ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart27b10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_464670.1| Oryza sativa (japonica cultivar-group), mRNA 204 2e-49
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 204 2e-49
3dbj|AP004996.3| Oryza sativa (japonica cultivar-group) genomic D... 204 2e-49
4dbj|AK107161.1| Oryza sativa (japonica cultivar-group) cDNA clon... 204 2e-49
5ref|XM_464672.1| Oryza sativa (japonica cultivar-group), mRNA 198 1e-47
6dbj|AK105964.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 1e-47
7gb|BT009396.1| Triticum aestivum clone wlm96.pk039.g16:fis, full... 52 0.002
8emb|AJ318870.1|HVU318870 Hordeum vulgare mRNA for fatty acid hyd... 46 0.096
9gb|AY540745.1| Zea mays hydroperoxide lyase (HPL) mRNA, complete... 44 0.38
10gb|AY196004.1| Triticum aestivum allene oxide synthase (TaAOS) m... 44 0.38
11gb|AY104568.1| Zea mays PCO137115 mRNA sequence 44 0.38
12gb|AY325570.1| Uncultured bacterium clone GG12 putative dissimil... 42 1.5
13gb|AC092351.3| Homo sapiens chromosome 16 clone RP11-2L4, comple... 42 1.5
14gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 42 1.5
15gb|BC073876.1| Homo sapiens syntaxin 16, mRNA (cDNA clone MGC:90... 40 5.9
16ref|XM_514749.1| PREDICTED: Pan troglodytes LOC458368 (LOC458368... 40 5.9
17ref|NM_187610.1| Oryza sativa (japonica cultivar-group), predic... 40 5.9
18ref|XM_463821.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.9
19gb|BC019042.2| Homo sapiens syntaxin 16, transcript variant 2, m... 40 5.9
20gb|AC128643.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.9
21ref|NM_003763.3| Homo sapiens syntaxin 16 (STX16), transcript va... 40 5.9
22ref|NM_001001433.1| Homo sapiens syntaxin 16 (STX16), transcript... 40 5.9
23gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.9
24gb|AY062258.1| Oryza sativa (japonica cultivar-group) dev-stage ... 40 5.9
25gb|AC107226.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.9
26gb|AC093709.2| Pan troglodytes clone RP43-180A19, complete sequence 40 5.9
27gb|AY340220.1| Oryza sativa (japonica cultivar-group) hydroperox... 40 5.9
28emb|AL139349.36| Human DNA sequence from clone RP11-261P9 on chr... 40 5.9
29gb|AC094014.3| Papio anubis clone RP41-371B12, complete sequence 40 5.9
30gb|AY310358.1| Oryza sativa (japonica cultivar-group) allene oxi... 40 5.9
31emb|CR857623.1| Pongo pygmaeus mRNA; cDNA DKFZp459J1550 (from cl... 40 5.9
32gb|AC004491.2| Homo sapiens BAC clone CTB-139P11 from 7q11-q21, ... 40 5.9
33gb|AF428146.1|AF428146 Homo sapiens syntaxin-16D mRNA, complete cds 40 5.9
34dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
35dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
36gb|AC018764.8| Homo sapiens chromosome 5 clone CTD-2327L5, compl... 40 5.9
37dbj|AP004752.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
38dbj|AK026970.1| Homo sapiens cDNA: FLJ23317 fis, clone HEP12062,... 40 5.9
39dbj|AK105694.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.9
40emb|AJ335522.1|HSA335522 Homo sapiens genomic sequence surroundi... 40 5.9
41gb|AY055775.1| Oryza sativa allene oxide synthase (AOS) mRNA, co... 40 5.9
42dbj|AK100012.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.9
43dbj|AK066138.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.9
44dbj|AK061758.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.9
45gb|AF008936.1|AF008936 Homo sapiens syntaxin-16B mRNA, complete cds 40 5.9
46gb|AF008935.1|AF008935 Homo sapiens syntaxin-16A mRNA, complete cds 40 5.9
47gb|AF060813.1|AF060813 Serpulina murdochii strain 56-150 NADH ox... 40 5.9
48gb|AF060805.1|AF060805 Brachyspira innocens strain 4/71 NADH oxi... 40 5.9
49gb|AF060804.1|AF060804 Brachyspira innocens strain B256 NADH oxi... 40 5.9
50gb|AF060803.1|AF060803 Serpulina murdochii strain 155-20 NADH ox... 40 5.9
51gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.9
52gb|AF038897.1|AF038897 Homo sapiens syntaxin 16 mRNA, complete cds 40 5.9
53dbj|AB209296.1| Homo sapiens mRNA for syntaxin 16 isoform a vari... 40 5.9
54emb|AL606927.12| Mouse DNA sequence from clone RP23-144I6 on chr... 40 5.9
55gb|U00428.1|U00428 Linum usitatissimum allene oxide synthase mRN... 40 5.9 
>ref|XM_464670.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1721

