>PNS1_ASPFU (Q4WYG7) Protein pns1|
          Length = 537

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +1

Query: 214 ANTFTNQNQDNNVMRPGRRQQGCLTDYQQQPQVHNNNITLHSFGLGF 354
           A ++ N +Q     +PG +        QQQP  +NNN++ H + L F
Sbjct: 5   AASYYNPSQSYGDFQPGMQNP------QQQPDYYNNNVSNHGYDLNF 45

>INSM_ECOLI (Q47718) Transposase insM for insertion sequence element IS600|
          Length = 198

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +2

Query: 170 SGRMQQVLGHVSCKQPTH 223
           +GR+ + LG VSC+QPTH
Sbjct: 67  AGRLMKELGLVSCQQPTH 84

>NPHP1_CAEEL (O17972) Nephrocystin-1-like protein (Nephronophthisis homolog)|
          Length = 682

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
 Frame = +3

Query: 132 SVDSQMERERV-MAAAGCNRSLAMCLVNSQHIYQPEPGQQCD---EARPTAAGMSDRLST 299
           SVDSQ E E+  MAA G  +S          +Y  +  +  D   E   T   + D L +
Sbjct: 104 SVDSQSEEEKPKMAAIGRRKST---------MYNDDESEDSDNDSEIIETDVQLDDPLPS 154

Query: 300 TTTSPQQQHYTP 335
               PQQQH  P
Sbjct: 155 QPQPPQQQHQQP 166

>DDBX_BOVIN (P52898) Dihydrodiol dehydrogenase 3 (EC 1.-.-.-) (Prostaglandin F|
           synthase)
          Length = 323

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = +3

Query: 207 VNSQHIYQPEPGQQCDEARPTAAGMSDRLSTTTTSPQQQHYTPLLWARLLRPDQIR 374
           ++S H+YQ E  +Q  +A      +  +++  T   +   YT  LW+  LRP+ +R
Sbjct: 49  IDSAHLYQNE--EQVGQA------IRSKIADGTVKREDIFYTSKLWSTSLRPELVR 96

>PPBJ_RAT (P51740) Intestinal alkaline phosphatase 2 precursor (EC 3.1.3.1)|
           (IAP-II)
          Length = 551

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
 Frame = +3

Query: 78  LGKE--IFGRYIHAWILHTFSVDSQMERERVMAAAGCNRSLAMCLVNSQHIYQPEPGQQC 251
           +GK+  IF R   A +LH   V  Q     VMA AGC      C +              
Sbjct: 451 VGKDVAIFARGPQAHLLH--GVQEQNYIAHVMAFAGCLEPYTDCGL----------APPA 498

Query: 252 DEARPTAAGMSDRLSTTTTS 311
           DE RPT    +   +TTTT+
Sbjct: 499 DENRPTTPVQNSTTTTTTTT 518


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,102,577
Number of Sequences: 219361
Number of extensions: 1467137
Number of successful extensions: 3635
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3633
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)