ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart27b11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009563.1| Triticum aestivum clone wre1n.pk0006.h12:fis, ful... 105 1e-19
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
3dbj|AP003541.3| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
4dbj|AP004737.3| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
5dbj|AK109408.2| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
6ref|NM_188988.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.027
7dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.027
8dbj|AP004761.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.027
9ref|XM_473241.1| Oryza sativa (japonica cultivar-group), predic... 44 0.42
10gb|AC136009.4| Oryza sativa (japonica cultivar-group) chromosome... 44 0.42
11gb|AC150202.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.42
12gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, compl... 44 0.42
13emb|AL663019.2|OSJN00221 Oryza sativa genomic DNA, chromosome 4,... 44 0.42
14dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.42
15dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.42
16dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.42
17dbj|AK061003.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.42
18gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.42
19dbj|D78587.1| Balanus amphitrite gene for G protein-coupled rece... 44 0.42
20dbj|D78363.1| Barnacle gene for G protein-coupled receptor 44 0.42
21gb|AC166992.2| Mus musculus BAC clone RP24-144F18 from chromosom... 42 1.7
22gb|AC161371.4| Mus musculus BAC clone RP23-402N3 from chromosome... 42 1.7
23emb|AL603751.4| Human DNA sequence from clone RP11-84D2 on chrom... 42 1.7
24ref|XM_962354.1| PREDICTED: Tribolium castaneum similar to CG104... 42 1.7
25gb|AF163765.1|AF163765 Allochromatium vinosum putative transcrip... 42 1.7
26gb|AC132126.3| Mus musculus BAC clone RP23-400E10 from 8, comple... 42 1.7
27gb|CP000110.1| Synechococcus sp. CC9605, complete genome 40 6.5
28ref|NM_189356.1| Oryza sativa (japonica cultivar-group), predic... 40 6.5
29gb|BC053286.1| Danio rerio MAK10 homolog, amino-acid N-acetyltra... 40 6.5
30gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 6.5
31gb|AY564125.1| Phytophthora humicola isolate IMI302303 translati... 40 6.5
32gb|AY564111.1| Phytophthora citricola isolate P1817 translation ... 40 6.5
33ref|XM_324221.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.5
34ref|XM_953474.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.5
35ref|XM_954029.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.5
36ref|XM_331454.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.5
37emb|BX511137.14| Zebrafish DNA sequence from clone DKEY-192A11 i... 40 6.5
38gb|AE016828.2| Coxiella burnetii RSA 493, complete genome 40 6.5
39ref|NM_199550.1| Danio rerio MAK10 homolog, amino-acid N-acetylt... 40 6.5
40gb|DQ399851.1| Phytophthora polonica isolate UASWS0199 translati... 40 6.5
41gb|DQ399850.1| Phytophthora polonica isolate UASWS0198 translati... 40 6.5
42gb|DQ399849.1| Phytophthora polonica isolate UASWS0197 translati... 40 6.5
43gb|AC090791.6| Homo sapiens chromosome 11, clone RP11-466I1, com... 40 6.5
44emb|CR391488.1| Gallus gallus finished cDNA, clone ChEST901b24 40 6.5
45dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
46dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
47dbj|AP003263.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
48emb|BX072550.6| Zebrafish DNA sequence from clone DKEY-24P1 in l... 40 6.5
49emb|AJ238974.1|BLA238974 Branchiostoma lanceolatum partial amphi... 40 6.5
50gb|AC163704.4| Gallus gallus BAC clone CH261-114A20 from chromos... 40 6.5
51gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 6.5 
>gb|BT009563.1| Triticum aestivum clone wre1n.pk0006.h12:fis, full insert mRNA
           sequence
          Length = 577

 Score =  105 bits (53), Expect = 1e-19
 Identities = 191/237 (80%)
 Strand = Plus / Minus

                                                                       
Query: 248 acgccgccgacctggttcacctccagcccggtgagcgtctcgaagctgcacatcctcgcc 307
           |||||||||||||  ||||||| ||| | ||| ||| |||| ||||||||||  | | ||
Sbjct: 287 acgccgccgacctaattcacctgcaggctggtaagcatctcaaagctgcacagtcgcacc 228