 Score =  204 bits (103), Expect = 2e-49
 Identities = 166/187 (88%)
 Strand = Plus / Minus

                                                                        
Query: 222  gtcagcgaagtgaacgtcaccaccggctccagcggcatctccttcacgtcggcggtgaac 281
            |||||||| |||||||||||||||||||||| ||||  ||||  ||||||||||| ||||
Sbjct: 1556 gtcagcgacgtgaacgtcaccaccggctccaccggcgcctccaccacgtcggcggcgaac 1497

                                                                        
Query: 282  gtgtcgtaccgccggaacagctcggccaccattagcctcccaaccgccgtcaccatgtcc 341
            ||||||||||||||||||||||| |||||||| |||| ||| ||||||  ||||||||||
Sbjct: 1496 gtgtcgtaccgccggaacagctccgccaccatcagccgccccaccgccaccaccatgtcc 1437

                                                                        
Query: 342  ttccctgggcactgcttgttcccctccgccggctcgctgttctcaggcccgttcgaccac 401
            ||||| ||||||||||||||||||||||  ||| | ||  |||| |||||||||||||||
Sbjct: 1436 ttcccggggcactgcttgttcccctccgatggcgccctcgtctccggcccgttcgaccac 1377

                   
Query: 402  accacgt 408
            |||||||
Sbjct: 1376 accacgt 1370
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  204 bits (103), Expect = 2e-49
 Identities = 166/187 (88%)
 Strand = Plus / Minus

                                                                           
Query: 222     gtcagcgaagtgaacgtcaccaccggctccagcggcatctccttcacgtcggcggtgaac 281
               |||||||| |||||||||||||||||||||| ||||  ||||  ||||||||||| ||||
Sbjct: 6629038 gtcagcgacgtgaacgtcaccaccggctccaccggcgcctccaccacgtcggcggcgaac 6628979

                                                                           
Query: 282     gtgtcgtaccgccggaacagctcggccaccattagcctcccaaccgccgtcaccatgtcc 341
               ||||||||||||||||||||||| |||||||| |||| ||| ||||||  ||||||||||
Sbjct: 6628978 gtgtcgtaccgccggaacagctccgccaccatcagccgccccaccgccaccaccatgtcc 6628919

                                                                           
Query: 342     ttccctgggcactgcttgttcccctccgccggctcgctgttctcaggcccgttcgaccac 401
               ||||| ||||||||||||||||||||||  ||| | ||  |||| |||||||||||||||
Sbjct: 6628918 ttcccggggcactgcttgttcccctccgatggcgccctcgtctccggcccgttcgaccac 6628859

                      
Query: 402     accacgt 408
               |||||||
Sbjct: 6628858 accacgt 6628852



 Score =  198 bits (100), Expect = 1e-47
 Identities = 166/188 (88%)
 Strand = Plus / Minus

