>GGPP2_ARATH (O04046) Geranylgeranyl pyrophosphate synthetase 2 precursor (GGPP|
           synthetase 2) (GGPS2) [Includes:
           Dimethylallyltranstransferase (EC 2.5.1.1);
           Geranyltranstransferase (EC 2.5.1.10);
           Farnesyltranstransferase (EC 2.5.1.29)]
          Length = 376

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 10/91 (10%)
 Frame = +2

Query: 128 INQSIDHQDQDERKKERKRGENVREKQFT----------SQNLTKHFLVAATVGEGRVL* 277
           ++  I   ++ E ++E + G  V    FT          ++++ K    A  VGE     
Sbjct: 54  LDSPIVEDEEGEEREEEEEGGIVSNANFTFEFDPYMMSKAESVNKALEEAIPVGEP---- 109

Query: 278 AHVYERYNLDLLLAGRRPAVRWCRAGCRLVG 370
             ++E     +L AG+R     C A C LVG
Sbjct: 110 LKIHEAMRYAILAAGKRVRPILCLASCELVG 140

>EAT5_CAEEL (Q27295) Innexin eat-5|
          Length = 423

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 19/63 (30%), Positives = 32/63 (50%)
 Frame = +2

Query: 20  YLYI*SIVGVIYDVYPSIDILLCSSYALLHAKLYRSINQSIDHQDQDERKKERKRGENVR 199
           +LYI  ++     ++ SI   LC +    H KL   + Q +D+QDQDE  +++     V 
Sbjct: 280 FLYIWFLLVFFVTLFDSI--FLCYNMFSSH-KLVEFLQQFLDNQDQDENDEKKPEERKVY 336

Query: 200 EKQ 208
            K+
Sbjct: 337 RKE 339

>EFTU_STRP6 (Q5XD49) Elongation factor Tu (EF-Tu)|
          Length = 398

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 17/66 (25%), Positives = 29/66 (43%)
 Frame = +2

Query: 41  VGVIYDVYPSIDILLCSSYALLHAKLYRSINQSIDHQDQDERKKERKRGENVREKQFTSQ 220
           +G I  V      L  +   +L  +L  S+NQ  D+   D   +ER+RG  +       +
Sbjct: 15  IGTIGHVDHGKTTLTAAITTVLARRLPSSVNQPKDYASIDAAPEERERGITINTAHVEYE 74

Query: 221 NLTKHF 238
             T+H+
Sbjct: 75  TATRHY 80

>EFTU_STRP3 (Q8K872) Elongation factor Tu (EF-Tu)|
          Length = 398

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 17/66 (25%), Positives = 29/66 (43%)
 Frame = +2

Query: 41  VGVIYDVYPSIDILLCSSYALLHAKLYRSINQSIDHQDQDERKKERKRGENVREKQFTSQ 220
           +G I  V      L  +   +L  +L  S+NQ  D+   D   +ER+RG  +       +
Sbjct: 15  IGTIGHVDHGKTTLTAAITTVLARRLPSSVNQPKDYASIDAAPEERERGITINTAHVEYE 74

Query: 221 NLTKHF 238
             T+H+
Sbjct: 75  TATRHY 80

>EFTU_STRP1 (P69952) Elongation factor Tu (EF-Tu)|
          Length = 398

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 17/66 (25%), Positives = 29/66 (43%)
 Frame = +2

Query: 41  VGVIYDVYPSIDILLCSSYALLHAKLYRSINQSIDHQDQDERKKERKRGENVREKQFTSQ 220
           +G I  V      L  +   +L  +L  S+NQ  D+   D   +ER+RG  +       +
Sbjct: 15  IGTIGHVDHGKTTLTAAITTVLARRLPSSVNQPKDYASIDAAPEERERGITINTAHVEYE 74

Query: 221 NLTKHF 238
             T+H+
Sbjct: 75  TATRHY 80


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,544,017
Number of Sequences: 219361
Number of extensions: 871515
Number of successful extensions: 2803
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2799
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3581144924
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)