ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart26g02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_191419.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 684 Score = 256 bits (129), Expect = 6e-65 Identities = 196/217 (90%), Gaps = 6/217 (2%) Strand = Plus / Minus Query: 263 gccgtcggcctcgtcgccggtgatctggtcgagcacgaggacgatccccatggcgaaggc 322 |||||||||||||||||||| |||||| |||||||||||||||||| |||||||||| || Sbjct: 645 gccgtcggcctcgtcgccggcgatctgatcgagcacgaggacgatcgccatggcgaacgc 586 Query: 323 cgcgtcgaagccggcgcccacccgcagcacgaacacgtccctgcccatcaccacccgcgc 382 ||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 585 cgcgtcgaacccggcgcccacccgcaggacgaacacgtccctgcccatgaccacccgcgc 526 Query: 383 cacctcgtccaccttcctcctgatctccgccaccaccgtctcctccccgtc---ctcgcc 439 | ||||||||||||||||||||||||| |||||||||| | |||||||| | |||| | Sbjct: 525 cccctcgtccaccttcctcctgatctctgccaccaccgccgcctccccgcctgactcggc 466 Query: 440 cttg---gccaccacgcggcagcagcgccgcgagaag 473 |||| ||||||||||||||||| ||||||| |||| Sbjct: 465 cttgggcgccaccacgcggcagcaccgccgcgggaag 429
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 256 bits (129), Expect = 6e-65 Identities = 196/217 (90%), Gaps = 6/217 (2%) Strand = Plus / Plus Query: 263 gccgtcggcctcgtcgccggtgatctggtcgagcacgaggacgatccccatggcgaaggc 322 |||||||||||||||||||| |||||| |||||||||||||||||| |||||||||| || Sbjct: 32528458 gccgtcggcctcgtcgccggcgatctgatcgagcacgaggacgatcgccatggcgaacgc 32528517 Query: 323 cgcgtcgaagccggcgcccacccgcagcacgaacacgtccctgcccatcaccacccgcgc 382 ||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 32528518 cgcgtcgaacccggcgcccacccgcaggacgaacacgtccctgcccatgaccacccgcgc 32528577 Query: 383 cacctcgtccaccttcctcctgatctccgccaccaccgtctcctccccgtc---ctcgcc 439 | ||||||||||||||||||||||||| |||||||||| | |||||||| | |||| | Sbjct: 32528578 cccctcgtccaccttcctcctgatctctgccaccaccgccgcctccccgcctgactcggc 32528637 Query: 440 cttg---gccaccacgcggcagcagcgccgcgagaag 473 |||| ||||||||||||||||| ||||||| |||| Sbjct: 32528638 cttgggcgccaccacgcggcagcaccgccgcgggaag 32528674 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 264 ccgtcggcctcgtcgccggtgatct 288 |||||||| |||||||||||||||| Sbjct: 7650673 ccgtcggcgtcgtcgccggtgatct 7650649
>dbj|AP003106.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0665A11 Length = 166421 Score = 256 bits (129), Expect = 6e-65 Identities = 196/217 (90%), Gaps = 6/217 (2%) Strand = Plus / Plus Query: 263 gccgtcggcctcgtcgccggtgatctggtcgagcacgaggacgatccccatggcgaaggc 322 |||||||||||||||||||| |||||| |||||||||||||||||| |||||||||| || Sbjct: 115979 gccgtcggcctcgtcgccggcgatctgatcgagcacgaggacgatcgccatggcgaacgc 116038 Query: 323 cgcgtcgaagccggcgcccacccgcagcacgaacacgtccctgcccatcaccacccgcgc 382 ||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 116039 cgcgtcgaacccggcgcccacccgcaggacgaacacgtccctgcccatgaccacccgcgc 116098 Query: 383 cacctcgtccaccttcctcctgatctccgccaccaccgtctcctccccgtc---ctcgcc 439 | ||||||||||||||||||||||||| |||||||||| | |||||||| | |||| | Sbjct: 116099 cccctcgtccaccttcctcctgatctctgccaccaccgccgcctccccgcctgactcggc 116158 Query: 440 cttg---gccaccacgcggcagcagcgccgcgagaag 473 |||| ||||||||||||||||| ||||||| |||| Sbjct: 116159 cttgggcgccaccacgcggcagcaccgccgcgggaag 116195