                                                                           
Query: 221     ggtcagcgaagtgaacgtcaccaccggctccagcggcatctccttcacgtcggcggtgaa 280
               ||||||||| |||||||| ||||||||||| ||||||| ||||| ||||||||||| |||
Sbjct: 6638635 ggtcagcgacgtgaacgtgaccaccggctcaagcggcagctcctccacgtcggcggcgaa 6638576

                                                                           
Query: 281     cgtgtcgtaccgccggaacagctcggccaccattagcctcccaaccgccgtcaccatgtc 340
               |||||||||||||||||||||| | |||||||| |||| ||| ||||||  |||||||||
Sbjct: 6638575 cgtgtcgtaccgccggaacagccccgccaccatcagccgccccaccgccaccaccatgtc 6638516

                                                                           
Query: 341     cttccctgggcactgcttgttcccctccgccggctcgctgttctcaggcccgttcgacca 400
               |||||| ||||||||||||||||||||||  |||   | | |||| ||||||||||||||
Sbjct: 6638515 cttcccggggcactgcttgttcccctccgatggcgtcccggtctccggcccgttcgacca 6638456

                       
Query: 401     caccacgt 408
               ||||||||
Sbjct: 6638455 caccacgt 6638448



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 284    gtcgtaccgccggaacagctcggc 307
              ||||||||||||||| ||||||||
Sbjct: 556035 gtcgtaccgccggaaaagctcggc 556012
to top
>dbj|AP004996.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0027A02
          Length = 140402

 Score =  204 bits (103), Expect = 2e-49
 Identities = 166/187 (88%)
 Strand = Plus / Minus

                                                                         
Query: 222   gtcagcgaagtgaacgtcaccaccggctccagcggcatctccttcacgtcggcggtgaac 281
             |||||||| |||||||||||||||||||||| ||||  ||||  ||||||||||| ||||
Sbjct: 63413 gtcagcgacgtgaacgtcaccaccggctccaccggcgcctccaccacgtcggcggcgaac 63354

                                                                         
Query: 282   gtgtcgtaccgccggaacagctcggccaccattagcctcccaaccgccgtcaccatgtcc 341
             ||||||||||||||||||||||| |||||||| |||| ||| ||||||  ||||||||||
Sbjct: 63353 gtgtcgtaccgccggaacagctccgccaccatcagccgccccaccgccaccaccatgtcc 63294

                                                                         
Query: 342   ttccctgggcactgcttgttcccctccgccggctcgctgttctcaggcccgttcgaccac 401
             ||||| ||||||||||||||||||||||  ||| | ||  |||| |||||||||||||||
Sbjct: 63293 ttcccggggcactgcttgttcccctccgatggcgccctcgtctccggcccgttcgaccac 63234

                    
Query: 402   accacgt 408
             |||||||
Sbjct: 63233 accacgt 63227



 Score =  198 bits (100), Expect = 1e-47
 Identities = 166/188 (88%)
 Strand = Plus / Minus

                                                                         
Query: 221   ggtcagcgaagtgaacgtcaccaccggctccagcggcatctccttcacgtcggcggtgaa 280
             ||||||||| |||||||| ||||||||||| ||||||| ||||| ||||||||||| |||
Sbjct: 73010 ggtcagcgacgtgaacgtgaccaccggctcaagcggcagctcctccacgtcggcggcgaa 72951

                                                                         
Query: 281   cgtgtcgtaccgccggaacagctcggccaccattagcctcccaaccgccgtcaccatgtc 340
             |||||||||||||||||||||| | |||||||| |||| ||| ||||||  |||||||||
Sbjct: 72950 cgtgtcgtaccgccggaacagccccgccaccatcagccgccccaccgccaccaccatgtc 72891

                                                                         
Query: 341   cttccctgggcactgcttgttcccctccgccggctcgctgttctcaggcccgttcgacca 400
             |||||| ||||||||||||||||||||||  |||   | | |||| ||||||||||||||
Sbjct: 72890 cttcccggggcactgcttgttcccctccgatggcgtcccggtctccggcccgttcgacca 72831

