ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart26g11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_472341.1| Oryza sativa (japonica cultivar-group), predic... 62 2e-06
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
3dbj|AK101501.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
4emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4,... 62 2e-06
5dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 44 0.38
6gb|AF440828.1| Streptomyces avermitilis Imp1 (imp1) gene, partia... 44 0.38
7gb|AC165174.2| Zea mays clone ZMMBBb-127F19, complete sequence 42 1.5
8gb|AC130721.3| Mus musculus BAC clone RP24-333B3 from chromosome... 42 1.5
9gb|AY738621.1| Natronococcus occultus DnaK gene, partial cds 42 1.5
10gb|AC159742.1| Ornithorhynchus anatinus chromosome UNK clone OAB... 42 1.5
11gb|AC149089.4| Mus musculus BAC clone RP23-94H23 from 6, complet... 42 1.5
12ref|XM_463851.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.0
13gb|AY294226.1| Uncultured bacterium cosmid gbiox603r, complete s... 40 6.0
14gb|AF178030.3| Homo sapiens chromosome 8 multiple clones map q23... 40 6.0
15gb|CP000238.1| Baumannia cicadellinicola str. Hc (Homalodisca co... 40 6.0
16gb|AC140193.3| Mus musculus BAC clone RP23-247C12 from chromosom... 40 6.0
17gb|AC113011.9| Mus musculus chromosome 16, clone RP23-173D22, co... 40 6.0
18gb|AC133503.4| Mus musculus BAC clone RP24-301O19 from chromosom... 40 6.0
19gb|AC117225.3| Mus musculus BAC clone RP23-366F3 from 19, comple... 40 6.0
20emb|CR718653.2|CNS0GHGJ Tetraodon nigroviridis full-length cDNA 40 6.0
21gb|AC161500.4| Mus musculus chromosome 7, clone RP23-145H5, comp... 40 6.0
22emb|AL731545.4| Human DNA sequence from clone RP11-431F18 on chr... 40 6.0
23gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 6.0
24gb|AY135339.1| Homo sapiens isolate MRPS35P3 mitochondrial ribos... 40 6.0
25gb|AF161269.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
26emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete ... 40 6.0
27gb|AC006484.2| Homo sapiens chromosome 5, clone hRPK.448_K_10, c... 40 6.0
28gb|AC182541.1| Ateles geoffroyi clone UC1-374M20, complete sequence 40 6.0
29dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 6.0
30gb|AC092228.1|AC092228 Drosophila melanogaster, chromosome 2L, r... 40 6.0
31ref|NG_002895.1| Homo sapiens mitochondrial ribosomal protein S3... 40 6.0
32dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
33dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
34gb|AC010738.5| Homo sapiens BAC clone RP11-443I9 from 2, complet... 40 6.0
35dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
36gb|AC158669.3| Mus musculus 6 BAC RP23-66K6 (Roswell Park Cancer... 40 6.0
37dbj|AP004090.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
38dbj|AK069550.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.0
39dbj|AK062468.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.0
40gb|AF119222.1|AF119222 Oryza sativa BAC clone 1.H19, complete se... 40 6.0
41gb|AF128457.1|AF128457 Oryza sativa subsp. indica BAC clone 16F1... 40 6.0
42gb|AE003643.3| Drosophila melanogaster chromosome 2L, section 52... 40 6.0
43gb|AC153639.4| Mus musculus 6 BAC RP23-124H2 (Roswell Park Cance... 40 6.0
44emb|CT485615.6| Mouse DNA sequence from clone RP23-32L22 on chro... 40 6.0
45gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
46dbj|AP006369.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 6.0 
>ref|XM_472341.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 807

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 304 cggatgagctgctgtgtcgagaagtcgagtatgtggggcgacgacaagggcgaca 358
           |||||||||||||| ||||||||||||||||| || |||| |||| ||| |||||
Sbjct: 668 cggatgagctgctgcgtcgagaagtcgagtatctgcggcgccgacgaggacgaca 614



 Score = 46.1 bits (23), Expect = 0.097
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 416 cgccctgcaacagctgcgcgtaccgca 442
           ||||||||| |||||||||||||||||
Sbjct: 556 cgccctgcagcagctgcgcgtaccgca 530
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                       
Query: 304      cggatgagctgctgtgtcgagaagtcgagtatgtggggcgacgacaagggcgaca 358
                |||||||||||||| ||||||||||||||||| || |||| |||| ||| |||||
Sbjct: 19661888 cggatgagctgctgcgtcgagaagtcgagtatctgcggcgccgacgaggacgaca 19661834