                                                                       
Query: 308 acctcctcggccacaccggagcgctcctcctcctcgctcagcggcacgccgaggaacccc 367
           |||||||  || |||||||||| |||||| |||| | ||||||| || ||||||||   |
Sbjct: 227 acctcctgagcaacaccggagctctcctcatccttggtcagcgggacaccgaggaatttc 168

                                                                       
Query: 368 gcgagcctcctcaccacccgcgccgggtccgacttgatctcctcgtacctgaggaagagg 427
           || ||| |||||||| |  || |||| || ||||||||||| || ||| | ||||| || 
Sbjct: 167 gccagcttcctcaccgcatgcaccggatcggacttgatctcttcatactttaggaaaaga 108

                                                                    
Query: 428 acggcgtccggcctcgccacgctctcctcccagtactccaggcagtggtcccagaag 484
           ||   ||||||||| ||||||||||||  ||||||||| |||||||| |||||||||
Sbjct: 107 acattgtccggccttgccacgctctccctccagtactcaaggcagtgatcccagaag 51



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 75/92 (81%)
 Strand = Plus / Minus

                                                                       
Query: 122 agcttgtcctggacgatgcggtcgagcttgtccgccatctcgcggctcatgtggttggcc 181
           |||||||  |||||||||||||| | ||  ||| |||||||  ||||||| ||||| |||
Sbjct: 413 agcttgtgttggacgatgcggtccaactcctcccccatctcctggctcatatggtttgcc 354

                                           
Query: 182 cagtccccgacctcgcctttcctgtagaacac 213
           |||||||  || || ||||| ||||| |||||
Sbjct: 353 cagtcccntacttctccttttctgtaaaacac 322
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                       
Query: 388      cgccgggtccgacttgatctcctcgtacctgaggaagag 426
                ||||||||||  ||| |||||||||||||||||||||||
Sbjct: 24908867 cgccgggtcccgcttcatctcctcgtacctgaggaagag 24908905
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>dbj|AP003541.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0530H05
          Length = 145952

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                   
Query: 388  cgccgggtccgacttgatctcctcgtacctgaggaagag 426
            ||||||||||  ||| |||||||||||||||||||||||
Sbjct: 3422 cgccgggtcccgcttcatctcctcgtacctgaggaagag 3460
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>dbj|AP004737.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0072A21
          Length = 158287

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                     
Query: 388    cgccgggtccgacttgatctcctcgtacctgaggaagag 426
              ||||||||||  ||| |||||||||||||||||||||||
Sbjct: 119950 cgccgggtcccgcttcatctcctcgtacctgaggaagag 119988
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>dbj|AK109408.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D04, full
           insert sequence
          Length = 1274

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 388 cgccgggtccgacttgatctcctcgtacctgaggaagag 426
           ||||||||||  ||| |||||||||||||||||||||||
Sbjct: 815 cgccgggtcccgcttcatctcctcgtacctgaggaagag 777
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>ref|NM_188988.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 999

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 285 tctcgaagctgcacatcctcgccacctcctcg 316
           ||||||||||||||| |||| |||||||||||
Sbjct: 805 tctcgaagctgcacagcctcaccacctcctcg 774
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                                
Query: 285      tctcgaagctgcacatcctcgccacctcctcg 316
                ||||||||||||||| |||| |||||||||||
Sbjct: 25557395 tctcgaagctgcacagcctcaccacctcctcg 25557426



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                          
Query: 181      ccagtccccgacctcgcctttcctgtagaacaccgagttctc 222
                |||||||||||| || ||||| ||| | ||||||||||||||
Sbjct: 25527607 ccagtccccgacttcaccttttctgaaaaacaccgagttctc 25527648



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 285      tctcgaagctgcacatcctcgccacctcctcg 316
                ||||||||||||||| |||| | |||||||||
Sbjct: 25527711 tctcgaagctgcacagcctcacaacctcctcg 25527742
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>dbj|AP004761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0686C03
          Length = 164529

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 285   tctcgaagctgcacatcctcgccacctcctcg 316
             ||||||||||||||| |||| |||||||||||
Sbjct: 44086 tctcgaagctgcacagcctcaccacctcctcg 44117



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                       
Query: 181   ccagtccccgacctcgcctttcctgtagaacaccgagttctc 222
             |||||||||||| || ||||| ||| | ||||||||||||||
Sbjct: 14298 ccagtccccgacttcaccttttctgaaaaacaccgagttctc 14339