                     
Query: 401   caccacgt 408
             ||||||||
Sbjct: 72830 caccacgt 72823
to top
>dbj|AK107161.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-F02, full
            insert sequence
          Length = 1721

 Score =  204 bits (103), Expect = 2e-49
 Identities = 166/187 (88%)
 Strand = Plus / Minus

                                                                        
Query: 222  gtcagcgaagtgaacgtcaccaccggctccagcggcatctccttcacgtcggcggtgaac 281
            |||||||| |||||||||||||||||||||| ||||  ||||  ||||||||||| ||||
Sbjct: 1556 gtcagcgacgtgaacgtcaccaccggctccaccggcgcctccaccacgtcggcggcgaac 1497

                                                                        
Query: 282  gtgtcgtaccgccggaacagctcggccaccattagcctcccaaccgccgtcaccatgtcc 341
            ||||||||||||||||||||||| |||||||| |||| ||| ||||||  ||||||||||
Sbjct: 1496 gtgtcgtaccgccggaacagctccgccaccatcagccgccccaccgccaccaccatgtcc 1437

                                                                        
Query: 342  ttccctgggcactgcttgttcccctccgccggctcgctgttctcaggcccgttcgaccac 401
            ||||| ||||||||||||||||||||||  ||| | ||  |||| |||||||||||||||
Sbjct: 1436 ttcccggggcactgcttgttcccctccgatggcgccctcgtctccggcccgttcgaccac 1377

                   
Query: 402  accacgt 408
            |||||||
Sbjct: 1376 accacgt 1370
to top
>ref|XM_464672.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1856

 Score =  198 bits (100), Expect = 1e-47
 Identities = 166/188 (88%)
 Strand = Plus / Minus

                                                                        
Query: 221  ggtcagcgaagtgaacgtcaccaccggctccagcggcatctccttcacgtcggcggtgaa 280
            ||||||||| |||||||| ||||||||||| ||||||| ||||| ||||||||||| |||
Sbjct: 1563 ggtcagcgacgtgaacgtgaccaccggctcaagcggcagctcctccacgtcggcggcgaa 1504

                                                                        
Query: 281  cgtgtcgtaccgccggaacagctcggccaccattagcctcccaaccgccgtcaccatgtc 340
            |||||||||||||||||||||| | |||||||| |||| ||| ||||||  |||||||||
Sbjct: 1503 cgtgtcgtaccgccggaacagccccgccaccatcagccgccccaccgccaccaccatgtc 1444

                                                                        
Query: 341  cttccctgggcactgcttgttcccctccgccggctcgctgttctcaggcccgttcgacca 400
            |||||| ||||||||||||||||||||||  |||   | | |||| ||||||||||||||
Sbjct: 1443 cttcccggggcactgcttgttcccctccgatggcgtcccggtctccggcccgttcgacca 1384

                    
Query: 401  caccacgt 408
            ||||||||
Sbjct: 1383 caccacgt 1376
to top
>dbj|AK105964.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-E05, full
            insert sequence
          Length = 1856

 Score =  198 bits (100), Expect = 1e-47
 Identities = 166/188 (88%)
 Strand = Plus / Minus

                                                                        
Query: 221  ggtcagcgaagtgaacgtcaccaccggctccagcggcatctccttcacgtcggcggtgaa 280
            ||||||||| |||||||| ||||||||||| ||||||| ||||| ||||||||||| |||
Sbjct: 1563 ggtcagcgacgtgaacgtgaccaccggctcaagcggcagctcctccacgtcggcggcgaa 1504

                                                                        
Query: 281  cgtgtcgtaccgccggaacagctcggccaccattagcctcccaaccgccgtcaccatgtc 340
            |||||||||||||||||||||| | |||||||| |||| ||| ||||||  |||||||||
Sbjct: 1503 cgtgtcgtaccgccggaacagccccgccaccatcagccgccccaccgccaccaccatgtc 1444

