Clone Information

BLAST Search Result

Clone Name	rbart26g02
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	GP1BA_HUMAN (P07359) Platelet glycoprotein Ib alpha chain precur...	36	0.044
2	MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)	35	0.13
3	WSC4_YEAST (P38739) Cell wall integrity and stress response comp...	33	0.29
4	VGLX_EHV1B (P28968) Glycoprotein X precursor	33	0.37
5	MUC1_YEAST (P08640) Mucin-like protein 1 precursor	33	0.37
6	SGS3_DROER (P13730) Salivary glue protein Sgs-3 precursor	32	0.64
7	HKR1_YEAST (P41809) Hansenula MRAKII killer toxin-resistant prot...	32	0.83
8	CD45_HUMAN (P08575) Leukocyte common antigen precursor (EC 3.1.3...	31	1.4
9	VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor	30	2.4
10	ATCU_YERPE (Q8ZCA7) Copper-transporting P-type ATPase (EC 3.6.3.4)	30	3.2
11	BCL3_HUMAN (P20749) B-cell lymphoma 3-encoded protein (Protein B...	30	3.2
12	MUC2L_RAT (P98089) Intestinal mucin-like protein (MLP) (Fragment)	30	4.1
13	ZAN_RABIT (P57999) Zonadhesin (Fragment)	30	4.1
14	SGS3_DROME (P02840) Salivary glue protein Sgs-3 precursor	30	4.1
15	RHP16_SCHPO (P79051) DNA repair protein rhp16 (RAD16 homolog)	29	5.4
16	MUC1_XENLA (Q05049) Integumentary mucin C.1 (FIM-C.1) (Fragment)	29	5.4
17	CLFA_STAAU (Q53653) Clumping factor A precursor (Fibrinogen-bind...	29	5.4
18	CLFA_STAAR (Q6GIK4) Clumping factor A precursor (Fibrinogen-bind...	29	5.4
19	YDI6_SCHPO (Q92344) Hypothetical protein C1F8.06 in chromosome I	29	5.4
20	AFLR_EMENI (P52957) Sterigmatocystin biosynthesis regulatory pro...	29	5.4
21	GPR64_RAT (Q8CJ11) G-protein coupled receptor 64 precursor (Epid...	29	7.1
22	VILI_DICDI (P36418) Protovillin (100 kDa actin-binding protein)	29	7.1
23	UBP3_YEAST (Q01477) Ubiquitin carboxyl-terminal hydrolase 3 (EC ...	28	9.2
24	CLFA_STAAC (Q5HHM8) Clumping factor A precursor (Fibrinogen-bind...	28	9.2
25	CLFA_STAAN (Q99VJ4) Clumping factor A precursor (Fibrinogen-bind...	28	9.2
26	CLFA_STAAM (Q932C5) Clumping factor A precursor (Fibrinogen-bind...	28	9.2
27	RL37B_SCHPO (P05733) 60S ribosomal protein L37-B (L37-2) (YL27)	28	9.2
28	RL37A_SCHPO (P59289) 60S ribosomal protein L37-A (L37-1)	28	9.2
29	GPR64_MOUSE (Q8CJ12) G-protein coupled receptor 64 precursor (Ep...	28	9.2
30	GPR64_HUMAN (Q8IZP9) G-protein coupled receptor 64 precursor (Ep...	28	9.2

>GP1BA_HUMAN (P07359) Platelet glycoprotein Ib alpha chain precursor|
           (Glycoprotein Ibalpha) (GP-Ib alpha) (GPIbA)
           (GPIb-alpha) (Antigen CD42b-alpha) (CD42b antigen)
           [Contains: Glycocalicin]
          Length = 626

 Score = 36.2 bits (82), Expect = 0.044
 Identities = 20/42 (47%), Positives = 28/42 (66%)
 Frame = +3