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 285   tctcgaagctgcacatcctcgccacctcctcg 316
             ||||||||||||||| |||| | |||||||||
Sbjct: 14402 tctcgaagctgcacagcctcacaacctcctcg 14433
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>ref|XM_473241.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1041

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 404 atctcctcgtacctgaggaagaggac 429
           |||||||||||||||| |||||||||
Sbjct: 725 atctcctcgtacctgaagaagaggac 700
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>gb|AC136009.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0025K21,
              complete sequence
          Length = 146539

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 404    atctcctcgtacctgaggaagaggac 429
              ||||||||||||| ||||||||||||
Sbjct: 116399 atctcctcgtaccggaggaagaggac 116374
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>gb|AC150202.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone B1024A10,
              complete sequence
          Length = 157609

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 404    atctcctcgtacctgaggaagaggac 429
              ||||||||||||| ||||||||||||
Sbjct: 142392 atctcctcgtaccggaggaagaggac 142367
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>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence
          Length = 1471779

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 343    gctcagcggcacgccgaggaac 364
              ||||||||||||||||||||||
Sbjct: 236910 gctcagcggcacgccgaggaac 236889
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>emb|AL663019.2|OSJN00221 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0038O10,
             complete sequence
          Length = 141545

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 404   atctcctcgtacctgaggaagaggac 429
             |||||||||||||||| |||||||||
Sbjct: 71192 atctcctcgtacctgaagaagaggac 71167
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 404      atctcctcgtacctgaggaagaggac 429
                |||||||||||||||| |||||||||
Sbjct: 26294615 atctcctcgtacctgaagaagaggac 26294590
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 404      atctcctcgtacctgaggaagaggac 429
                ||||||||||||| ||||||||||||
Sbjct: 17387617 atctcctcgtaccggaggaagaggac 17387592
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>dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0711H09
          Length = 185858

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                        
Query: 181    ccagtccccgacctcgcctttcctgtagaacaccgagttctc 222
              |||||||||||| || ||||| ||| | ||||||||||||||
Sbjct: 158923 ccagtccccgacttcaccttttctgaaaaacaccgagttctc 158964



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 285    tctcgaagctgcacatcctcgccacctcctcg 316
              ||||||||||||||| |||| | |||||||||
Sbjct: 159027 tctcgaagctgcacagcctcacaacctcctcg 159058
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>dbj|AK061003.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-H02, full
           insert sequence
          Length = 1222

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 404 atctcctcgtacctgaggaagaggac 429
           ||||||||||||| ||||||||||||
Sbjct: 843 atctcctcgtaccggaggaagaggac 818
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 404      atctcctcgtacctgaggaagaggac 429
                ||||||||||||| ||||||||||||
Sbjct: 17481327 atctcctcgtaccggaggaagaggac 17481302
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>dbj|D78587.1| Balanus amphitrite gene for G protein-coupled receptor, complete cds
          Length = 3562

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 349  cggcacgccgaggaaccccgcgagcc 374
            |||||||||||||| |||||||||||
Sbjct: 2162 cggcacgccgaggagccccgcgagcc 2137
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>dbj|D78363.1| Barnacle gene for G protein-coupled receptor
          Length = 1431

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 349 cggcacgccgaggaaccccgcgagcc 374
           |||||||||||||| |||||||||||
Sbjct: 566 cggcacgccgaggagccccgcgagcc 541
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>gb|AC166992.2| Mus musculus BAC clone RP24-144F18 from chromosome 9, complete
            sequence
          Length = 193799

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 111  ctgacccctgcagcttgtcct 131
            |||||||||||||||||||||
Sbjct: 2291 ctgacccctgcagcttgtcct 2271
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>gb|AC161371.4| Mus musculus BAC clone RP23-402N3 from chromosome 9, complete sequence
          Length = 203708

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 111   ctgacccctgcagcttgtcct 131
             |||||||||||||||||||||
Sbjct: 50072 ctgacccctgcagcttgtcct 50092
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>emb|AL603751.4| Human DNA sequence from clone RP11-84D2 on chromosome 6, complete
             sequence
          Length = 33473

