>JHD1_CRYNE (Q55NZ6) JmjC domain-containing histone demethylation protein 1 (EC|
           1.14.11.-)
          Length = 879

 Score = 33.9 bits (76), Expect = 0.11
 Identities = 18/63 (28%), Positives = 28/63 (44%)
 Frame = +2

Query: 86  RENPSTGVVYFRSNLILPHTTMLGAHRGSPDLFFNRSREHQASSHASTSRANVASKCPPS 265
           + + ST     +SN+  P T+  G    SP++     RE QA S A T  ++     P  
Sbjct: 152 KRSASTSAPLLKSNIKRPRTSTKGQETASPEIDMKSEREQQAESTAGTPASDAPQGRPKR 211

Query: 266 RIA 274
           + A
Sbjct: 212 KTA 214

>YA84_SCHPO (Q09773) Hypothetical protein C22F3.04 in chromosome I|
          Length = 1428

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +2

Query: 89   ENPSTGVVYFRSNLILPHTTMLGAHRGSPDLFFNR 193
            E P  G + F S + L HT +LG + G P L   +
Sbjct: 1016 EKPIIGGIEFSSGMGLLHTALLGVYAGVPTLLIKQ 1050

>RBL_SYNP2 (Q44176) Ribulose bisphosphate carboxylase large chain (EC|
           4.1.1.39) (RuBisCO large subunit)
          Length = 470

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -3

Query: 312 RERTQAPMRQGNEAMREGGHFEATLARLVDAW 217
           R   ++  R+GN+ +RE G +   LA  +D W
Sbjct: 426 RNEGRSLAREGNDVLREAGKWSPELAAALDLW 457

>URB1_USTMA (P40349) Siderophore biosynthesis regulatory protein URBS1|
          Length = 950

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = +2

Query: 194 SREHQASSHASTSRANVASKCPPSRIASFP 283
           S  HQ ++ AS+S ++ +S  PP RIA+ P
Sbjct: 18  SHHHQQAAAASSSSSSSSSHHPPPRIAARP 47


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,768,133
Number of Sequences: 219361
Number of extensions: 813167
Number of successful extensions: 2337
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2337
length of database: 80,573,946
effective HSP length: 81
effective length of database: 62,805,705
effective search space used: 1507336920
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)