Query: 327 SKPAPTRSTNTSLPITTRATSSTFLLISATTVSSPSSPLATT 452
           S+PAP+ +T    PI T ATS T +L+SAT++ +P S   TT
Sbjct: 415 SEPAPSPTTPEPTPIPTIATSPT-ILVSATSLITPKSTFLTT 455

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>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)|
          Length = 5179

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = +3

Query: 297  TRTIPMAKAASKPAPTRSTNTSLPITTRATSSTFLLISATTVSSPSSPLATT 452
            T T P     +   P  +T  S PITT  +  T  + + +  ++PSSP+ TT
Sbjct: 1661 TTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTT 1712



 Score = 30.8 bits (68), Expect = 1.9
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +3

Query: 333  PAPTRSTNTSLPITTRATSSTFLLISATTVSSPSSPLATT 452
            P+P  +T T+LP TT  +  T    +    ++PS P+ TT
Sbjct: 1406 PSPPPTTTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTT 1445



 Score = 28.9 bits (63), Expect = 7.1
 Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
 Frame = +3

Query: 297  TRTIPMAK-AASKPAPTRST-NTSLPITTRATSSTFLL------ISATTVSSPSSPLATT 452
            T T P+A+   S P P  ST  TS   ++  T ST LL      I  T+ + PS+P A T
Sbjct: 4201 TSTAPIAELTTSNPPPESSTPQTSRSTSSPLTESTTLLSTLPPAIEMTSTAPPSTPTAPT 4260



 Score = 28.9 bits (63), Expect = 7.1
 Identities = 15/45 (33%), Positives = 19/45 (42%)
 Frame = +3

Query: 297  TRTIPMAKAASKPAPTRSTNTSLPITTRATSSTFLLISATTVSSP 431
            T T P +     P PT  T  S   T    ++T   +  TT SSP
Sbjct: 1711 TTTTPSSTTTPSPPPTTMTTPSPTTTPSPPTTTMTTLPPTTTSSP 1755

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>WSC4_YEAST (P38739) Cell wall integrity and stress response component 4|
           precursor
          Length = 605

 Score = 33.5 bits (75), Expect = 0.29
 Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
 Frame = +3

Query: 180 QLSTAKPRKKQLSGHQILAWTGXXXXXXXXXXXXXXXXXTR--TIPMAKAASKPAPTRST 353
           +LST+ P     S     + +                  T   T+     +S  + T +T
Sbjct: 186 KLSTSIPTSTTSSTSTTTSTSSSTSTTVSVTSSTSTTTSTTSSTLISTSTSSSSSSTPTT 245

Query: 354 NTSLPITTRATSSTFLLISATTVSSPSSPLATT 452
            +S PI+T  TSST    S T+ +S S+P +++
Sbjct: 246 TSSAPISTSTTSSTSTSTSTTSPTSSSAPTSSS 278



 Score = 30.4 bits (67), Expect = 2.4
 Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
 Frame = +3

Query: 327 SKPAPTRSTNTSLPITTRATSSTFLLISATTV---SSPSSPLATT 452
           S  APT S+NT+   TT  T+S     S+TTV   S+ +SP+ +T
Sbjct: 270 SSSAPTSSSNTTPTSTTFTTTSPSTAPSSTTVTYTSTTASPITST 314

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>VGLX_EHV1B (P28968) Glycoprotein X precursor|
          Length = 797

 Score = 33.1 bits (74), Expect = 0.37
 Identities = 19/73 (26%), Positives = 28/73 (38%)
 Frame = +3

Query: 234 AWTGXXXXXXXXXXXXXXXXXTRTIPMAKAASKPAPTRSTNTSLPITTRATSSTFLLISA 413
           A T                  T T     +A+  A T +  T+   TT AT++     +A
Sbjct: 198 ATTTAATTTAATTTAATTTAATTTAATTSSATTAATTTAATTTAATTTAATTTAATTTAA 257

Query: 414 TTVSSPSSPLATT 452
           TT  SP+S   +T
Sbjct: 258 TTTGSPTSGSTST 270

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>MUC1_YEAST (P08640) Mucin-like protein 1 precursor|
          Length = 1367

