>gb|BT018442.1| Zea mays clone EL01N0401E11.d mRNA sequence
          Length = 1397

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 65/73 (89%)
 Strand = Plus / Minus

                                                                       
Query: 461 gcagtctggacaaaatcaaatgtcttagcccctctagcattcaacttgctcctaacccac 520
           |||||||| ||||||||||| | |||||| ||||||| ||||||||||||||| ||||| 
Sbjct: 865 gcagtctgaacaaaatcaaaaggcttagctcctctagtattcaacttgctcctgacccat 806

                        
Query: 521 tgccggtcatctt 533
           |||||||| ||||
Sbjct: 805 tgccggtcttctt 793



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                       
Query: 341 ttagacgagtccagcagatatgggagttctaacaactggagaaacgattccgtttgtggg 400
           ||||| ||||||||||||||||||||||| |  | ||| ||||| || || |||||||| 
Sbjct: 985 ttagatgagtccagcagatatgggagttccagaagctgaagaaaagactcagtttgtgga 926

                   
Query: 401 ttcctgca 408
           ||||||||
Sbjct: 925 ttcctgca 918

>gb|AC135228.5| Oryza sativa chromosome 3 BAC OSJNBb0122C16 genomic sequence, complete
             sequence
          Length = 129440

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 76/88 (86%)
 Strand = Plus / Minus

                                                                         
Query: 446   ggatcataaggtggagcagtctggacaaaatcaaatgtcttagcccctctagcattcaac 505
             |||||||||| || ||||||||||||||||||||  |  ||||||||||| ||||| |||
Sbjct: 21929 ggatcataagatgcagcagtctggacaaaatcaataggtttagcccctctggcatttaac 21870

                                         
Query: 506   ttgctcctaacccactgccggtcatctt 533
             ||| |||||||||| |||  ||||||||
Sbjct: 21869 ttgttcctaacccattgcaagtcatctt 21842

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 76/88 (86%)
 Strand = Plus / Minus

                                                                            
Query: 446      ggatcataaggtggagcagtctggacaaaatcaaatgtcttagcccctctagcattcaac 505
                |||||||||| || ||||||||||||||||||||  |  ||||||||||| ||||| |||
Sbjct: 29190068 ggatcataagatgcagcagtctggacaaaatcaataggtttagcccctctggcatttaac 29190009

                                            
Query: 506      ttgctcctaacccactgccggtcatctt 533
                ||| |||||||||| |||  ||||||||
Sbjct: 29190008 ttgttcctaacccattgcaagtcatctt 29189981

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 76/88 (86%)
 Strand = Plus / Minus

                                                                            
Query: 446      ggatcataaggtggagcagtctggacaaaatcaaatgtcttagcccctctagcattcaac 505
                |||||||||| || ||||||||||||||||||||  |  ||||||||||| ||||| |||
Sbjct: 29281490 ggatcataagatgcagcagtctggacaaaatcaataggtttagcccctctggcatttaac 29281431

                                            
Query: 506      ttgctcctaacccactgccggtcatctt 533
                ||| |||||||||| |||  ||||||||
Sbjct: 29281430 ttgttcctaacccattgcaagtcatctt 29281403

>dbj|AK073636.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050L15, full
            insert sequence
          Length = 1551

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 76/88 (86%)
 Strand = Plus / Minus

                                                                        
Query: 446  ggatcataaggtggagcagtctggacaaaatcaaatgtcttagcccctctagcattcaac 505
            |||||||||| || ||||||||||||||||||||  |  ||||||||||| ||||| |||
Sbjct: 1167 ggatcataagatgcagcagtctggacaaaatcaataggtttagcccctctggcatttaac 1108

                                        
Query: 506  ttgctcctaacccactgccggtcatctt 533
            ||| |||||||||| |||  ||||||||
Sbjct: 1107 ttgttcctaacccattgcaagtcatctt 1080

>dbj|AK063969.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-B02, full
            insert sequence
          Length = 1558

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 76/88 (86%)
 Strand = Plus / Minus