                                                                        
Query: 341  cttccctgggcactgcttgttcccctccgccggctcgctgttctcaggcccgttcgacca 400
            |||||| ||||||||||||||||||||||  |||   | | |||| ||||||||||||||
Sbjct: 1443 cttcccggggcactgcttgttcccctccgatggcgtcccggtctccggcccgttcgacca 1384

                    
Query: 401  caccacgt 408
            ||||||||
Sbjct: 1383 caccacgt 1376
to top
>gb|BT009396.1| Triticum aestivum clone wlm96.pk039.g16:fis, full insert mRNA
            sequence
          Length = 1870

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 267  acgtcggcggtgaacgtgtcgtaccgccggaacagctc 304
            |||||||||||||| |||||||||||  ||||||||||
Sbjct: 1479 acgtcggcggtgaaggtgtcgtaccggaggaacagctc 1442
to top
>emb|AJ318870.1|HVU318870 Hordeum vulgare mRNA for fatty acid hydroperoxide lyase (13-hpl gene)
          Length = 1673

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 350  gcactgcttgttcccctccgccggctcgctgttctcaggcccgttcgacca 400
            ||||||||||||||||  ||||||||| | | |||| |||||||| |||||
Sbjct: 1368 gcactgcttgttccccagcgccggctccccggtctccggcccgttggacca 1318
to top
>gb|AY540745.1| Zea mays hydroperoxide lyase (HPL) mRNA, complete cds
          Length = 1652

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 284  gtcgtaccgccggaacagctcggcca 309
            |||||| |||||||||||||||||||
Sbjct: 1487 gtcgtagcgccggaacagctcggcca 1462
to top
>gb|AY196004.1| Triticum aestivum allene oxide synthase (TaAOS) mRNA, complete cds
          Length = 1779

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 267  acgtcggcggtgaacgtgtcgtaccg 292
            |||||||||||||| |||||||||||
Sbjct: 1411 acgtcggcggtgaaggtgtcgtaccg 1386
to top
>gb|AY104568.1| Zea mays PCO137115 mRNA sequence
          Length = 1938

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 284  gtcgtaccgccggaacagctcggcca 309
            |||||| |||||||||||||||||||
Sbjct: 1487 gtcgtagcgccggaacagctcggcca 1462
to top
>gb|AY325570.1| Uncultured bacterium clone GG12 putative dissimilatory
           membrane-bound nitrate reductase (narG) gene, partial
           cds
          Length = 641

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 268 cgtcggcggtgaacgtgtcgtaccg 292
           |||||||| ||||||||||||||||
Sbjct: 151 cgtcggcgctgaacgtgtcgtaccg 127
to top
>gb|AC092351.3| Homo sapiens chromosome 16 clone RP11-2L4, complete sequence
          Length = 158216

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 203   tagtcactcggccctggtggt 223
             |||||||||||||||||||||
Sbjct: 58925 tagtcactcggccctggtggt 58905
to top
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 235     acgtcaccaccggctccagcggcat 259
               |||||||||||||| ||||||||||
Sbjct: 1590144 acgtcaccaccggcgccagcggcat 1590120
to top
>gb|BC073876.1| Homo sapiens syntaxin 16, mRNA (cDNA clone MGC:90328
           IMAGE:4371823), complete cds
          Length = 2484

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 401 caccacgttcccgagcagccgccc 424
           |||||||||||| |||||||||||
Sbjct: 539 caccacgttcccaagcagccgccc 516
to top
>ref|XM_514749.1| PREDICTED: Pan troglodytes LOC458368 (LOC458368), mRNA
          Length = 4302

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 401  caccacgttcccgagcagccgccc 424
            |||||||||||| |||||||||||
Sbjct: 3336 caccacgttcccaagcagccgccc 3313
to top
>ref|NM_187610.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1437

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 270  tcggcggtgaacgtgtcgtaccgccggaacagctcg 305
            ||||||||||| |||||||||||  |||| ||||||
Sbjct: 1367 tcggcggtgaaggtgtcgtaccggaggaagagctcg 1332
to top
>ref|XM_463821.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1742