 Score = 33.1 bits (74), Expect = 0.37
 Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
 Frame = +3

Query: 303 TIPMAKAASKPAPTRSTNT----SLPITTRATSSTFLLISATTVSSPSSPLATTRQQRRE 470
           T    +++S P PT S++T    S P+T+  T S+   ++++T  S S+P+ T      E
Sbjct: 345 TSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSSTTE 404



 Score = 32.7 bits (73), Expect = 0.49
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
 Frame = +3

Query: 318 KAASKPAPTRSTNT----SLPITTRATSSTFLLISATTVSSPSSPLATTRQQRRE 470
           +++S P PT S++T    S P+T+  T S+   ++++T  S S+P+ T      E
Sbjct: 662 ESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSSTTE 716



 Score = 32.0 bits (71), Expect = 0.83
 Identities = 16/54 (29%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
 Frame = +3

Query: 303 TIPMAKAASKPAPTRSTNT----SLPITTRATSSTFLLISATTVSSPSSPLATT 452
           T    +++S P PT S++T    S P+T+  T S+   ++++T  S S+P+ ++
Sbjct: 384 TSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVTSS 437



 Score = 30.0 bits (66), Expect = 3.2
 Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 7/58 (12%)
 Frame = +3

Query: 318 KAASKPAPTRSTNT----SLPITTRATSSTFLLI---SATTVSSPSSPLATTRQQRRE 470
           +++S PAPT S++T    S P+T+  T S+   +   S++T  S S+P+ T      E
Sbjct: 605 ESSSAPAPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTE 662



 Score = 28.9 bits (63), Expect = 7.1
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
 Frame = +3

Query: 303 TIPMAKAASKPAPTRSTNT----SLPITTRATSSTFLLI---SATTVSSPSSPLATTRQQ 461
           T    +++S P PT S++T    S P+T+  T S+   +   S++T  S S+P+ T    
Sbjct: 543 TSSTTESSSAPVPTPSSSTTESSSTPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSS 602

Query: 462 RRE 470
             E
Sbjct: 603 TTE 605



 Score = 28.9 bits (63), Expect = 7.1
 Identities = 17/52 (32%), Positives = 32/52 (61%), Gaps = 7/52 (13%)
 Frame = +3

Query: 318 KAASKPAPTRSTNT----SLPITTRATSSTFLLI---SATTVSSPSSPLATT 452
           +++S PAPT S++T    S P+T+  T S+   +   S++T  S S+P+ ++
Sbjct: 521 ESSSAPAPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSTPVTSS 572



 Score = 28.9 bits (63), Expect = 7.1
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = +3

Query: 327 SKPAPTRSTNT---SLPITTRATSSTFLLISATTVSSPSSPLATTRQQRRE 470
           S  AP  S+ T   S P+T+  T S+   ++++T  S S+P+ T      E
Sbjct: 417 SSSAPVTSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSSTTE 467



 Score = 28.5 bits (62), Expect = 9.2
 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
 Frame = +3

Query: 318 KAASKPAPTRSTNT----SLPITTRATSSTFLLI---SATTVSSPSSPLATTRQQRRE 470
           +++S P PT S++T    S P+T+  T S+   +   S++T  S S+P+ T      E
Sbjct: 731 ESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTE 788

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>SGS3_DROER (P13730) Salivary glue protein Sgs-3 precursor|
          Length = 328

 Score = 32.3 bits (72), Expect = 0.64
 Identities = 19/57 (33%), Positives = 26/57 (45%)
 Frame = +3

Query: 297 TRTIPMAKAASKPAPTRSTNTSLPITTRATSSTFLLISATTVSSPSSPLATTRQQRR 467
           T+  P  +A +K APT+   T    T RAT+       ATT  +P+    T R   R
Sbjct: 218 TKRAPTKRATTKRAPTKRATTKRAPTKRATTKRAPTKRATTKRAPTKRATTKRATAR 274