 Score = 46.1 bits (23), Expect = 0.097
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 416      cgccctgcaacagctgcgcgtaccgca 442
                ||||||||| |||||||||||||||||
Sbjct: 19661776 cgccctgcagcagctgcgcgtaccgca 19661750
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>dbj|AK101501.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044C14, full
            insert sequence
          Length = 1854

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                   
Query: 304  cggatgagctgctgtgtcgagaagtcgagtatgtggggcgacgacaagggcgaca 358
            |||||||||||||| ||||||||||||||||| || |||| |||| ||| |||||
Sbjct: 1162 cggatgagctgctgcgtcgagaagtcgagtatctgcggcgccgacgaggacgaca 1108



 Score = 46.1 bits (23), Expect = 0.097
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 416  cgccctgcaacagctgcgcgtaccgca 442
            ||||||||| |||||||||||||||||
Sbjct: 1050 cgccctgcagcagctgcgcgtaccgca 1024
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>emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039C07,
              complete sequence
          Length = 166410

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                     
Query: 304    cggatgagctgctgtgtcgagaagtcgagtatgtggggcgacgacaagggcgaca 358
              |||||||||||||| ||||||||||||||||| || |||| |||| ||| |||||
Sbjct: 112614 cggatgagctgctgcgtcgagaagtcgagtatctgcggcgccgacgaggacgaca 112560



 Score = 46.1 bits (23), Expect = 0.097
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 416    cgccctgcaacagctgcgcgtaccgca 442
              ||||||||| |||||||||||||||||
Sbjct: 112502 cgccctgcagcagctgcgcgtaccgca 112476
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 247     gacggccccgttgtggctgaac 268
               ||||||||||||||||||||||
Sbjct: 8754539 gacggccccgttgtggctgaac 8754560
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>gb|AF440828.1| Streptomyces avermitilis Imp1 (imp1) gene, partial cds; Imp2 (imp2)
            gene, complete cds; and unknown genes
          Length = 7996

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 247  gacggccccgttgtggctgaac 268
            ||||||||||||||||||||||
Sbjct: 2235 gacggccccgttgtggctgaac 2256
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>gb|AC165174.2| Zea mays clone ZMMBBb-127F19, complete sequence
          Length = 187659

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 340    ggcgacgacaagggcgacatcgacg 364
              ||||||||||||||||||| |||||
Sbjct: 139287 ggcgacgacaagggcgacagcgacg 139311
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>gb|AC130721.3| Mus musculus BAC clone RP24-333B3 from chromosome 6, complete
            sequence
          Length = 149502

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 30   aaagaaatgttcaccagcaaa 50
            |||||||||||||||||||||
Sbjct: 2479 aaagaaatgttcaccagcaaa 2499
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>gb|AY738621.1| Natronococcus occultus DnaK gene, partial cds
          Length = 1359

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 344 acgacaagggcgacatcgacg 364
           |||||||||||||||||||||
Sbjct: 851 acgacaagggcgacatcgacg 871
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>gb|AC159742.1| Ornithorhynchus anatinus chromosome UNK clone OABb-263A1, complete
             sequence
          Length = 150582

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 22    gaagaagaaaagaaatgttcaccag 46
             ||||||||||| |||||||||||||
Sbjct: 51211 gaagaagaaaataaatgttcaccag 51187
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>gb|AC149089.4| Mus musculus BAC clone RP23-94H23 from 6, complete sequence
          Length = 189070

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 30     aaagaaatgttcaccagcaaa 50
              |||||||||||||||||||||
Sbjct: 146689 aaagaaatgttcaccagcaaa 146709
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>ref|XM_463851.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2419

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 15   aagatcagaagaagaaaaga 34
            ||||||||||||||||||||
Sbjct: 1470 aagatcagaagaagaaaaga 1489
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>gb|AY294226.1| Uncultured bacterium cosmid gbiox603r, complete sequence
          Length = 40150

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 339 gggcgacgacaagggcgacatcga 362
           |||||||||||||| |||||||||
Sbjct: 244 gggcgacgacaaggacgacatcga 221
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>gb|AF178030.3| Homo sapiens chromosome 8 multiple clones map q23.3, complete sequence
          Length = 310003

