Clone Name | rbart27b10 |
---|---|
Clone Library Name | barley_pub |
>C74A4_ORYSA (Q6Z6K9) Cytochrome P450 74A4 (EC 4.2.1.92) (Allene oxide synthase| 4) (Hydroperoxide dehydrase 4) Length = 510 Score = 119 bits (299), Expect = 3e-27 Identities = 60/81 (74%), Positives = 65/81 (80%), Gaps = 4/81 (4%) Frame = -3 Query: 439 FVGGEGR----LLGNVVWSNGPENSEPAEGNKQCPGKDMVTAVGRLMVAELFRRYDTFTA 272 FV G G LL +VVWSNGPE P+EGNKQCPGKDMV AVGRLMVA LFRRYDTF A Sbjct: 421 FVSGAGSAARPLLEHVVWSNGPETGTPSEGNKQCPGKDMVVAVGRLMVAGLFRRYDTFAA 480 Query: 271 DVKEMPLEPVVTFTSLTTRAE 209 DV+E+PLEPVVTFTSLT A+ Sbjct: 481 DVEELPLEPVVTFTSLTRAAD 501
>C74A3_ORYSA (Q6Z6L1) Cytochrome P450 74A3 (EC 4.2.1.92) (Allene oxide synthase| 3) (Hydroperoxide dehydrase 3) Length = 500 Score = 116 bits (291), Expect = 2e-26 Identities = 56/70 (80%), Positives = 60/70 (85%) Frame = -3 Query: 430 GEGRLLGNVVWSNGPENSEPAEGNKQCPGKDMVTAVGRLMVAELFRRYDTFTADVKEMPL 251 G+ LL +VVWSNGPE P+EGNKQCPGKDMV AVGRLMVAELFRRYDTF ADV E P+ Sbjct: 426 GDRPLLEHVVWSNGPETRAPSEGNKQCPGKDMVVAVGRLMVAELFRRYDTFAADVVEAPV 485 Query: 250 EPVVTFTSLT 221 EPVVTFTSLT Sbjct: 486 EPVVTFTSLT 495
>CP74A_ARATH (Q96242) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)| (Allene oxide synthase) (Hydroperoxide dehydrase) Length = 518 Score = 83.2 bits (204), Expect = 3e-16 Identities = 42/73 (57%), Positives = 49/73 (67%), Gaps = 1/73 (1%) Frame = -3 Query: 439 FVGGEG-RLLGNVVWSNGPENSEPAEGNKQCPGKDMVTAVGRLMVAELFRRYDTFTADVK 263 FVG EG +LL +V+WSNGPE P GNKQC GKD V V RL V E+FRRYD+F +V Sbjct: 441 FVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDSFDIEVG 500 Query: 262 EMPLEPVVTFTSL 224 PL V F+SL Sbjct: 501 TSPLGSSVNFSSL 513
>C74A2_PARAR (Q40778) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase)| (Rubber particle protein) (RPP) Length = 473 Score = 76.3 bits (186), Expect = 3e-14 Identities = 39/72 (54%), Positives = 43/72 (59%) Frame = -3 Query: 439 FVGGEGRLLGNVVWSNGPENSEPAEGNKQCPGKDMVTAVGRLMVAELFRRYDTFTADVKE 260 FVG LL V WSNGPE P NKQC GKD V + RL V ELFRRYD+F ++ E Sbjct: 397 FVGDGEALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRYDSFEIELGE 456 Query: 259 MPLEPVVTFTSL 224 PL VT T L Sbjct: 457 SPLGAAVTLTFL 468
>C74A2_ORYSA (Q7XYS3) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase| 2) (Hydroperoxide dehydrase 2) Length = 478 Score = 75.5 bits (184), Expect = 6e-14 Identities = 37/58 (63%), Positives = 43/58 (74%), Gaps = 1/58 (1%) Frame = -3 Query: 439 FVGGEGR-LLGNVVWSNGPENSEPAEGNKQCPGKDMVTAVGRLMVAELFRRYDTFTAD 269 FVG EGR LL V WSNG E P+ NKQCPGK++V VGRL++ ELF RYDTFTA+ Sbjct: 399 FVGEEGRKLLQYVYWSNGRETENPSVDNKQCPGKNLVVLVGRLLLVELFLRYDTFTAE 456
>C74A1_ORYSA (Q7Y0C8) Cytochrome P450 74A1, chloroplast precursor (EC 4.2.1.92)| (Allene oxide synthase 1) (Hydroperoxide dehydrase 1) Length = 512 Score = 74.3 bits (181), Expect = 1e-13 Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 1/73 (1%) Frame = -3 Query: 439 FVGGEG-RLLGNVVWSNGPENSEPAEGNKQCPGKDMVTAVGRLMVAELFRRYDTFTADVK 263 F+G +G RLL +VVWSNGPE + P +KQC GKD V V RL++ ELF RYD+F +V Sbjct: 435 FLGEDGARLLRHVVWSNGPETAAPTLHDKQCAGKDFVVLVARLLLVELFLRYDSFDVEVG 494 Query: 262 EMPLEPVVTFTSL 224 L VT TSL Sbjct: 495 TSTLGSSVTVTSL 507
