Clone Name | rbart27b01 |
---|---|
Clone Library Name | barley_pub |
>gb|AC129337.4| Mus musculus BAC clone RP23-123I14 from 1, complete sequence Length = 184705 Score = 42.1 bits (21), Expect = 0.78 Identities = 21/21 (100%) Strand = Plus / Plus Query: 85 tatatgctgggtcttgaggta 105 ||||||||||||||||||||| Sbjct: 94479 tatatgctgggtcttgaggta 94499
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 42.1 bits (21), Expect = 0.78 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 gtaagtgctacaggggatgat 138 ||||||||||||||||||||| Sbjct: 1984028 gtaagtgctacaggggatgat 1984008
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 0.78 Identities = 24/25 (96%) Strand = Plus / Plus Query: 63 atgatatgggcttcagaatatatat 87 ||||||||| ||||||||||||||| Sbjct: 18690520 atgatatggtcttcagaatatatat 18690544
>dbj|AP005177.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0055I24 Length = 155872 Score = 42.1 bits (21), Expect = 0.78 Identities = 24/25 (96%) Strand = Plus / Plus Query: 63 atgatatgggcttcagaatatatat 87 ||||||||| ||||||||||||||| Sbjct: 22808 atgatatggtcttcagaatatatat 22832
>gb|AC101783.12| Mus musculus chromosome 1, clone RP24-136B19, complete sequence Length = 169909 Score = 42.1 bits (21), Expect = 0.78 Identities = 21/21 (100%) Strand = Plus / Plus Query: 85 tatatgctgggtcttgaggta 105 ||||||||||||||||||||| Sbjct: 44915 tatatgctgggtcttgaggta 44935
>gb|AC141328.4| Mus musculus BAC clone RP23-204P22 from 6, complete sequence Length = 194430 Score = 42.1 bits (21), Expect = 0.78 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 tatatgctgggtcttgaggta 105 ||||||||||||||||||||| Sbjct: 83509 tatatgctgggtcttgaggta 83489
>ref|XM_841423.1| Trypanosoma brucei TREU927 phospholipase A1 (Tb927.1.4830) partial mRNA Length = 903 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 ataacataattaattacctc 49 |||||||||||||||||||| Sbjct: 530 ataacataattaattacctc 511
>gb|AC157572.4| Mus musculus BAC clone RP23-79O10 from chromosome 14, complete sequence Length = 242759 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 ctccctggggctggggatta 202 |||||||||||||||||||| Sbjct: 86975 ctccctggggctggggatta 86994
>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29 Length = 311000 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 cggccgacctgctcggggag 236 |||||||||||||||||||| Sbjct: 231411 cggccgacctgctcggggag 231392
>gb|AC159323.3| Mus musculus BAC clone RP23-6I8 from chromosome 14, complete sequence Length = 223640 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 ctccctggggctggggatta 202 |||||||||||||||||||| Sbjct: 51221 ctccctggggctggggatta 51202
>emb|AJ716154.1| Trypanosoma brucei PLA1 gene for phospholipase A1, strain 427 Length = 903 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 ataacataattaattacctc 49 |||||||||||||||||||| Sbjct: 530 ataacataattaattacctc 511
>gb|U15756.1|TBU15756 Trypanosoma brucei cDNA clone SL-1A-3 Length = 515 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 ataacataattaattacctc 49 |||||||||||||||||||| Sbjct: 384 ataacataattaattacctc 403 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,655,839 Number of Sequences: 3902068 Number of extensions: 2655839 Number of successful extensions: 44484 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 44449 Number of HSP's gapped (non-prelim): 35 length of query: 239 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 217 effective length of database: 17,147,199,772 effective search space: 3720942350524 effective search space used: 3720942350524 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)