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 61    agagcagagtggaaaagacca 81
             |||||||||||||||||||||
Sbjct: 11077 agagcagagtggaaaagacca 11097
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>ref|XM_962354.1| PREDICTED: Tribolium castaneum similar to CG10465-PA (LOC655793),
           mRNA
          Length = 1489

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 323 ccggagcgctcctcctcctcg 343
           |||||||||||||||||||||
Sbjct: 908 ccggagcgctcctcctcctcg 888
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>gb|AF163765.1|AF163765 Allochromatium vinosum putative transcriptional regulator CysB (cysB)
            gene, partial cds; hydrogen sulfide:ferredoxin
            oxidoreductase (cysI), APS reductase (cysH), putative ATP
            sulfurylase small subunit (cysD), and putative ATP
            sulfurylase large subunit (cysN) genes, complete cds; and
            putative selenophosphate synthase (selD) gene, partial
            cds
          Length = 5693

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 242  tggctgacgccgccgacctgg 262
            |||||||||||||||||||||
Sbjct: 4504 tggctgacgccgccgacctgg 4484
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>gb|AC132126.3| Mus musculus BAC clone RP23-400E10 from 8, complete sequence
          Length = 204800

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 111   ctgacccctgcagcttgtcct 131
             |||||||||||||||||||||
Sbjct: 49862 ctgacccctgcagcttgtcct 49842
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>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 264    tcacctccagcccggtgagc 283
              ||||||||||||||||||||
Sbjct: 699917 tcacctccagcccggtgagc 699936
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>ref|NM_189356.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 795

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 317 gccacaccggagcgctcctcctcctcgc 344
           |||| ||| |||||||||||||||||||
Sbjct: 160 gccaaacccgagcgctcctcctcctcgc 187
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>gb|BC053286.1| Danio rerio MAK10 homolog, amino-acid N-acetyltransferase subunit,
            (S. cerevisiae), mRNA (cDNA clone MGC:64157
            IMAGE:6797204), complete cds
          Length = 2467

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 332  tcctcctcctcgctcagcgg 351
            ||||||||||||||||||||
Sbjct: 1995 tcctcctcctcgctcagcgg 2014
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 349     cggcacgccgaggaaccccg 368
               ||||||||||||||||||||
Sbjct: 2602052 cggcacgccgaggaaccccg 2602033
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>gb|AY564125.1| Phytophthora humicola isolate IMI302303 translation elongation
           factor 1 alpha (EF-1alpha) gene, partial cds
          Length = 930

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 395 tccgacttgatctcctcgta 414
           ||||||||||||||||||||
Sbjct: 287 tccgacttgatctcctcgta 268
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>gb|AY564111.1| Phytophthora citricola isolate P1817 translation elongation factor
           1 alpha (EF-1alpha) gene, partial cds
          Length = 930

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 395 tccgacttgatctcctcgta 414
           ||||||||||||||||||||
Sbjct: 287 tccgacttgatctcctcgta 268
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>ref|XM_324221.1| Neurospora crassa OR74A hypothetical protein (NCU04865.1) partial
            mRNA
          Length = 7725

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 328  gcgctcctcctcctcgctca 347
            ||||||||||||||||||||
Sbjct: 4785 gcgctcctcctcctcgctca 4766
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>ref|XM_953474.1| Neurospora crassa OR74A hypothetical protein (NCU09063.1) partial
            mRNA
          Length = 4935

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 139  gcggtcgagcttgtccgcca 158
            ||||||||||||||||||||
Sbjct: 2403 gcggtcgagcttgtccgcca 2422
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>ref|XM_954029.1| Neurospora crassa OR74A hypothetical protein (NCU04865.1) partial
            mRNA
          Length = 7725

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 328  gcgctcctcctcctcgctca 347
            ||||||||||||||||||||
Sbjct: 4785 gcgctcctcctcctcgctca 4766
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>ref|XM_331454.1| Neurospora crassa OR74A hypothetical protein (NCU09063.1) partial
            mRNA
          Length = 4935

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 139  gcggtcgagcttgtccgcca 158
            ||||||||||||||||||||
Sbjct: 2403 gcggtcgagcttgtccgcca 2422
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>emb|BX511137.14| Zebrafish DNA sequence from clone DKEY-192A11 in linkage group 7,
             complete sequence
          Length = 214145