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 284  gtcgtaccgccggaacagctcggc 307
            ||||||||||||||| ||||||||
Sbjct: 1457 gtcgtaccgccggaaaagctcggc 1434
to top
>gb|BC019042.2| Homo sapiens syntaxin 16, transcript variant 2, mRNA (cDNA clone
           MGC:20765 IMAGE:4585425), complete cds
          Length = 2548

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 401 caccacgttcccgagcagccgccc 424
           |||||||||||| |||||||||||
Sbjct: 632 caccacgttcccaagcagccgccc 609
to top
>gb|AC128643.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0007B15 map S10318, complete sequence
          Length = 125243

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 325   ccgccgtcaccatgtccttc 344
             ||||||||||||||||||||
Sbjct: 31949 ccgccgtcaccatgtccttc 31930
to top
>ref|NM_003763.3| Homo sapiens syntaxin 16 (STX16), transcript variant 2, mRNA
          Length = 4896

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 401  caccacgttcccgagcagccgccc 424
            |||||||||||| |||||||||||
Sbjct: 1158 caccacgttcccaagcagccgccc 1135
to top
>ref|NM_001001433.1| Homo sapiens syntaxin 16 (STX16), transcript variant 1, mRNA
          Length = 4959

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 401  caccacgttcccgagcagccgccc 424
            |||||||||||| |||||||||||
Sbjct: 1221 caccacgttcccaagcagccgccc 1198
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                   
Query: 270     tcggcggtgaacgtgtcgtaccgccggaacagctcg 305
               ||||||||||| |||||||||||  |||| ||||||
Sbjct: 6578486 tcggcggtgaaggtgtcgtaccggaggaagagctcg 6578451
to top
>gb|AY062258.1| Oryza sativa (japonica cultivar-group) dev-stage seedling allene
            oxide synthase (AOS) gene, complete cds
          Length = 2465

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 270  tcggcggtgaacgtgtcgtaccgccggaacagctcg 305
            ||||||||||| |||||||||||  |||| ||||||
Sbjct: 1762 tcggcggtgaaggtgtcgtaccggaggaagagctcg 1727
to top
>gb|AC107226.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0081P02,
              complete sequence
          Length = 162425

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                  
Query: 270    tcggcggtgaacgtgtcgtaccgccggaacagctcg 305
              ||||||||||| |||||||||||  |||| ||||||
Sbjct: 121248 tcggcggtgaaggtgtcgtaccggaggaagagctcg 121213
to top
>gb|AC093709.2| Pan troglodytes clone RP43-180A19, complete sequence
          Length = 195646

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 384    tcaggcccgttcgaccacac 403
              ||||||||||||||||||||
Sbjct: 145664 tcaggcccgttcgaccacac 145645
to top
>gb|AY340220.1| Oryza sativa (japonica cultivar-group) hydroperoxide lyase (HPL1)
            gene, complete cds
          Length = 1731

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 284  gtcgtaccgccggaacagctcggc 307
            ||||||||||||||| ||||||||
Sbjct: 1470 gtcgtaccgccggaaaagctcggc 1447
to top
>emb|AL139349.36| Human DNA sequence from clone RP11-261P9 on chromosome 20 Contains
            the 3' end of the STX16 gene for syntaxin 16, the NPEPL1
            gene for aminopeptidase-like 1 and one CpG island,
            complete sequence
          Length = 68743

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 401  caccacgttcccgagcagccgccc 424
            |||||||||||| |||||||||||
Sbjct: 4658 caccacgttcccaagcagccgccc 4635
to top
>gb|AC094014.3| Papio anubis clone RP41-371B12, complete sequence
          Length = 161946

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 384   tcaggcccgttcgaccacac 403
             ||||||||||||||||||||
Sbjct: 90213 tcaggcccgttcgaccacac 90194
to top
>gb|AY310358.1| Oryza sativa (japonica cultivar-group) allene oxide synthase mRNA,
            complete cds
          Length = 1775

