>APBE_TREPA (O83774) Thiamine biosynthesis lipoprotein apbE precursor|
          Length = 362

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +3

Query: 222 WNCGV*VCALPGLSSCGGSLRKAE 293
           W  GV VC L G+ SCGG  R  E
Sbjct: 8   WRIGVLVCILCGVGSCGGRARVRE 31

>MOSA_MAIZE (P15268) Autonomous transposable element EN-1 mosaic protein|
           (Suppressor-mutator system protein) (SPM)
          Length = 621

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 14/28 (50%), Positives = 14/28 (50%)
 Frame = +3

Query: 375 PSGLFSIGRPGEPKGEVAWSPPSWSGAG 458
           PS  F   R  EPKG  AW   SW G G
Sbjct: 131 PSKPFDQRRVIEPKGTRAWKEVSWDGTG 158

>THBI_RHOPR (Q06684) Thrombin inhibitor rhodniin|
          Length = 103

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -1

Query: 147 PYCLHRVDVSCESFARKYTPPCNLNC 70
           P+ LHRV   C S    Y+ PC LNC
Sbjct: 9   PHALHRV---CGSDGETYSNPCTLNC 31

>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor|
          Length = 1453

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = -3

Query: 466 RGKPAPDQDGGDHATSPFGSPGRPIEKSPLG 374
           RG P P    GD   +  G PGRP E+ P G
Sbjct: 209 RGPPGPPGKNGDDGEA--GKPGRPGERGPPG 237

>CO1A1_HUMAN (P02452) Collagen alpha-1(I) chain precursor|
          Length = 1464

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = -3

Query: 466 RGKPAPDQDGGDHATSPFGSPGRPIEKSPLG 374
           RG P P    GD   +  G PGRP E+ P G
Sbjct: 220 RGPPGPPGKNGDDGEA--GKPGRPGERGPPG 248

>CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor|
          Length = 1460

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = -3

Query: 466 RGKPAPDQDGGDHATSPFGSPGRPIEKSPLG 374
           RG P P    GD   +  G PGRP E+ P G
Sbjct: 216 RGPPGPPGKNGDDGEA--GKPGRPGERGPPG 244

>CO1A1_BOVIN (P02453) Collagen alpha-1(I) chain (Fragments)|
          Length = 779

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = -3

Query: 466 RGKPAPDQDGGDHATSPFGSPGRPIEKSPLG 374
           RG P P    GD   +  G PGRP E+ P G
Sbjct: 58  RGPPGPPGKNGDDGEA--GKPGRPGERGPPG 86

>AGOG_PYRKO (Q5JI79) N-glycosylase/DNA lyase (AGOG) (8-oxoguanine DNA|
           glycosylase) (EC 3.2.2.-) (DNA-(apurinic or apyrimidinic
           site) lyase) (EC 4.2.99.18) (AP lyase)
          Length = 263

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 328 AGKGRDWWTRSNSAFLNEPPQE 263
           +GKG DWW   +  F   PP++
Sbjct: 75  SGKGEDWWWEFSKYFSQNPPEK 96


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,151,397
Number of Sequences: 219361
Number of extensions: 1061061
Number of successful extensions: 3056
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3055
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3188886965
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)