>BCCA_MYCLE (P46392) Acetyl-/propionyl-coenzyme A carboxylase alpha chain|
           [Includes: Biotin carboxylase (EC 6.3.4.14); Biotin
           carboxyl carrier protein (BCCP)]
          Length = 598

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -3

Query: 224 IVSDRYLLGKNSSVTTHMRWLDT 156
           +VSD  L+G N+S + H RW++T
Sbjct: 431 VVSDPALIGDNNSFSVHTRWIET 453

>ENV_HV1ZH (P05881) Envelope polyprotein GP160 precursor [Contains: Exterior|
           membrane glycoprotein (GP120); Transmembrane
           glycoprotein (GP41)]
          Length = 856

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
 Frame = +1

Query: 307 NPTPLALQSGKAQETFDVWRNS---QASEDTMNSW 402
           +P P  L  G   E FD+W+N+   Q  ED ++ W
Sbjct: 77  DPNPQELSLGNVTEKFDMWKNNMVEQMHEDVISLW 111

>ENV_HV1OY (P20888) Envelope polyprotein GP160 precursor [Contains: Exterior|
           membrane glycoprotein (GP120); Transmembrane
           glycoprotein (GP41)]
          Length = 855

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
 Frame = +1

Query: 304 PNPTPLALQSGKAQETFDVWRNS---QASEDTMNSW 402
           PNP  + L  G   E FD+W+N+   Q  ED ++ W
Sbjct: 78  PNPQEVVL--GNVTENFDMWKNNMVEQMQEDIISLW 111

>CSF1_ASHGO (Q74ZX0) Protein CSF1|
          Length = 2887

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -2

Query: 429 THDRTTATIPAVHSVL*SLRVSPYIKRFLRFAALQSKG 316
           T    T ++P+V  V+  L+  P I+RFL    L +KG
Sbjct: 122 TSAEPTVSVPSVEEVIAELQDDPLIRRFLPVEFLHNKG 159

>MUTS_BACLD (Q65JE2) DNA mismatch repair protein mutS|
          Length = 869

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = -1

Query: 328 AKQGAWGLEVSSLRSKDYGQTVALAMCSIHYYSWSLYL 215
           AK+ +  LE++ L S+D G +  + MC + Y+S S Y+
Sbjct: 38  AKKASQELEIT-LTSRDGGSSERIPMCGVPYHSCSSYI 74


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,720,497
Number of Sequences: 219361
Number of extensions: 1588647
Number of successful extensions: 3079
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3079
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3188886965
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)