 Score = 31.6 bits (70), Expect = 1.1
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = +3

Query: 297 TRTIPMAKAASKPAPTRSTNTSLPITTRATSSTFLLISATTVSSPSSPLATTR 455
           T+  P  +A +K APT+   T    T RAT+       ATT  +P+    T R
Sbjct: 198 TKRAPTKRATTKRAPTKRVTTKRAPTKRATTKRAPTKRATTKRAPTKRATTKR 250



 Score = 31.6 bits (70), Expect = 1.1
 Identities = 30/128 (23%), Positives = 44/128 (34%)
 Frame = +3

Query: 72  TKKMASATNPACIVHCRSRAGTRAHTGRKAGRK*VRQLSTAKPRKKQLSGHQILAWTGXX 251
           TK+  +  NP      R     RA T R   R+         P K++ +    +  T   
Sbjct: 142 TKRATTRRNPTRRTTTRRAPTKRATTKRATTRR--------NPTKRKTTRRTTVRAT-KT 192

Query: 252 XXXXXXXXXXXXXXXTRTIPMAKAASKPAPTRSTNTSLPITTRATSSTFLLISATTVSSP 431
                          T+  P  +  +K APT+   T    T RAT+       ATT  +P
Sbjct: 193 TKRATTKRAPTKRATTKRAPTKRVTTKRAPTKRATTKRAPTKRATTKRAPTKRATTKRAP 252

Query: 432 SSPLATTR 455
           +    T R
Sbjct: 253 TKRATTKR 260



 Score = 28.5 bits (62), Expect = 9.2
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +3

Query: 297 TRTIPMAKAASKPAPTRSTNTSLPITTRATSSTFLLISATTVSSPSSP 440
           T+  P  +A +K APT+   T    T RAT+       ATT  + + P
Sbjct: 228 TKRAPTKRATTKRAPTKRATTKRAPTKRATTKRAPTKRATTKRATARP 275

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>HKR1_YEAST (P41809) Hansenula MRAKII killer toxin-resistant protein 1|
           precursor
          Length = 1802

 Score = 32.0 bits (71), Expect = 0.83
 Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 7/49 (14%)
 Frame = +3

Query: 327 SKPAPTRSTNTSLPITTRATSSTFL-------LISATTVSSPSSPLATT 452
           S PA   ST TS P    A SST+         IS+T  SSPS+P+A +
Sbjct: 719 SAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVS 767



 Score = 32.0 bits (71), Expect = 0.83
 Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 7/49 (14%)
 Frame = +3

Query: 327 SKPAPTRSTNTSLPITTRATSSTFL-------LISATTVSSPSSPLATT 452
           S PA   ST TS P    A SST+         IS+T  SSPS+P+A +
Sbjct: 691 SAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVS 739



 Score = 32.0 bits (71), Expect = 0.83
 Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 7/49 (14%)
 Frame = +3

Query: 327 SKPAPTRSTNTSLPITTRATSSTFL-------LISATTVSSPSSPLATT 452
           S PA   ST TS P    A SST+         IS+T  SSPS+P+A +
Sbjct: 663 SAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVS 711



 Score = 32.0 bits (71), Expect = 0.83
 Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 7/49 (14%)
 Frame = +3

Query: 327 SKPAPTRSTNTSLPITTRATSSTFL-------LISATTVSSPSSPLATT 452
           S PA   ST TS P    A SST+         IS+T  SSPS+P+A +
Sbjct: 523 SAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVS 571



 Score = 32.0 bits (71), Expect = 0.83
 Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 7/49 (14%)
 Frame = +3

Query: 327 SKPAPTRSTNTSLPITTRATSSTFL-------LISATTVSSPSSPLATT 452
           S PA   ST TS P    A SST+         IS+T  SSPS+P+A +
Sbjct: 495 SAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVS 543



 Score = 31.6 bits (70), Expect = 1.1
 Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 7/49 (14%)
 Frame = +3