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 270  tcggcggtgaacgtgtcgtaccgccggaacagctcg 305
            ||||||||||| |||||||||||  |||| ||||||
Sbjct: 1484 tcggcggtgaaggtgtcgtaccggaggaagagctcg 1449
to top
>emb|CR857623.1| Pongo pygmaeus mRNA; cDNA DKFZp459J1550 (from clone DKFZp459J1550)
          Length = 4073

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 401  caccacgttcccgagcagccgccc 424
            |||||||||||| |||||||||||
Sbjct: 1210 caccacgttcccaagcagccgccc 1187
to top
>gb|AC004491.2| Homo sapiens BAC clone CTB-139P11 from 7q11-q21, complete sequence
          Length = 175839

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 384   tcaggcccgttcgaccacac 403
             ||||||||||||||||||||
Sbjct: 22498 tcaggcccgttcgaccacac 22517
to top
>gb|AF428146.1|AF428146 Homo sapiens syntaxin-16D mRNA, complete cds
          Length = 760

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 401 caccacgttcccgagcagccgccc 424
           |||||||||||| |||||||||||
Sbjct: 435 caccacgttcccaagcagccgccc 412
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 325     ccgccgtcaccatgtccttc 344
               ||||||||||||||||||||
Sbjct: 3437994 ccgccgtcaccatgtccttc 3437975
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                   
Query: 270     tcggcggtgaacgtgtcgtaccgccggaacagctcg 305
               ||||||||||| |||||||||||  |||| ||||||
Sbjct: 6577699 tcggcggtgaaggtgtcgtaccggaggaagagctcg 6577664
to top
>gb|AC018764.8| Homo sapiens chromosome 5 clone CTD-2327L5, complete sequence
          Length = 126052

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 340   ccttccctgggcactgcttg 359
             ||||||||||||||||||||
Sbjct: 19810 ccttccctgggcactgcttg 19791
to top
>dbj|AP004752.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0501G04
          Length = 156603

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 284   gtcgtaccgccggaacagctcggc 307
             ||||||||||||||| ||||||||
Sbjct: 34088 gtcgtaccgccggaaaagctcggc 34065
to top
>dbj|AK026970.1| Homo sapiens cDNA: FLJ23317 fis, clone HEP12062, highly similar to
           AF008936 Homo sapiens syntaxin-16B mRNA
          Length = 3227

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 401 caccacgttcccgagcagccgccc 424
           |||||||||||| |||||||||||
Sbjct: 371 caccacgttcccaagcagccgccc 348
to top
>dbj|AK105694.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C08, full
            insert sequence
          Length = 1742

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 284  gtcgtaccgccggaacagctcggc 307
            ||||||||||||||| ||||||||
Sbjct: 1457 gtcgtaccgccggaaaagctcggc 1434
to top
>emb|AJ335522.1|HSA335522 Homo sapiens genomic sequence surrounding NotI site, clone
           NL4-BM21RS
          Length = 746

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 123 gtctactatagcaattatta 142
           ||||||||||||||||||||
Sbjct: 606 gtctactatagcaattatta 587
to top
>gb|AY055775.1| Oryza sativa allene oxide synthase (AOS) mRNA, complete cds
          Length = 1809

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 270  tcggcggtgaacgtgtcgtaccgccggaacagctcg 305
            ||||||||||| |||||||||||  |||| ||||||
Sbjct: 1493 tcggcggtgaaggtgtcgtaccggaggaagagctcg 1458
to top
>dbj|AK100012.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013140G07, full
            insert sequence
          Length = 1646

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 284  gtcgtaccgccggaacagctcggc 307
            ||||||||||||||| ||||||||
Sbjct: 1400 gtcgtaccgccggaaaagctcggc 1377
to top
>dbj|AK066138.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052K11, full
            insert sequence
          Length = 1974

