ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart27a02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YTRE_LEPBI (P20464) Hypothetical 22 kDa protein in trpE 5'region 29 6.9

>YTRE_LEPBI (P20464) Hypothetical 22 kDa protein in trpE 5'region|
          Length = 189

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 6/51 (11%)
 Frame = +1

Query: 217 YINPSGNVTWNTKEKK*EMAE------HYTSRITHSTGNRLTKVIKRPNQP 351
           ++NPSG+ +WN   +K  + +      H+T  +    G      + +P QP
Sbjct: 135 HLNPSGDRSWNINSQKASICKGCPSSAHFTETLEFHYGKHHQTYVTKPQQP 185


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,170,954
Number of Sequences: 219361
Number of extensions: 1121554
Number of successful extensions: 2202
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2201
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 3970331829
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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