                                                                        
Query: 446  ggatcataaggtggagcagtctggacaaaatcaaatgtcttagcccctctagcattcaac 505
            |||||||||| || ||||||||||||||||||||  |  ||||||||||| ||||| |||
Sbjct: 1054 ggatcataagatgcagcagtctggacaaaatcaataggtttagcccctctggcatttaac 995

                                        
Query: 506  ttgctcctaacccactgccggtcatctt 533
            ||| |||||||||| |||  ||||||||
Sbjct: 994  ttgttcctaacccattgcaagtcatctt 967

>ref|XM_460436.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F01936g)
           partial mRNA
          Length = 2181

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 234 cctcatcaccttcgtcatcttcaacttcatc 264
           |||||||||||| |||||||||| |||||||
Sbjct: 751 cctcatcaccttggtcatcttcatcttcatc 721

>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces
              hansenii
          Length = 2336804

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 234    cctcatcaccttcgtcatcttcaacttcatc 264
              |||||||||||| |||||||||| |||||||
Sbjct: 149719 cctcatcaccttggtcatcttcatcttcatc 149749

>emb|AL161503.2|ATCHRIV15 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 15
          Length = 199987

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 527    tcatcttcaatatcaagttct 547
              |||||||||||||||||||||
Sbjct: 162116 tcatcttcaatatcaagttct 162096

>gb|AC010060.10| Drosophila melanogaster 3L BAC RP98-22J22 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 200985

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 103   ttgcagtaatgctctacagag 123
             |||||||||||||||||||||
Sbjct: 88866 ttgcagtaatgctctacagag 88846

>gb|AE014133.1| Streptococcus mutans UA159, complete genome
          Length = 2030921

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 532  ttcaatatcaagttcttcatt 552
            |||||||||||||||||||||
Sbjct: 2661 ttcaatatcaagttcttcatt 2641

>gb|AF147263.1|T1J24 Arabidopsis thaliana BAC T1J24
          Length = 122529

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 527   tcatcttcaatatcaagttct 547
             |||||||||||||||||||||
Sbjct: 73753 tcatcttcaatatcaagttct 73773

>gb|AE003533.4| Drosophila melanogaster chromosome 3L, section 52 of 83 of the complete
              sequence
          Length = 289141

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 103    ttgcagtaatgctctacagag 123
              |||||||||||||||||||||
Sbjct: 213422 ttgcagtaatgctctacagag 213402

>ref|XM_636935.1| Dictyostelium discoideum phospholipase D1 (DDB0231508), partial
           mRNA
          Length = 4923

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 236 tcatcaccttcgtcatcttcaacttcat 263
           |||||| |||||||||||||| ||||||
Sbjct: 623 tcatcatcttcgtcatcttcatcttcat 596

>ref|XM_635583.1| Dictyostelium discoideum hypothetical protein (DDB0205580), partial
           mRNA
          Length = 1044

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 237 catcaccttcgtcatcttcaacttcatc 264
           ||||| |||||||||||||| |||||||
Sbjct: 832 catcatcttcgtcatcttcatcttcatc 805

>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 275     atggcgtcgtcgtcaagcgc 294
               ||||||||||||||||||||
Sbjct: 1728439 atggcgtcgtcgtcaagcgc 1728420

>ref|XM_455530.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F09889g predicted mRNA
          Length = 3102

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tcatcaccttcgtcatcttc 255
            ||||||||||||||||||||
Sbjct: 3041 tcatcaccttcgtcatcttc 3022

>ref|XM_380439.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00263.1)
           partial mRNA
          Length = 2538

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 236 tcatcaccttcgtcatcttc 255
           ||||||||||||||||||||
Sbjct: 908 tcatcaccttcgtcatcttc 889

>gb|AC122021.2| Mus musculus BAC clone RP24-366N1 from 3, complete sequence
          Length = 186873

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    agttttccttttgcagtaat 112
             ||||||||||||||||||||
Sbjct: 77600 agttttccttttgcagtaat 77581

>gb|AC126010.13| Medicago truncatula clone mth2-20e4, complete sequence
          Length = 113964