>dbj|AK069298.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023015J20, full insert sequence Length = 1058 Score = 256 bits (129), Expect = 6e-65 Identities = 196/217 (90%), Gaps = 6/217 (2%) Strand = Plus / Minus Query: 263 gccgtcggcctcgtcgccggtgatctggtcgagcacgaggacgatccccatggcgaaggc 322 |||||||||||||||||||| |||||| |||||||||||||||||| |||||||||| || Sbjct: 714 gccgtcggcctcgtcgccggcgatctgatcgagcacgaggacgatcgccatggcgaacgc 655 Query: 323 cgcgtcgaagccggcgcccacccgcagcacgaacacgtccctgcccatcaccacccgcgc 382 ||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 654 cgcgtcgaacccggcgcccacccgcaggacgaacacgtccctgcccatgaccacccgcgc 595 Query: 383 cacctcgtccaccttcctcctgatctccgccaccaccgtctcctccccgtc---ctcgcc 439 | ||||||||||||||||||||||||| |||||||||| | |||||||| | |||| | Sbjct: 594 cccctcgtccaccttcctcctgatctctgccaccaccgccgcctccccgcctgactcggc 535 Query: 440 cttg---gccaccacgcggcagcagcgccgcgagaag 473 |||| ||||||||||||||||| ||||||| |||| Sbjct: 534 cttgggcgccaccacgcggcagcaccgccgcgggaag 498
>ref|XM_475683.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 714 Score = 153 bits (77), Expect = 6e-34 Identities = 137/157 (87%) Strand = Plus / Minus Query: 272 ctcgtcgccggtgatctggtcgagcacgaggacgatccccatggcgaaggccgcgtcgaa 331 |||||||||||||||| ||||||| ||||| ||||||||||||||||| || |||||||| Sbjct: 663 ctcgtcgccggtgatccggtcgagaacgagcacgatccccatggcgaacgcggcgtcgaa 604 Query: 332 gccggcgcccacccgcagcacgaacacgtccctgcccatcaccacccgcgccacctcgtc 391 ||||||| || || ||||||||||||||| | ||||||||||| |||| ||||||| Sbjct: 603 cccggcgcgcaaccacagcacgaacacgtcgcgccccatcaccacgtgcgcgtcctcgtc 544 Query: 392 caccttcctcctgatctccgccaccaccgtctcctcc 428 ||||||||||| || ||||||||||||| ||||||| Sbjct: 543 caccttcctccggacctccgccaccaccacctcctcc 507 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 443 ggccaccacgcggcagcagcgccgcgagaag 473 ||||||||||||||||||||| |||| |||| Sbjct: 462 ggccaccacgcggcagcagcggcgcgggaag 432
>gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0108E17, complete sequence Length = 139829 Score = 153 bits (77), Expect = 6e-34 Identities = 137/157 (87%) Strand = Plus / Minus Query: 272 ctcgtcgccggtgatctggtcgagcacgaggacgatccccatggcgaaggccgcgtcgaa 331 |||||||||||||||| ||||||| ||||| ||||||||||||||||| || |||||||| Sbjct: 135512 ctcgtcgccggtgatccggtcgagaacgagcacgatccccatggcgaacgcggcgtcgaa 135453 Query: 332 gccggcgcccacccgcagcacgaacacgtccctgcccatcaccacccgcgccacctcgtc 391 ||||||| || || ||||||||||||||| | ||||||||||| |||| ||||||| Sbjct: 135452 cccggcgcgcaaccacagcacgaacacgtcgcgccccatcaccacgtgcgcgtcctcgtc 135393 Query: 392 caccttcctcctgatctccgccaccaccgtctcctcc 428 ||||||||||| || ||||||||||||| ||||||| Sbjct: 135392 caccttcctccggacctccgccaccaccacctcctcc 135356 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 443 ggccaccacgcggcagcagcgccgcgagaag 473 ||||||||||||||||||||| |||| |||| Sbjct: 135311 ggccaccacgcggcagcagcggcgcgggaag 135281
>gb|AC108873.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_B11, complete sequence Length = 162772 Score = 153 bits (77), Expect = 6e-34 Identities = 137/157 (87%) Strand = Plus / Minus Query: 272 ctcgtcgccggtgatctggtcgagcacgaggacgatccccatggcgaaggccgcgtcgaa 331 |||||||||||||||| ||||||| ||||| ||||||||||||||||| || |||||||| Sbjct: 9314 ctcgtcgccggtgatccggtcgagaacgagcacgatccccatggcgaacgcggcgtcgaa 9255 Query: 332 gccggcgcccacccgcagcacgaacacgtccctgcccatcaccacccgcgccacctcgtc 391 ||||||| || || ||||||||||||||| | ||||||||||| |||| ||||||| Sbjct: 9254 cccggcgcgcaaccacagcacgaacacgtcgcgccccatcaccacgtgcgcgtcctcgtc 9195 Query: 392 caccttcctcctgatctccgccaccaccgtctcctcc 428 ||||||||||| || ||||||||||||| ||||||| Sbjct: 9194 caccttcctccggacctccgccaccaccacctcctcc 9158 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 443 ggccaccacgcggcagcagcgccgcgagaag 473 ||||||||||||||||||||| |||| |||| Sbjct: 9113 ggccaccacgcggcagcagcggcgcgggaag 9083
