ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart27b10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1C74A4_ORYSA (Q6Z6K9) Cytochrome P450 74A4 (EC 4.2.1.92) (Allene ... 119 3e-27
2C74A3_ORYSA (Q6Z6L1) Cytochrome P450 74A3 (EC 4.2.1.92) (Allene ... 116 2e-26
3CP74A_ARATH (Q96242) Cytochrome P450 74A, chloroplast precursor ... 83 3e-16
4C74A2_PARAR (Q40778) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene ... 76 3e-14
5C74A2_ORYSA (Q7XYS3) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene ... 75 6e-14
6C74A1_ORYSA (Q7Y0C8) Cytochrome P450 74A1, chloroplast precursor... 74 1e-13
7CP74_LINUS (P48417) Cytochrome P450 74A, chloroplast precursor (... 74 2e-13
8GUNA_PSEFL (P10476) Endoglucanase A precursor (EC 3.2.1.4) (Endo... 32 0.54
9EG52_XENLA (Q91783) Kinesin-related motor protein Eg5 2 30 3.5
10YVED_VACCC (P20556) Hypothetical 7.6 kDa protein 29 4.5
11PRXV_ASCNO (P81701) Vanadium haloperoxidase (EC 1.11.1.-) (V-BPO) 28 7.7
12C78AB_ORYSA (Q7Y1V5) Cytochrome P450 78A11 (EC 1.14.-.-) (PLASTO... 28 7.7
13TXND3_ANTCR (P90666) Thioredoxin domain-containing protein 3 hom... 28 7.7
14SYA_PROMA (Q7VEG5) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-... 28 7.7

>C74A4_ORYSA (Q6Z6K9) Cytochrome P450 74A4 (EC 4.2.1.92) (Allene oxide synthase|
           4) (Hydroperoxide dehydrase 4)
          Length = 510

 Score =  119 bits (299), Expect = 3e-27
 Identities = 60/81 (74%), Positives = 65/81 (80%), Gaps = 4/81 (4%)
 Frame = -3

Query: 439 FVGGEGR----LLGNVVWSNGPENSEPAEGNKQCPGKDMVTAVGRLMVAELFRRYDTFTA 272
           FV G G     LL +VVWSNGPE   P+EGNKQCPGKDMV AVGRLMVA LFRRYDTF A
Sbjct: 421 FVSGAGSAARPLLEHVVWSNGPETGTPSEGNKQCPGKDMVVAVGRLMVAGLFRRYDTFAA 480

Query: 271 DVKEMPLEPVVTFTSLTTRAE 209
           DV+E+PLEPVVTFTSLT  A+
Sbjct: 481 DVEELPLEPVVTFTSLTRAAD 501



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>C74A3_ORYSA (Q6Z6L1) Cytochrome P450 74A3 (EC 4.2.1.92) (Allene oxide synthase|
           3) (Hydroperoxide dehydrase 3)
          Length = 500

 Score =  116 bits (291), Expect = 2e-26
 Identities = 56/70 (80%), Positives = 60/70 (85%)
 Frame = -3

Query: 430 GEGRLLGNVVWSNGPENSEPAEGNKQCPGKDMVTAVGRLMVAELFRRYDTFTADVKEMPL 251
           G+  LL +VVWSNGPE   P+EGNKQCPGKDMV AVGRLMVAELFRRYDTF ADV E P+
Sbjct: 426 GDRPLLEHVVWSNGPETRAPSEGNKQCPGKDMVVAVGRLMVAELFRRYDTFAADVVEAPV 485

Query: 250 EPVVTFTSLT 221
           EPVVTFTSLT
Sbjct: 486 EPVVTFTSLT 495



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>CP74A_ARATH (Q96242) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)|
           (Allene oxide synthase) (Hydroperoxide dehydrase)
          Length = 518

 Score = 83.2 bits (204), Expect = 3e-16
 Identities = 42/73 (57%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
 Frame = -3

Query: 439 FVGGEG-RLLGNVVWSNGPENSEPAEGNKQCPGKDMVTAVGRLMVAELFRRYDTFTADVK 263
           FVG EG +LL +V+WSNGPE   P  GNKQC GKD V  V RL V E+FRRYD+F  +V 
Sbjct: 441 FVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDSFDIEVG 500

Query: 262 EMPLEPVVTFTSL 224
             PL   V F+SL
Sbjct: 501 TSPLGSSVNFSSL 513



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>C74A2_PARAR (Q40778) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase)|
           (Rubber particle protein) (RPP)
          Length = 473

 Score = 76.3 bits (186), Expect = 3e-14
 Identities = 39/72 (54%), Positives = 43/72 (59%)
 Frame = -3

Query: 439 FVGGEGRLLGNVVWSNGPENSEPAEGNKQCPGKDMVTAVGRLMVAELFRRYDTFTADVKE 260
           FVG    LL  V WSNGPE   P   NKQC GKD V  + RL V ELFRRYD+F  ++ E
Sbjct: 397 FVGDGEALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRYDSFEIELGE 456

Query: 259 MPLEPVVTFTSL 224
            PL   VT T L
Sbjct: 457 SPLGAAVTLTFL 468



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>C74A2_ORYSA (Q7XYS3) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase|
           2) (Hydroperoxide dehydrase 2)
          Length = 478

 Score = 75.5 bits (184), Expect = 6e-14
 Identities = 37/58 (63%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
 Frame = -3