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    agtggaaaagaccacagata 87
             ||||||||||||||||||||
Sbjct: 28652 agtggaaaagaccacagata 28633
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>gb|AE016828.2| Coxiella burnetii RSA 493, complete genome
          Length = 1995281

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 83      agataacagatgactcagaa 102
               ||||||||||||||||||||
Sbjct: 1554083 agataacagatgactcagaa 1554102
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>ref|NM_199550.1| Danio rerio MAK10 homolog, amino-acid N-acetyltransferase subunit,
            (S. cerevisiae) (mak10), mRNA
          Length = 2467

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 332  tcctcctcctcgctcagcgg 351
            ||||||||||||||||||||
Sbjct: 1995 tcctcctcctcgctcagcgg 2014
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>gb|DQ399851.1| Phytophthora polonica isolate UASWS0199 translation elongation
           factor 1 alpha gene, partial cds
          Length = 936

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 395 tccgacttgatctcctcgta 414
           ||||||||||||||||||||
Sbjct: 293 tccgacttgatctcctcgta 274
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>gb|DQ399850.1| Phytophthora polonica isolate UASWS0198 translation elongation
           factor 1 alpha gene, partial cds
          Length = 936

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 395 tccgacttgatctcctcgta 414
           ||||||||||||||||||||
Sbjct: 293 tccgacttgatctcctcgta 274
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>gb|DQ399849.1| Phytophthora polonica isolate UASWS0197 translation elongation
           factor 1 alpha gene, partial cds
          Length = 936

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 395 tccgacttgatctcctcgta 414
           ||||||||||||||||||||
Sbjct: 293 tccgacttgatctcctcgta 274
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>gb|AC090791.6| Homo sapiens chromosome 11, clone RP11-466I1, complete sequence
          Length = 172865

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 34     ttcccaaaattaaaccacaa 53
              ||||||||||||||||||||
Sbjct: 166640 ttcccaaaattaaaccacaa 166659
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>emb|CR391488.1| Gallus gallus finished cDNA, clone ChEST901b24
          Length = 921

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 329 cgctcctcctcctcgctcag 348
           ||||||||||||||||||||
Sbjct: 518 cgctcctcctcctcgctcag 499
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 317      gccacaccggagcgctcctcctcctcgc 344
                |||| ||| |||||||||||||||||||
Sbjct: 42356014 gccaaacccgagcgctcctcctcctcgc 42355987
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>dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0401G10
          Length = 160704

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 317    gccacaccggagcgctcctcctcctcgc 344
              |||| ||| |||||||||||||||||||
Sbjct: 127971 gccaaacccgagcgctcctcctcctcgc 127944
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>dbj|AP003263.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0483G10
          Length = 190721

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 317   gccacaccggagcgctcctcctcctcgc 344
             |||| ||| |||||||||||||||||||
Sbjct: 15352 gccaaacccgagcgctcctcctcctcgc 15325
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>emb|BX072550.6| Zebrafish DNA sequence from clone DKEY-24P1 in linkage group 15, complete
              sequence
          Length = 229061

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 102    acagcaggcctgacccctgc 121
              ||||||||||||||||||||
Sbjct: 199942 acagcaggcctgacccctgc 199923
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>emb|AJ238974.1|BLA238974 Branchiostoma lanceolatum partial amphipax1 gene, exons 1-2 and
            joined CDS
          Length = 2753

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 248  acgccgccgacctggttcacctcc 271
            |||||||||| |||||||||||||
Sbjct: 2069 acgccgccgagctggttcacctcc 2046
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>gb|AC163704.4| Gallus gallus BAC clone CH261-114A20 from chromosome ul, complete
             sequence
          Length = 198816

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 202   cctgtagaacaccgagttctcaac 225
             |||||||||||| |||||||||||
Sbjct: 56122 cctgtagaacacagagttctcaac 56145
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 329     cgctcctcctcctcgctcag 348
               ||||||||||||||||||||
Sbjct: 2506241 cgctcctcctcctcgctcag 2506222


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,688,591
Number of Sequences: 3902068
Number of extensions: 4688591
Number of successful extensions: 88678
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88176
Number of HSP's gapped (non-prelim): 501
length of query: 484
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 462
effective length of database: 17,147,199,772
effective search space: 7922006294664
effective search space used: 7922006294664
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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