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 270  tcggcggtgaacgtgtcgtaccgccggaacagctcg 305
            ||||||||||| |||||||||||  |||| ||||||
Sbjct: 1630 tcggcggtgaaggtgtcgtaccggaggaagagctcg 1595
to top
>dbj|AK061758.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-A10, full
            insert sequence
          Length = 1843

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 270  tcggcggtgaacgtgtcgtaccgccggaacagctcg 305
            ||||||||||| |||||||||||  |||| ||||||
Sbjct: 1507 tcggcggtgaaggtgtcgtaccggaggaagagctcg 1472
to top
>gb|AF008936.1|AF008936 Homo sapiens syntaxin-16B mRNA, complete cds
          Length = 1152

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 401 caccacgttcccgagcagccgccc 424
           |||||||||||| |||||||||||
Sbjct: 625 caccacgttcccaagcagccgccc 602
to top
>gb|AF008935.1|AF008935 Homo sapiens syntaxin-16A mRNA, complete cds
          Length = 1089

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 401 caccacgttcccgagcagccgccc 424
           |||||||||||| |||||||||||
Sbjct: 562 caccacgttcccaagcagccgccc 539
to top
>gb|AF060813.1|AF060813 Serpulina murdochii strain 56-150 NADH oxidase gene, partial cds
          Length = 1273

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 113 cagtagcacagtctactatagcaa 136
           |||||||||||||| |||||||||
Sbjct: 854 cagtagcacagtctcctatagcaa 831
to top
>gb|AF060805.1|AF060805 Brachyspira innocens strain 4/71 NADH oxidase gene, partial cds
          Length = 1252

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 113 cagtagcacagtctactatagcaa 136
           |||||||||||||| |||||||||
Sbjct: 855 cagtagcacagtctcctatagcaa 832
to top
>gb|AF060804.1|AF060804 Brachyspira innocens strain B256 NADH oxidase gene, partial cds
          Length = 1239

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 113 cagtagcacagtctactatagcaa 136
           |||||||||||||| |||||||||
Sbjct: 841 cagtagcacagtctcctatagcaa 818
to top
>gb|AF060803.1|AF060803 Serpulina murdochii strain 155-20 NADH oxidase gene, partial cds
          Length = 1265

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 113 cagtagcacagtctactatagcaa 136
           |||||||||||||| |||||||||
Sbjct: 845 cagtagcacagtctcctatagcaa 822
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 325     ccgccgtcaccatgtccttc 344
               ||||||||||||||||||||
Sbjct: 3446698 ccgccgtcaccatgtccttc 3446679
to top
>gb|AF038897.1|AF038897 Homo sapiens syntaxin 16 mRNA, complete cds
          Length = 924

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 401 caccacgttcccgagcagccgccc 424
           |||||||||||| |||||||||||
Sbjct: 434 caccacgttcccaagcagccgccc 411
to top
>dbj|AB209296.1| Homo sapiens mRNA for syntaxin 16 isoform a variant protein
          Length = 3433

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 401  caccacgttcccgagcagccgccc 424
            |||||||||||| |||||||||||
Sbjct: 1059 caccacgttcccaagcagccgccc 1036
to top
>emb|AL606927.12| Mouse DNA sequence from clone RP23-144I6 on chromosome 4, complete
            sequence
          Length = 212373

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 162  acttggcagttgcactatag 181
            ||||||||||||||||||||
Sbjct: 3968 acttggcagttgcactatag 3949
to top
>gb|U00428.1|U00428 Linum usitatissimum allene oxide synthase mRNA complete cds
          Length = 2038

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 339  tccttccctgggcactgcttgttc 362
            |||||||||| |||||||||||||
Sbjct: 1726 tccttccctgcgcactgcttgttc 1703


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,003,919
Number of Sequences: 3902068
Number of extensions: 3003919
Number of successful extensions: 55445
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55088
Number of HSP's gapped (non-prelim): 353
length of query: 441
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 419
effective length of database: 17,147,199,772
effective search space: 7184676704468
effective search space used: 7184676704468
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top