Query: 327 SKPAPTRSTNTSLPITTRATSSTF-------LLISATTVSSPSSPLATT 452
           S PA   ST TS P    A SST+       + IS+T  SSPS P+A +
Sbjct: 551 SAPAAISSTYTSSPSAPVAVSSTYTSSPSAPVAISSTYTSSPSVPVAVS 599



 Score = 31.2 bits (69), Expect = 1.4
 Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 7/47 (14%)
 Frame = +3

Query: 327 SKPAPTRSTNTSLPITTRATSSTF-------LLISATTVSSPSSPLA 446
           S P    ST TS P    A SST+       + +S+T  SSPS+P+A
Sbjct: 537 SAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPVA 583



 Score = 30.8 bits (68), Expect = 1.9
 Identities = 21/49 (42%), Positives = 25/49 (51%), Gaps = 7/49 (14%)
 Frame = +3

Query: 327 SKPAPTRSTNTSLPITTRATSSTFL-------LISATTVSSPSSPLATT 452
           S PA   ST TS P    A SST+         IS+T  SSPS P+A +
Sbjct: 635 SAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVS 683



 Score = 30.8 bits (68), Expect = 1.9
 Identities = 21/49 (42%), Positives = 25/49 (51%), Gaps = 7/49 (14%)
 Frame = +3

Query: 327 SKPAPTRSTNTSLPITTRATSSTFL-------LISATTVSSPSSPLATT 452
           S PA   ST TS P    A SST+         IS+T  SSPS P+A +
Sbjct: 607 SAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVS 655



 Score = 30.4 bits (67), Expect = 2.4
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 7/47 (14%)
 Frame = +3

Query: 327 SKPAPTRSTNTSLPITTRATSSTF-------LLISATTVSSPSSPLA 446
           S P    ST TS P    A SST+       + +S+T  SSPS+P A
Sbjct: 621 SAPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAA 667



 Score = 30.4 bits (67), Expect = 2.4
 Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 7/49 (14%)
 Frame = +3

Query: 327 SKPAPTRSTNTSLPITTRATSSTFL-------LISATTVSSPSSPLATT 452
           S P    ST TS P    A SST+         IS+T  SSPS+P+A +
Sbjct: 579 SAPVAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVS 627



 Score = 30.0 bits (66), Expect = 3.2
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 7/47 (14%)
 Frame = +3

Query: 327 SKPAPTRSTNTSLPITTRATSSTF-------LLISATTVSSPSSPLA 446
           S P    ST TS P    A SST+       + +S+T  SSPS+P A
Sbjct: 593 SVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAA 639



 Score = 28.5 bits (62), Expect = 9.2
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = +3

Query: 315 AKAASKPAPTRSTNTSLPITTRATSSTFLLISATTVSSPSSPLATT 452
           A + S P    ST TS P    A SST+        SSPS+P+A +
Sbjct: 477 ASSPSVPVAVSSTYTSSPSAPAAISSTY-------TSSPSAPVAVS 515

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>CD45_HUMAN (P08575) Leukocyte common antigen precursor (EC 3.1.3.48) (L-CA)|
           (CD45 antigen) (T200)
          Length = 1304

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 18/46 (39%), Positives = 26/46 (56%)
 Frame = +3

Query: 297 TRTIPMAKAASKPAPTRSTNTSLPITTRATSSTFLLISATTVSSPS 434
           T T+ +A  +S   P R++NT++   T  TS  +L  S TT  SPS
Sbjct: 165 TTTLSLAHHSSAALPARTSNTTI---TANTSDAYLNASETTTLSPS 207

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>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor|
          Length = 866

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 17/71 (23%), Positives = 25/71 (35%)
 Frame = +3

Query: 240 TGXXXXXXXXXXXXXXXXXTRTIPMAKAASKPAPTRSTNTSLPITTRATSSTFLLISATT 419
           T                  T       A +  A T +  T+   TT AT++     +ATT
Sbjct: 269 TAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATT 328