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 153 bits (77), Expect = 6e-34 Identities = 137/157 (87%) Strand = Plus / Minus Query: 272 ctcgtcgccggtgatctggtcgagcacgaggacgatccccatggcgaaggccgcgtcgaa 331 |||||||||||||||| ||||||| ||||| ||||||||||||||||| || |||||||| Sbjct: 25066659 ctcgtcgccggtgatccggtcgagaacgagcacgatccccatggcgaacgcggcgtcgaa 25066600 Query: 332 gccggcgcccacccgcagcacgaacacgtccctgcccatcaccacccgcgccacctcgtc 391 ||||||| || || ||||||||||||||| | ||||||||||| |||| ||||||| Sbjct: 25066599 cccggcgcgcaaccacagcacgaacacgtcgcgccccatcaccacgtgcgcgtcctcgtc 25066540 Query: 392 caccttcctcctgatctccgccaccaccgtctcctcc 428 ||||||||||| || ||||||||||||| ||||||| Sbjct: 25066539 caccttcctccggacctccgccaccaccacctcctcc 25066503 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 443 ggccaccacgcggcagcagcgccgcgagaag 473 ||||||||||||||||||||| |||| |||| Sbjct: 25066458 ggccaccacgcggcagcagcggcgcgggaag 25066428 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 tgatctccgccaccaccgtc 422 |||||||||||||||||||| Sbjct: 17872415 tgatctccgccaccaccgtc 17872434 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 cgtcgccgtcggcctcgtcg 278 |||||||||||||||||||| Sbjct: 3471182 cgtcgccgtcggcctcgtcg 3471201
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 380 cgccacctcgtccaccttcctcctgatctcc 410 |||||||||| |||||||||||| ||||||| Sbjct: 919177 cgccacctcgcccaccttcctccggatctcc 919207
>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome Length = 156487 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 253 cggcgtcgtcgccgtcggcctcgtcgc 279 ||||||||||||||||||| ||||||| Sbjct: 123583 cggcgtcgtcgccgtcggcgtcgtcgc 123609 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 253 cggcgtcgtcgccgtcggcctcgtcgc 279 ||||||||||||||||||| ||||||| Sbjct: 3434 cggcgtcgtcgccgtcggcgtcgtcgc 3408
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 380 cgccacctcgtccaccttcctcctgatctcc 410 |||||||||| |||||||||||| ||||||| Sbjct: 593874 cgccacctcgcccaccttcctccggatctcc 593904
>ref|XM_468469.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4017 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 253 cggcgtcgtcgccgtcggcctcgtcg 278 ||||||||||||||||||| |||||| Sbjct: 201 cggcgtcgtcgccgtcggcttcgtcg 226
>ref|XM_754630.1| Ustilago maydis 521 hypothetical protein (UM03576.1) partial mRNA Length = 3783 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 253 cggcgtcgtcgccgtcggcctcgtcg 278 |||||| ||||||||||||||||||| Sbjct: 1615 cggcgtggtcgccgtcggcctcgtcg 1590
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 236 gtggacgggatcctgtgcggcg 257 |||||||||||||||||||||| Sbjct: 888733 gtggacgggatcctgtgcggcg 888712 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 277 cgccggtgatctggtcgagcacga 300 |||||||||||||||||| ||||| Sbjct: 1758789 cgccggtgatctggtcgatcacga 1758812
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29 Length = 308050 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 261 tcgccgtcggcctcgtcgccgg 282 |||||||||||||||||||||| Sbjct: 105923 tcgccgtcggcctcgtcgccgg 105944
>emb|BX571803.23| Zebrafish DNA sequence from clone DKEY-273G3 in linkage group 9, complete sequence Length = 241708 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 24 ttattattcttagcagagtttt 45 |||||||||||||||||||||| Sbjct: 174505 ttattattcttagcagagtttt 174526
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 253 cggcgtcgtcgccgtcggcctc 274 |||||||||||||||||||||| Sbjct: 5323966 cggcgtcgtcgccgtcggcctc 5323987
>ref|XM_393924.2| PREDICTED: Apis mellifera similar to CG31670-PA (LOC410444), mRNA Length = 2193 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 252 gcggcgtcgtcgccgtcggcctcgtcgccg 281 |||||||||||||||||| | ||||||||| Sbjct: 343 gcggcgtcgtcgccgtcgtcgtcgtcgccg 314