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 236 tcatcaccttcgtcatcttcaacttcat 263
           ||||||||||| ||||||||| ||||||
Sbjct: 992 tcatcaccttcctcatcttcagcttcat 965

>emb|AL162729.8| Human DNA sequence from clone RP11-215O15 on chromosome 9 Contains a
            novel gene and a CpG island, complete sequence
          Length = 48561

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 96   tttccttttgcagtaatgctctacagag 123
            ||||||||||||||| ||||| ||||||
Sbjct: 9485 tttccttttgcagtagtgctcaacagag 9458

>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 2602197

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 236    tcatcaccttcgtcatcttc 255
              ||||||||||||||||||||
Sbjct: 911018 tcatcaccttcgtcatcttc 910999

>emb|BX324134.11| Zebrafish DNA sequence from clone DKEY-103K8 in linkage group 6, complete
              sequence
          Length = 219514

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 95     ttttccttttgcagtaatgc 114
              ||||||||||||||||||||
Sbjct: 175140 ttttccttttgcagtaatgc 175121

>gb|AF465939.1| Branchiostoma floridae paired-like homeodomain transcription factor
            Shox (shox) mRNA, complete cds
          Length = 2115

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 301  tgcctgagagctcgacacat 320
            ||||||||||||||||||||
Sbjct: 1691 tgcctgagagctcgacacat 1710

>gb|AY058130.1| Arabidopsis thaliana At2g24790/F27A10.10 mRNA, complete cds
          Length = 1127

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 272 tctatggcgtcgtcgtcaag 291
           ||||||||||||||||||||
Sbjct: 59  tctatggcgtcgtcgtcaag 78

>emb|BX890609.7| Zebrafish DNA sequence from clone DKEY-56E5, complete sequence
          Length = 228713

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 237    catcaccttcgtcatcttcaacttcatc 264
              ||||| |||| |||||||||||||||||
Sbjct: 151411 catcatcttcttcatcttcaacttcatc 151438

>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 236    tcatcaccttcgtcatcttc 255
              ||||||||||||||||||||
Sbjct: 955576 tcatcaccttcgtcatcttc 955557

>emb|CT573508.2| Medicago truncatula chromosome 5 clone mth2-29p15, COMPLETE SEQUENCE
          Length = 125647

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 236    tcatcaccttcgtcatcttcaacttcat 263
              ||||||||||| ||||||||| ||||||
Sbjct: 108201 tcatcaccttcctcatcttcagcttcat 108228

>gb|BC083774.1| Rattus norvegicus serologically defined colon cancer antigen 10, mRNA
            (cDNA clone MGC:94726 IMAGE:7193421), complete cds
          Length = 1852

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 242  ccttcgtcatcttcaacttc 261
            ||||||||||||||||||||
Sbjct: 1301 ccttcgtcatcttcaacttc 1282

>ref|NM_001013199.1| Rattus norvegicus serologically defined colon cancer antigen 10
            (Sdccag10), mRNA
          Length = 1852

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 242  ccttcgtcatcttcaacttc 261
            ||||||||||||||||||||
Sbjct: 1301 ccttcgtcatcttcaacttc 1282

>emb|CT009749.1| Medicago truncatula chromosome 5 clone mth2-46e3, COMPLETE SEQUENCE
          Length = 138861

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 236    tcatcaccttcgtcatcttcaacttcat 263
              ||||||||||| |||||||| |||||||
Sbjct: 117660 tcatcaccttcctcatcttcgacttcat 117633

>gb|U48701.1|KLU48701 Kluyveromyces lactis CDC68 gene, complete cds
          Length = 4132

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tcatcaccttcgtcatcttc 255
            ||||||||||||||||||||
Sbjct: 3650 tcatcaccttcgtcatcttc 3631


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,305,137
Number of Sequences: 3902068
Number of extensions: 4305137
Number of successful extensions: 74186
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74013
Number of HSP's gapped (non-prelim): 173
length of query: 566
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 543
effective length of database: 17,143,297,704
effective search space: 9308810653272
effective search space used: 9308810653272
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)