Query: 420 VSSPSSPLATT 452
             SP+S   +T
Sbjct: 329 TGSPTSGSTST 339

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>ATCU_YERPE (Q8ZCA7) Copper-transporting P-type ATPase (EC 3.6.3.4)|
          Length = 961

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
 Frame = +3

Query: 303 TIP---MAKAASKPAPTRS---TNTSLPITTRATSSTFLLISATTVSSPSSPLATT 452
           T+P   +A A S  + T +   TNT+LP  T +T+ST    SAT+ +   +PL  T
Sbjct: 159 TVPATNVALATSTVSDTNTVLPTNTALPTNTTSTTSTADTASATSTAPVINPLPVT 214

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>BCL3_HUMAN (P20749) B-cell lymphoma 3-encoded protein (Protein Bcl-3)|
          Length = 446

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 18/44 (40%), Positives = 27/44 (61%)
 Frame = +3

Query: 303 TIPMAKAASKPAPTRSTNTSLPITTRATSSTFLLISATTVSSPS 434
           T P + +   P+P RS NTS   ++R +S+   L+SA+  SSPS
Sbjct: 355 TRPASTSQPDPSPDRSANTSPESSSRLSSNG--LLSASPSSSPS 396

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>MUC2L_RAT (P98089) Intestinal mucin-like protein (MLP) (Fragment)|
          Length = 837

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = +3

Query: 297 TRTIPMAKAASKPAPTRSTNTSLPITTRATSSTFLLISATTVSSPSSPLATT 452
           T + P     + P  +++T  S P TT + S+     S ++ S+PS+P  TT
Sbjct: 19  TPSTPPPSTPTTPTSSQTTTPSTPSTTSSKSTPSTPQSTSSKSTPSTPPKTT 70

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>ZAN_RABIT (P57999) Zonadhesin (Fragment)|
          Length = 2282

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 18/50 (36%), Positives = 30/50 (60%)
 Frame = +3

Query: 303 TIPMAKAASKPAPTRSTNTSLPITTRATSSTFLLISATTVSSPSSPLATT 452
           T+P  +  + P   RST TSL  TT   S++   +++TT+S+ ++P  TT
Sbjct: 453 TVP-TEETTPPTTARSTLTSLEPTTHTPSTS---LTSTTLSTTTTPSPTT 498

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>SGS3_DROME (P02840) Salivary glue protein Sgs-3 precursor|
          Length = 307

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
 Frame = +3

Query: 327 SKPAPTRSTNTSLPITT----RATSSTFLLISATTVSSPSSPLATTRQ 458
           SKP   + T T LP TT    +AT++      ATT  + ++   TT+Q
Sbjct: 71  SKPTTPKQTTTQLPCTTPTTTKATTTKPTTTKATTTKATTTKPTTTKQ 118

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>RHP16_SCHPO (P79051) DNA repair protein rhp16 (RAD16 homolog)|
          Length = 861

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = +2

Query: 89  SNESSMYCTLPIEGRDTSTHRKKSGEKI-SSPTLYG*TKKEATLRSPNL 232
           +N SS + T P+   DTSTH   S + + ++P     + ++ +LRS NL
Sbjct: 71  NNTSSQHSTPPLSISDTSTHTGSSTDNVEANPNTGFSSARKRSLRSSNL 119

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>MUC1_XENLA (Q05049) Integumentary mucin C.1 (FIM-C.1) (Fragment)|
          Length = 662

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = +3

Query: 297 TRTIPMAKAASKPAPTRSTNTSLPITTRATSSTFLLISATTVSSPSSPLATT 452
           T+  P     +K  PT +T T    TT   ++T     ATT  +P++   TT
Sbjct: 239 TKATPTTTTTTKATPTTTTTTKATTTTTTPTTTTTTTKATT--TPTTTTTTT 288



 Score = 28.9 bits (63), Expect = 7.1
 Identities = 14/49 (28%), Positives = 27/49 (55%)
 Frame = +3