Query: 439 FVGGEGR-LLGNVVWSNGPENSEPAEGNKQCPGKDMVTAVGRLMVAELFRRYDTFTAD 269
           FVG EGR LL  V WSNG E   P+  NKQCPGK++V  VGRL++ ELF RYDTFTA+
Sbjct: 399 FVGEEGRKLLQYVYWSNGRETENPSVDNKQCPGKNLVVLVGRLLLVELFLRYDTFTAE 456



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>C74A1_ORYSA (Q7Y0C8) Cytochrome P450 74A1, chloroplast precursor (EC 4.2.1.92)|
           (Allene oxide synthase 1) (Hydroperoxide dehydrase 1)
          Length = 512

 Score = 74.3 bits (181), Expect = 1e-13
 Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
 Frame = -3

Query: 439 FVGGEG-RLLGNVVWSNGPENSEPAEGNKQCPGKDMVTAVGRLMVAELFRRYDTFTADVK 263
           F+G +G RLL +VVWSNGPE + P   +KQC GKD V  V RL++ ELF RYD+F  +V 
Sbjct: 435 FLGEDGARLLRHVVWSNGPETAAPTLHDKQCAGKDFVVLVARLLLVELFLRYDSFDVEVG 494

Query: 262 EMPLEPVVTFTSL 224
              L   VT TSL
Sbjct: 495 TSTLGSSVTVTSL 507



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>CP74_LINUS (P48417) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)|
           (Allene oxide synthase) (Hydroperoxide dehydrase)
          Length = 536

 Score = 73.9 bits (180), Expect = 2e-13
 Identities = 36/72 (50%), Positives = 44/72 (61%)
 Frame = -3

Query: 439 FVGGEGRLLGNVVWSNGPENSEPAEGNKQCPGKDMVTAVGRLMVAELFRRYDTFTADVKE 260
           FVG   +L+  V+WSNGPE   P+  NKQC GKD V    RL V ELF+RYD+F  +V  
Sbjct: 460 FVGEGVKLMEYVMWSNGPETETPSVANKQCAGKDFVVMAARLFVVELFKRYDSFDIEVGT 519

Query: 259 MPLEPVVTFTSL 224
             L   +T TSL
Sbjct: 520 SSLGASITLTSL 531



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>GUNA_PSEFL (P10476) Endoglucanase A precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase) (Cellulase) (EGA)
          Length = 962

 Score = 32.3 bits (72), Expect = 0.54
 Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
 Frame = +3

Query: 105 GLASST----VYYSNYYCGSAGATWQLHYSSTVCYYYSHSALVVSEVNVTTGSSGISFTS 272
           G+A+ T    VY+S+Y+ GS+ +   ++ SS+     S SA+V S  +V + SS  S  S
Sbjct: 804 GVATETTFVSVYFSDYFPGSSSSASNINSSSSSSSSSSSSAIVSSSSSVVSSSSS-SAAS 862

Query: 273 AVNVSY 290
             N  Y
Sbjct: 863 GGNCQY 868



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>EG52_XENLA (Q91783) Kinesin-related motor protein Eg5 2|
          Length = 1067

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
 Frame = +3

Query: 132  SNYYCGSAGATWQLHYSSTVCYYYSHSALVVS---EVNVTTGSSGISFTSAVNVSYRRNS 302
            S  +C SAG          VCY +S    + +   +V    GSS +  T  VNV  +   
Sbjct: 826  SQQWCESAGQKMDSLLEEQVCYLHSSKKQIQTLHKDVEDGCGSSVVEITDRVNVQCQAQE 885

Query: 303  SATISL 320
             A  SL
Sbjct: 886  KALTSL 891



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>YVED_VACCC (P20556) Hypothetical 7.6 kDa protein|
          Length = 66

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = -3

Query: 325 VGRLMVAELFRRYDTFTADVKEMPLEPVVTFTSLT 221
           VGR   AE FRRYDT+  +   + +  V TF+S T
Sbjct: 13  VGR---AENFRRYDTYLPENDPLAMNSVFTFSSYT 44



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>PRXV_ASCNO (P81701) Vanadium haloperoxidase (EC 1.11.1.-) (V-BPO)|
          Length = 557

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +3

Query: 270 SAVNVSYRRNSSATISLPTAVTMSFPGHCLFPSAGSLFSGPF 395
           +A+N +   N+  T  LP A+    P H  +PS  +  +G F
Sbjct: 384 AAINAAQNPNNEVTYLLPQAIQEGSPTHPSYPSGHATQNGAF 425



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>C78AB_ORYSA (Q7Y1V5) Cytochrome P450 78A11 (EC 1.14.-.-) (PLASTOCHRON1 protein)|
          Length = 555

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -3

Query: 364 GNKQCPGKDMVTAVGRLMVAELFRRYDTFTAD 269
           G + CPGK++  A   L VA L   +D F  D
Sbjct: 491 GRRVCPGKNLGLATVTLWVARLVHAFDWFLPD 522



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>TXND3_ANTCR (P90666) Thioredoxin domain-containing protein 3 homolog|
           (Intermediate chain 1)
          Length = 837

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -2

Query: 371 GGGEQAVPREGHGDGGWEANGG 306
           GGGE+AV  EG G+G  +  GG
Sbjct: 806 GGGEEAVATEGGGEGDAKPEGG 827



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>SYA_PROMA (Q7VEG5) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 892

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +3

Query: 195 YYYSHSALVVSEVNVTTGSSGISFTSAVNVSYRRNSSATIS 317
           YY  H  L   E+++   +  I F + V + Y RNSS T++
Sbjct: 184 YYDFHPELGEEEIDLEDDTRFIEFYNLVFMQYNRNSSGTLT 224


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,396,578
Number of Sequences: 219361
Number of extensions: 817271
Number of successful extensions: 2504
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2499
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2628831825
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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