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 253 cggcgtcgtcgccgtcggcctcgtcg 278 ||||||||||||||||||| |||||| Sbjct: 35398070 cggcgtcgtcgccgtcggcttcgtcg 35398095
>dbj|AP003989.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1063_D06 Length = 102439 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 253 cggcgtcgtcgccgtcggcctcgtcg 278 ||||||||||||||||||| |||||| Sbjct: 9591 cggcgtcgtcgccgtcggcttcgtcg 9616
>dbj|AP004026.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C04 Length = 103194 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 253 cggcgtcgtcgccgtcggcctcgtcg 278 ||||||||||||||||||| |||||| Sbjct: 58618 cggcgtcgtcgccgtcggcttcgtcg 58643
>dbj|AK120318.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013056G01, full insert sequence Length = 4017 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 253 cggcgtcgtcgccgtcggcctcgtcg 278 ||||||||||||||||||| |||||| Sbjct: 201 cggcgtcgtcgccgtcggcttcgtcg 226
>gb|AF079138.1|AF079138 Streptomyces venezuelae methymycin/pikromycin polyketide synthase gene cluster, complete sequence Length = 37948 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 317 gaaggccgcgtcgaagccggcg 338 |||||||||||||||||||||| Sbjct: 6463 gaaggccgcgtcgaagccggcg 6442
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 429 ccgtcctcgcccttggccacca 450 |||||||||||||||||||||| Sbjct: 713776 ccgtcctcgcccttggccacca 713797
>gb|DQ314871.1| Homo sapiens heat shock 90kDa protein 1, alpha (HSPCA) gene, complete cds Length = 61834 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 191 ggctaaaccaagaaagaagcaa 212 |||||||||||||||||||||| Sbjct: 34163 ggctaaaccaagaaagaagcaa 34184
>emb|AL928928.4| Zebrafish DNA sequence from clone CH211-127C19, complete sequence Length = 163161 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 24 ttattattcttagcagagtttt 45 |||||||||||||||||||||| Sbjct: 124142 ttattattcttagcagagtttt 124121
>emb|AL133223.5|CNS01DU8 Human chromosome 14 DNA sequence BAC R-114H15 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 140292 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 191 ggctaaaccaagaaagaagcaa 212 |||||||||||||||||||||| Sbjct: 73240 ggctaaaccaagaaagaagcaa 73261
>ref|NM_188688.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 444 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 264 ccgtcggcctcgtcgccggtgatct 288 |||||||| |||||||||||||||| Sbjct: 125 ccgtcggcgtcgtcgccggtgatct 101
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 310 ccatggcgaaggccgcgtcga 330 ||||||||||||||||||||| Sbjct: 2169786 ccatggcgaaggccgcgtcga 2169806
>ref|XM_804340.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053509859.60) partial mRNA Length = 3882 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 407 ctccgccaccaccgtctcctccccg 431 |||| |||||||||||||||||||| Sbjct: 3813 ctcctccaccaccgtctcctccccg 3789
>ref|XM_843884.1| PREDICTED: Canis familiaris similar to nucleoporin 88kDa (LOC607268), mRNA Length = 1380 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 253 cggcgtcgtcgccgtcggcctcgtcgccg 281 ||||||| ||||||||| ||||||||||| Sbjct: 125 cggcgtcttcgccgtcgccctcgtcgccg 153
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 276 tcgccggtgatctggtcgagc 296 ||||||||||||||||||||| Sbjct: 824206 tcgccggtgatctggtcgagc 824186 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 cggcgcccacccgcagcacg 353 |||||||||||||||||||| Sbjct: 3067934 cggcgcccacccgcagcacg 3067953