Query: 324 ASKPAPTRSTNTSLPITTRATSSTFLLISATTVSSPSSPLATTRQQRRE 470
           A+   PT +T T    TT+AT++T    + TT ++ ++   T+ + + E
Sbjct: 481 ATTTTPTTTTTTPTTTTTKATTTTPTTTTTTTTTTKATTTTTSGECKME 529



 Score = 28.9 bits (63), Expect = 7.1
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
 Frame = +3

Query: 303 TIPMAKAASKPAPTRSTNTSLPITT---RATSSTFLLISATTVSSPSSPLATT 452
           TI +A   + P  T +T  + P TT   +AT +T     ATT ++  +   TT
Sbjct: 222 TIQIATTTTTPTTTTTTTKATPTTTTTTKATPTTTTTTKATTTTTTPTTTTTT 274

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>CLFA_STAAU (Q53653) Clumping factor A precursor (Fibrinogen-binding protein A)|
           (Fibrinogen receptor A)
          Length = 933

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = +3

Query: 303 TIPMAKAASKPAPTRSTNTSLPITTRATSSTFLLISATTVSSPSSPLATTRQQ 461
           T      A+ PA T+S+NT+       TS+        TVSS +SP  +T  +
Sbjct: 118 TTTTTNQANTPATTQSSNTNAEELVNQTSNETTFNDTNTVSSVNSPQNSTNAE 170

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>CLFA_STAAR (Q6GIK4) Clumping factor A precursor (Fibrinogen-binding protein A)|
           (Fibrinogen receptor A)
          Length = 1029

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +3

Query: 303 TIPMAKAASKPAPTRSTNTSLPITTRATSSTFLLISATTVSSPSSPLATTRQQ 461
           T      A+ PA T+S+NT+   +   TS+        TVSS +SP  +T  +
Sbjct: 118 TTTATNQANTPATTQSSNTNAEESVNQTSNETTSNDTNTVSSVNSPQNSTNAE 170

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>YDI6_SCHPO (Q92344) Hypothetical protein C1F8.06 in chromosome I|
          Length = 385

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 13/39 (33%), Positives = 27/39 (69%)
 Frame = +3

Query: 321 AASKPAPTRSTNTSLPITTRATSSTFLLISATTVSSPSS 437
           ++S    +  +++S+PITT ++S +F+  S+ T+S+ SS
Sbjct: 81  SSSSSTSSEYSSSSIPITTVSSSDSFIPSSSQTISASSS 119

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>AFLR_EMENI (P52957) Sterigmatocystin biosynthesis regulatory protein|
          Length = 433

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 19/52 (36%), Positives = 28/52 (53%)
 Frame = +3

Query: 297 TRTIPMAKAASKPAPTRSTNTSLPITTRATSSTFLLISATTVSSPSSPLATT 452
           TR I + +  + P+PT  TN     TT AT++T      TT S+  +P+ TT
Sbjct: 66  TRVIGVEQPKTAPSPTTPTN-----TTAATTATKAGPPVTTDSAVHTPVITT 112

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>GPR64_RAT (Q8CJ11) G-protein coupled receptor 64 precursor|
           (Epididymis-specific protein 6) (Re6 receptor)
          Length = 1013

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +2

Query: 17  ADLIILSRVFLLNWWVARYKKNGF 88
           A L++L+ VFLL+ W+A Y   GF
Sbjct: 666 AALLLLNLVFLLDSWIALYNARGF 689

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>VILI_DICDI (P36418) Protovillin (100 kDa actin-binding protein)|
          Length = 959

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 5/53 (9%)
 Frame = +3

Query: 309 PMAKAASKPAPTRSTNTSLPITTRA-----TSSTFLLISATTVSSPSSPLATT 452
           P   A  KP  T +  T  PITT       T +  + +  TTV++PS    TT
Sbjct: 835 PTTAATPKPITTPTVTTPKPITTPTVATLKTVTPAVTLKPTTVTTPSKVATTT 887

