand = Plus / Minus

                                                                          
Query: 295    actcaattgccaatgaaatctctcatgttcttcaaccaaaccacatactccttctcatcc 354
              |||||||| |||| ||| ||| ||||| ||||||||||||||| ||||||||||||||||
Sbjct: 128804 actcaattcccaacgaattctttcatgctcttcaaccaaaccagatactccttctcatcc 128745

                                                                          
Query: 355    ttgcccatcatgtactcaagcagccagtcatggagcgagtgcttgatccccctcacctca 414
              |||| ||||||||||||   |||||||||||| || ||||||||||| |||||||| || 
Sbjct: 128744 ttgctcatcatgtactcgcacagccagtcatgcagtgagtgcttgattcccctcacttcg 128685

                                                       
Query: 415    agatacctgtggaacgacttctgcaagctctcgtccagatc 455
              ||||||| ||| || | ||||||||||||||| || |||||
Sbjct: 128684 agataccggtgcaaggccttctgcaagctctcatcaagatc 128644



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                          
Query: 507    cagcaacctcatagtttcaattgccagttcatcatcattaaagt 550
              ||||| ||||||| ||||||||||||||||||||||||| ||||
Sbjct: 128317 cagcatcctcatactttcaattgccagttcatcatcattgaagt 128274

>dbj|AK068142.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134C08, full
           insert sequence
          Length = 1180

 Score =  153 bits (77), Expect = 7e-34
 Identities = 140/161 (86%)
 Strand = Plus / Minus

                                                                       
Query: 295 actcaattgccaatgaaatctctcatgttcttcaaccaaaccacatactccttctcatcc 354
           |||||||| |||| ||| ||| ||||| ||||||||||||||| ||||||||||||||||
Sbjct: 853 actcaattcccaacgaattctttcatgctcttcaaccaaaccagatactccttctcatcc 794

                                                                       
Query: 355 ttgcccatcatgtactcaagcagccagtcatggagcgagtgcttgatccccctcacctca 414
           |||| ||||||||||||   |||||||||||| || ||||||||||| |||||||| || 
Sbjct: 793 ttgctcatcatgtactcgcacagccagtcatgcagtgagtgcttgattcccctcacttcg 734

                                                    
Query: 415 agatacctgtggaacgacttctgcaagctctcgtccagatc 455
           ||||||| ||| || | ||||||||||||||| || |||||
Sbjct: 733 agataccggtgcaaggccttctgcaagctctcatcaagatc 693



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                       
Query: 507 cagcaacctcatagtttcaattgccagttcatcatcattaaagt 550
           ||||| ||||||| ||||||||||||||||||||||||| ||||
Sbjct: 641 cagcatcctcatactttcaattgccagttcatcatcattgaagt 598

>gb|BT017661.1| Zea mays clone EL01N0440F12.c mRNA sequence
          Length = 641

 Score =  131 bits (66), Expect = 3e-27
 Identities = 192/234 (82%)
 Strand = Plus / Minus

                                                                       
Query: 317 tcatgttcttcaaccaaaccacatactccttctcatccttgcccatcatgtactcaagca 376
           ||||| |||||| |||||| |||||||||||||||||||| | ||||||||||||   ||
Sbjct: 551 tcatgctcttcagccaaacaacatactccttctcatcctttctcatcatgtactcgtaca 492

                                                                       
Query: 377 gccagtcatggagcgagtgcttgatccccctcacctcaagatacctgtggaacgacttct 436
           |||| ||||| || || || |||| |||||| |||||||| |||||||| || | |||||
Sbjct: 491 gccaatcatgtagtgaatgtttgaaccccctgacctcaaggtacctgtgcaaggccttct 432

                                                                       
Query: 437 gcaagctctcgtccagatcagagaattgtggcccctcatatgcattatcagtaaggttgg 496
           |||||||||  ||||| || || |||||||||||||||||  |||| | || |  |  | 
Sbjct: 431 gcaagctcttatccaggtccgaaaattgtggcccctcatacacattcttagcatcggggt 372

                                                                 
Query: 497 catcgcgattcagcaacctcatagtttcaattgccagttcatcatcattaaagt 550
            ||| || ||||||  ||||||| |||||||||  |||||||||||||||||||
Sbjct: 371 tatcacggttcagcgccctcatattttcaattgttagttcatcatcattaaagt 318

>gb|AY111078.1| Zea mays CL19095_1 mRNA sequence
          Length = 805

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 80/97 (82%)
 Strand = Plus / Plus

                                                                       
Query: 375 cagccagtcatggagcgagtgcttgatccccctcacctcaagatacctgtggaacgactt 434
           |||||| ||||| || || || |||| | |||| |||||||| |||||||| || | |||
Sbjct: 228 cagccaatcatgtagtgaatgtttgaacaccctgacctcaaggtacctgtgcaaggcctt 287