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    gaagaaaagaaatgttcacc 44
             ||||||||||||||||||||
Sbjct: 84870 gaagaaaagaaatgttcacc 84889
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>gb|CP000238.1| Baumannia cicadellinicola str. Hc (Homalodisca coagulata), complete
             genome
          Length = 686194

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    tgttcaccagcaaaattaaa 56
             ||||||||||||||||||||
Sbjct: 44442 tgttcaccagcaaaattaaa 44461
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>gb|AC140193.3| Mus musculus BAC clone RP23-247C12 from chromosome 19, complete sequence
          Length = 173527

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     agaagaaaagaaatgttcac 43
              ||||||||||||||||||||
Sbjct: 172030 agaagaaaagaaatgttcac 172011
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>gb|AC113011.9| Mus musculus chromosome 16, clone RP23-173D22, complete sequence
          Length = 210962

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 21     agaagaagaaaagaaatgtt 40
              ||||||||||||||||||||
Sbjct: 155309 agaagaagaaaagaaatgtt 155328
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>gb|AC133503.4| Mus musculus BAC clone RP24-301O19 from chromosome 19, complete sequence
          Length = 161150

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 24     agaagaaaagaaatgttcac 43
              ||||||||||||||||||||
Sbjct: 149031 agaagaaaagaaatgttcac 149050
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>gb|AC117225.3| Mus musculus BAC clone RP23-366F3 from 19, complete sequence
          Length = 149854

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 24    agaagaaaagaaatgttcac 43
             ||||||||||||||||||||
Sbjct: 81888 agaagaaaagaaatgttcac 81907
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>emb|CR718653.2|CNS0GHGJ Tetraodon nigroviridis full-length cDNA
          Length = 1009

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 257 ttgtggctgaacctgatatt 276
           ||||||||||||||||||||
Sbjct: 99  ttgtggctgaacctgatatt 80
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>gb|AC161500.4| Mus musculus chromosome 7, clone RP23-145H5, complete sequence
          Length = 223833

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 404   cggcactgccagcgccctgc 423
             ||||||||||||||||||||
Sbjct: 59584 cggcactgccagcgccctgc 59603
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>emb|AL731545.4| Human DNA sequence from clone RP11-431F18 on chromosome 10 Contains the
             5' end of a novel gene, complete sequence
          Length = 24239

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    ccagcaaaattaaatgacca 62
             ||||||||||||||||||||
Sbjct: 14575 ccagcaaaattaaatgacca 14594
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 395     cagcgcccccggcactgccagcgc 418
               ||||||||||||||| ||||||||
Sbjct: 4619465 cagcgcccccggcacggccagcgc 4619488
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>gb|AY135339.1| Homo sapiens isolate MRPS35P3 mitochondrial ribosomal protein S35
           (MRPS35) pseudogene, nuclear pseudogene, partial
           sequence
          Length = 539

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 32  agaaatgttcaccagcaaaa 51
           ||||||||||||||||||||
Sbjct: 222 agaaatgttcaccagcaaaa 241
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>gb|AF161269.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0034K24, complete sequence
          Length = 142852

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 233   tggaagatgaagtagacggc 252
             ||||||||||||||||||||
Sbjct: 14436 tggaagatgaagtagacggc 14417
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>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29
          Length = 277000

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 345    cgacaagggcgacatcgacg 364
              ||||||||||||||||||||
Sbjct: 228801 cgacaagggcgacatcgacg 228782
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>gb|AC006484.2| Homo sapiens chromosome 5, clone hRPK.448_K_10, complete sequence
          Length = 156814

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    agaaatgttcaccagcaaaa 51
             ||||||||||||||||||||
Sbjct: 39836 agaaatgttcaccagcaaaa 39817
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>gb|AC182541.1| Ateles geoffroyi clone UC1-374M20, complete sequence
          Length = 138146

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 18     atcagaagaagaaaagaaat 37
              ||||||||||||||||||||
Sbjct: 125635 atcagaagaagaaaagaaat 125654
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 346     gacaagggcgacatcgacgg 365
               ||||||||||||||||||||
Sbjct: 3110524 gacaagggcgacatcgacgg 3110505
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>gb|AC092228.1|AC092228 Drosophila melanogaster, chromosome 2L, region 35X-35X, BAC clone
             BACR21J17, complete sequence
          Length = 174974