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>UBP3_YEAST (Q01477) Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 3)
           (Ubiquitin-specific-processing protease 3)
           (Deubiquitinating enzyme 3)
          Length = 912

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = +3

Query: 315 AKAASKPAPTRSTNTSLPI--TTRATSSTFLLISATTVSSPSSPLATTRQQRREK 473
           ++ AS    + S  T  PI  TT   SST +  +A T+   SSPL + + Q+++K
Sbjct: 360 SRQASNKTVSGSMVTKTPISGTTAGVSSTNM--AAATIGKSSSPLLSKQPQKKDK 412

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>CLFA_STAAC (Q5HHM8) Clumping factor A precursor (Fibrinogen-binding protein A)|
           (Fibrinogen receptor A)
          Length = 933

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = +3

Query: 303 TIPMAKAASKPAPTRSTNTSLPITTRATSSTFLLISATTVSSPSSPLATTRQQ 461
           T      A+ PA T+S+NT+       TS+        TVSS +SP  +T  +
Sbjct: 118 TTTTTNQANTPATTQSSNTNAEELVNQTSNETTSNDTNTVSSVNSPQNSTNAE 170

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>CLFA_STAAN (Q99VJ4) Clumping factor A precursor (Fibrinogen-binding protein A)|
           (Fibrinogen receptor A)
          Length = 989

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = +3

Query: 303 TIPMAKAASKPAPTRSTNTSLPITTRATSSTFLLISATTVSSPSSPLATTRQQ 461
           T      A+ PA T+S+NT+       TS+        TVSS +SP  +T  +
Sbjct: 118 TTTTTNQANTPATTQSSNTNAEELVNQTSNETTSNDTNTVSSVNSPQNSTNAE 170

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>CLFA_STAAM (Q932C5) Clumping factor A precursor (Fibrinogen-binding protein A)|
           (Fibrinogen receptor A)
          Length = 935

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = +3

Query: 303 TIPMAKAASKPAPTRSTNTSLPITTRATSSTFLLISATTVSSPSSPLATTRQQ 461
           T      A+ PA T+S+NT+       TS+        TVSS +SP  +T  +
Sbjct: 118 TTTTTNQANTPATTQSSNTNAEELVNQTSNETTSNDTNTVSSVNSPQNSTNAE 170

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>RL37B_SCHPO (P05733) 60S ribosomal protein L37-B (L37-2) (YL27)|
          Length = 90

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 357 CSCCGWAPASTRPSPWGSSS 298
           C+CCG+  A TR   WG+ +
Sbjct: 33  CACCGYPAAKTRSYNWGAKA 52

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>RL37A_SCHPO (P59289) 60S ribosomal protein L37-A (L37-1)|
          Length = 88

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 357 CSCCGWAPASTRPSPWGSSS 298
           C+CCG+  A TR   WG+ +
Sbjct: 33  CACCGYPAAKTRSYNWGAKA 52

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>GPR64_MOUSE (Q8CJ12) G-protein coupled receptor 64 precursor|
           (Epididymis-specific protein 6) (Me6 receptor)
          Length = 1009

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +2

Query: 17  ADLIILSRVFLLNWWVARYKKNGF 88
           A L++L+ +FLL+ W+A Y   GF
Sbjct: 662 AALLLLNLIFLLDSWIALYNTRGF 685

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>GPR64_HUMAN (Q8IZP9) G-protein coupled receptor 64 precursor|
           (Epididymis-specific protein 6) (He6 receptor)
          Length = 1017

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +2

Query: 17  ADLIILSRVFLLNWWVARYKKNG 85
           A L++L+ VFLL+ W+A YK  G
Sbjct: 670 AALLLLNLVFLLDSWIALYKMQG 692


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,417,266
Number of Sequences: 219361
Number of extensions: 831839
Number of successful extensions: 3293
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 3042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3261
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result