                                                
Query: 435 ctgcaagctctcgtccagatcagagaattgtggcccc 471
           |||||||||||  ||||| || || ||||||||||||
Sbjct: 288 ctgcaagctcttatccaggtccgaaaattgtggcccc 324



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 513 cctcatagtttcaattgccagttcatcatcattaaagt 550
           ||||||| |||||||||  |||||||||||||||||||
Sbjct: 366 cctcatattttcaattgttagttcatcatcattaaagt 403

>gb|AC132945.3| Mus musculus BAC clone RP24-321A15 from 8, complete sequence
          Length = 230047

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 403   cccctcacctcaagatacctg 423
             |||||||||||||||||||||
Sbjct: 90762 cccctcacctcaagatacctg 90782

>gb|AC140276.3| Mus musculus BAC clone RP23-336J13 from 8, complete sequence
          Length = 211518

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 403   cccctcacctcaagatacctg 423
             |||||||||||||||||||||
Sbjct: 16693 cccctcacctcaagatacctg 16673

>gb|AC167018.4| Mus musculus BAC clone RP23-354F11 from chromosome 16, complete sequence
          Length = 199488

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 306    aatgaaatctctcatgttct 325
              ||||||||||||||||||||
Sbjct: 118442 aatgaaatctctcatgttct 118423

>emb|CT010434.8| Mouse DNA sequence from clone RP23-225H9 on chromosome 17, complete
             sequence
          Length = 218000

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 268   aacagaatgaagggcagtgg 287
             ||||||||||||||||||||
Sbjct: 11919 aacagaatgaagggcagtgg 11900

>gb|AC115294.5| Mus musculus BAC clone RP23-97A19 from chromosome 3, complete sequence
          Length = 149451

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 306   aatgaaatctctcatgttct 325
             ||||||||||||||||||||
Sbjct: 51102 aatgaaatctctcatgttct 51083

>gb|AC157684.2| Xenopus tropicalis clone ISB1-162F14, complete sequence
          Length = 111177

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 526   attgccagttcatcatcattaaag 549
             |||||||||||||||| |||||||
Sbjct: 49888 attgccagttcatcatgattaaag 49865

>emb|CR361543.9| Zebrafish DNA sequence from clone CH211-25E11 in linkage group 8,
             complete sequence
          Length = 66809

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   cagaaagcaatgcacaatta 219
             ||||||||||||||||||||
Sbjct: 35210 cagaaagcaatgcacaatta 35229

>emb|AL033519.42|HS340B19 Human DNA sequence from clone RP3-340B19 on chromosome 6p21.2-21.3
             Contains the TULP1 gene for tubby like protein 1, a novel
             gene, ribosomal protein S15A (RPS15A) and L36 (RPL36)
             pseudogenes, the 3' end of the FKBP5 gene for FK506
             binding protein 5 (FKBP51) and two CpG islands, complete
             sequence
          Length = 178985

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 263   attaaaacagaatgaagggc 282
             ||||||||||||||||||||
Sbjct: 90229 attaaaacagaatgaagggc 90248

>gb|AC024248.7| Homo sapiens BAC clone RP11-659O3 from 4, complete sequence
          Length = 202340

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 155   agcaaaacataaatccacct 174
             ||||||||||||||||||||
Sbjct: 90693 agcaaaacataaatccacct 90674

>gb|AC091901.3| Homo sapiens chromosome 5 clone RP11-167P20, complete sequence
          Length = 176633

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 270   cagaatgaagggcagtggca 289
             ||||||||||||||||||||
Sbjct: 81328 cagaatgaagggcagtggca 81309

>emb|BX323602.7| Zebrafish DNA sequence from clone RP71-61H23, complete sequence
          Length = 156514

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   cagaaagcaatgcacaatta 219
             ||||||||||||||||||||
Sbjct: 39146 cagaaagcaatgcacaatta 39165

>gb|AC068035.4| Homo sapiens BAC clone RP11-799L6 from 2, complete sequence
          Length = 136932

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 455   cagagaattgtggcccctca 474
             ||||||||||||||||||||
Sbjct: 90584 cagagaattgtggcccctca 90603

>emb|X04262.1|RNALDOG3 R.norvegicus gene encoding aldolase A, exons 4 & 5
          Length = 363

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 216 attatgatcagacaggtttg 235
           ||||||||||||||||||||
Sbjct: 158 attatgatcagacaggtttg 139

>dbj|AB209893.1| Homo sapiens mRNA for FK506 binding protein 5 variant protein
          Length = 7307

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 263  attaaaacagaatgaagggc 282
            ||||||||||||||||||||
Sbjct: 1663 attaaaacagaatgaagggc 1644


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,717,256
Number of Sequences: 3902068
Number of extensions: 4717256
Number of successful extensions: 98671
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98607
Number of HSP's gapped (non-prelim): 64
length of query: 550
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 527
effective length of database: 17,143,297,704
effective search space: 9034517890008
effective search space used: 9034517890008
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)