>RPA2_NEUCR (O74633) DNA-directed RNA polymerase I polypeptide 2 (EC 2.7.7.6)|
           (RNA polymerase I subunit 2)
          Length = 1234

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 6   NTDPYECTNSSSINMSMCRMKAETLGVPKT 95
           N  P+   N S  NM  C+M  +T+G P T
Sbjct: 705 NMTPFSDFNQSPRNMYQCQMGKQTMGTPAT 734

>RPA2_SCHPO (Q9P7X8) Probable DNA-directed RNA polymerase I polypeptide 2 (EC|
           2.7.7.6) (RNA polymerase I subunit 2)
          Length = 1227

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 6   NTDPYECTNSSSINMSMCRMKAETLGVPKT 95
           N  P+   N S  NM  C+M  +T+G P T
Sbjct: 740 NMTPFSDFNQSPRNMYQCQMGKQTMGTPGT 769

>TRMU_CAUCR (P58074) Probable tRNA|
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           (EC 2.1.1.61)
          Length = 383

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 13/47 (27%), Positives = 25/47 (53%)
 Frame = +3

Query: 60  RMKAETLGVPKTLSVLQHGFPKMIG*GYRD*YLQTPSPLFSIACQET 200
           RM AE +G+P  +   +  F + +   + D YL+  +P+  + C +T
Sbjct: 67  RMAAERIGIPHYVLDYESRFREQVIEDFADAYLRGETPIPCVRCNQT 113


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,640,913
Number of Sequences: 219361
Number of extensions: 631108
Number of successful extensions: 1349
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1349
length of database: 80,573,946
effective HSP length: 56
effective length of database: 68,289,730
effective search space used: 1638953520
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)