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     aataacaaatttgaagatca 21
             ||||||||||||||||||||
Sbjct: 52326 aataacaaatttgaagatca 52307
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>ref|NG_002895.1| Homo sapiens mitochondrial ribosomal protein S35 pseudogene 3
           (MRPS35P3) on chromosome 10
          Length = 539

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 32  agaaatgttcaccagcaaaa 51
           ||||||||||||||||||||
Sbjct: 222 agaaatgttcaccagcaaaa 241
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 233      tggaagatgaagtagacggc 252
                ||||||||||||||||||||
Sbjct: 23372539 tggaagatgaagtagacggc 23372558
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
              complete sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 15     aagatcagaagaagaaaaga 34
              ||||||||||||||||||||
Sbjct: 729388 aagatcagaagaagaaaaga 729407
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>gb|AC010738.5| Homo sapiens BAC clone RP11-443I9 from 2, complete sequence
          Length = 121448

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 18     atcagaagaagaaaagaaat 37
              ||||||||||||||||||||
Sbjct: 114094 atcagaagaagaaaagaaat 114113
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>dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0036E06
          Length = 137926

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 15   aagatcagaagaagaaaaga 34
            ||||||||||||||||||||
Sbjct: 7519 aagatcagaagaagaaaaga 7538
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>gb|AC158669.3| Mus musculus 6 BAC RP23-66K6 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 242779

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 21     agaagaagaaaagaaatgtt 40
              ||||||||||||||||||||
Sbjct: 154377 agaagaagaaaagaaatgtt 154396
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>dbj|AP004090.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1399_H05
          Length = 147670

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    aagatcagaagaagaaaaga 34
             ||||||||||||||||||||
Sbjct: 86283 aagatcagaagaagaaaaga 86302
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>dbj|AK069550.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023024B12, full
            insert sequence
          Length = 2419

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 15   aagatcagaagaagaaaaga 34
            ||||||||||||||||||||
Sbjct: 1470 aagatcagaagaagaaaaga 1489
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>dbj|AK062468.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-E04, full
           insert sequence
          Length = 594

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 233 tggaagatgaagtagacggc 252
           ||||||||||||||||||||
Sbjct: 419 tggaagatgaagtagacggc 400
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>gb|AF119222.1|AF119222 Oryza sativa BAC clone 1.H19, complete sequence
          Length = 77605

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 233  tggaagatgaagtagacggc 252
            ||||||||||||||||||||
Sbjct: 6821 tggaagatgaagtagacggc 6802
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>gb|AF128457.1|AF128457 Oryza sativa subsp. indica BAC clone 16F19 php20725 region,
           complete sequence
          Length = 70311

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 233 tggaagatgaagtagacggc 252
           ||||||||||||||||||||
Sbjct: 537 tggaagatgaagtagacggc 518
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>gb|AE003643.3| Drosophila melanogaster chromosome 2L, section 52 of 83 of the complete
              sequence
          Length = 236144

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 2      aataacaaatttgaagatca 21
              ||||||||||||||||||||
Sbjct: 180250 aataacaaatttgaagatca 180231
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>gb|AC153639.4| Mus musculus 6 BAC RP23-124H2 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 190211

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     agaagaagaaaagaaatgtt 40
              ||||||||||||||||||||
Sbjct: 133470 agaagaagaaaagaaatgtt 133451
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>emb|CT485615.6| Mouse DNA sequence from clone RP23-32L22 on chromosome 16, complete
             sequence
          Length = 197249

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    agaagaagaaaagaaatgtt 40
             ||||||||||||||||||||
Sbjct: 31045 agaagaagaaaagaaatgtt 31064
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 233      tggaagatgaagtagacggc 252
                ||||||||||||||||||||
Sbjct: 23682449 tggaagatgaagtagacggc 23682468
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>dbj|AP006369.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT20N03, TM0212,
             complete sequence
          Length = 87407

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 21    agaagaagaaaagaaatgttcaccagca 48
             ||||||||| ||||| ||||||||||||
Sbjct: 40659 agaagaagacaagaactgttcaccagca 40686


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,424,277
Number of Sequences: 3902068
Number of extensions: 4424277
Number of successful extensions: 164329
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 163928
Number of HSP's gapped (non-prelim): 401
length of query: 446
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 424
effective length of database: 17,147,199,772
effective search space: 7270412703328
effective search space used: 7270412703328
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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