>CP74_LINUS (P48417) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)| (Allene oxide synthase) (Hydroperoxide dehydrase) Length = 536 Score = 73.9 bits (180), Expect = 2e-13 Identities = 36/72 (50%), Positives = 44/72 (61%) Frame = -3 Query: 439 FVGGEGRLLGNVVWSNGPENSEPAEGNKQCPGKDMVTAVGRLMVAELFRRYDTFTADVKE 260 FVG +L+ V+WSNGPE P+ NKQC GKD V RL V ELF+RYD+F +V Sbjct: 460 FVGEGVKLMEYVMWSNGPETETPSVANKQCAGKDFVVMAARLFVVELFKRYDSFDIEVGT 519 Query: 259 MPLEPVVTFTSL 224 L +T TSL Sbjct: 520 SSLGASITLTSL 531
>GUNA_PSEFL (P10476) Endoglucanase A precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Cellulase) (EGA) Length = 962 Score = 32.3 bits (72), Expect = 0.54 Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 4/66 (6%) Frame = +3 Query: 105 GLASST----VYYSNYYCGSAGATWQLHYSSTVCYYYSHSALVVSEVNVTTGSSGISFTS 272 G+A+ T VY+S+Y+ GS+ + ++ SS+ S SA+V S +V + SS S S Sbjct: 804 GVATETTFVSVYFSDYFPGSSSSASNINSSSSSSSSSSSSAIVSSSSSVVSSSSS-SAAS 862 Query: 273 AVNVSY 290 N Y Sbjct: 863 GGNCQY 868
>EG52_XENLA (Q91783) Kinesin-related motor protein Eg5 2| Length = 1067 Score = 29.6 bits (65), Expect = 3.5 Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 3/66 (4%) Frame = +3 Query: 132 SNYYCGSAGATWQLHYSSTVCYYYSHSALVVS---EVNVTTGSSGISFTSAVNVSYRRNS 302 S +C SAG VCY +S + + +V GSS + T VNV + Sbjct: 826 SQQWCESAGQKMDSLLEEQVCYLHSSKKQIQTLHKDVEDGCGSSVVEITDRVNVQCQAQE 885 Query: 303 SATISL 320 A SL Sbjct: 886 KALTSL 891
>YVED_VACCC (P20556) Hypothetical 7.6 kDa protein| Length = 66 Score = 29.3 bits (64), Expect = 4.5 Identities = 16/35 (45%), Positives = 21/35 (60%) Frame = -3 Query: 325 VGRLMVAELFRRYDTFTADVKEMPLEPVVTFTSLT 221 VGR AE FRRYDT+ + + + V TF+S T Sbjct: 13 VGR---AENFRRYDTYLPENDPLAMNSVFTFSSYT 44
>PRXV_ASCNO (P81701) Vanadium haloperoxidase (EC 1.11.1.-) (V-BPO)| Length = 557 Score = 28.5 bits (62), Expect = 7.7 Identities = 13/42 (30%), Positives = 21/42 (50%) Frame = +3 Query: 270 SAVNVSYRRNSSATISLPTAVTMSFPGHCLFPSAGSLFSGPF 395 +A+N + N+ T LP A+ P H +PS + +G F Sbjct: 384 AAINAAQNPNNEVTYLLPQAIQEGSPTHPSYPSGHATQNGAF 425
>C78AB_ORYSA (Q7Y1V5) Cytochrome P450 78A11 (EC 1.14.-.-) (PLASTOCHRON1 protein)| Length = 555 Score = 28.5 bits (62), Expect = 7.7 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = -3 Query: 364 GNKQCPGKDMVTAVGRLMVAELFRRYDTFTAD 269 G + CPGK++ A L VA L +D F D Sbjct: 491 GRRVCPGKNLGLATVTLWVARLVHAFDWFLPD 522
>TXND3_ANTCR (P90666) Thioredoxin domain-containing protein 3 homolog| (Intermediate chain 1) Length = 837 Score = 28.5 bits (62), Expect = 7.7 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = -2 Query: 371 GGGEQAVPREGHGDGGWEANGG 306 GGGE+AV EG G+G + GG Sbjct: 806 GGGEEAVATEGGGEGDAKPEGG 827
>SYA_PROMA (Q7VEG5) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 892 Score = 28.5 bits (62), Expect = 7.7 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = +3 Query: 195 YYYSHSALVVSEVNVTTGSSGISFTSAVNVSYRRNSSATIS 317 YY H L E+++ + I F + V + Y RNSS T++ Sbjct: 184 YYDFHPELGEEEIDLEDDTRFIEFYNLVFMQYNRNSSGTLT 224 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,396,578 Number of Sequences: 219361 Number of extensions: 817271 Number of successful extensions: 2504 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 2384 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2499 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2628831825 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)