>ref|XM_780432.1| PREDICTED: Strongylocentrotus purpuratus similar to Large neutral amino acids transporter small subunit 2 (L-type amino acid transporter 2) (LOC580370), mRNA Length = 2782 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 276 tcgccggtgatctggtcgagc 296 ||||||||||||||||||||| Sbjct: 915 tcgccggtgatctggtcgagc 895
>gb|CP000137.1| Rhizobium etli CFN 42 plasmid p42e, complete sequence Length = 505334 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 cgtcgccgtcggcctcgtcgccggt 283 ||||||| ||||||||||||||||| Sbjct: 112227 cgtcgccctcggcctcgtcgccggt 112251
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 436 cgcccttggccaccacgcggc 456 ||||||||||||||||||||| Sbjct: 823977 cgcccttggccaccacgcggc 823957
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 256 cgtcgtcgccgtcggcctcgtcgcc 280 |||||||||||||||| |||||||| Sbjct: 2635225 cgtcgtcgccgtcggcatcgtcgcc 2635249
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 313 tggcgaaggccgcgtcgaagccggc 337 |||||||||||||| |||||||||| Sbjct: 3084987 tggcgaaggccgcggcgaagccggc 3085011
>dbj|AP002855.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0086P08 Length = 145312 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 264 ccgtcggcctcgtcgccggtgatct 288 |||||||| |||||||||||||||| Sbjct: 61249 ccgtcggcgtcgtcgccggtgatct 61225
>dbj|AP001458.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-831H9, complete sequence Length = 177433 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 412 ccaccaccgtctcctccccgt 432 ||||||||||||||||||||| Sbjct: 41999 ccaccaccgtctcctccccgt 42019
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 ccatcaccacccgcgccacc 386 |||||||||||||||||||| Sbjct: 1538961 ccatcaccacccgcgccacc 1538980
>ref|NM_117756.3| Arabidopsis thaliana pepsin A AT4G16563 mRNA, complete cds Length = 1867 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 ctccgccaccaccgtctcct 426 |||||||||||||||||||| Sbjct: 493 ctccgccaccaccgtctcct 512
>ref|XM_475629.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1221 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 cgtcgccgtcggcctcgtcg 278 |||||||||||||||||||| Sbjct: 29 cgtcgccgtcggcctcgtcg 48
>ref|XM_478362.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1071 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 ccgccaccaccgtctcctcc 428 |||||||||||||||||||| Sbjct: 542 ccgccaccaccgtctcctcc 523
>gb|AC119288.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017J22, complete sequence Length = 177153 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 cgtcgccgtcggcctcgtcg 278 |||||||||||||||||||| Sbjct: 100664 cgtcgccgtcggcctcgtcg 100683
>gb|AY548484.1| Frog virus 3, complete genome Length = 105903 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 235 cgtggacgggatcctgtgcggcgt 258 |||||||||| ||||||||||||| Sbjct: 72669 cgtggacggggtcctgtgcggcgt 72646
>gb|AY017912.1| Oryza sativa microsatellite MRG0237 containing (AG)X15, genomic sequence Length = 230 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 tgatctccgccaccaccgtc 422 |||||||||||||||||||| Sbjct: 91 tgatctccgccaccaccgtc 72
>gb|AC137614.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0034O12, complete sequence Length = 156263 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 cgtcgccgtcggcctcgtcg 278 |||||||||||||||||||| Sbjct: 36813 cgtcgccgtcggcctcgtcg 36832
>gb|AY661659.1| Sorghum bicolor clone BAC 75D9, complete sequence Length = 204120 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 ccgccaccaccgtctcctcc 428 |||||||||||||||||||| Sbjct: 179927 ccgccaccaccgtctcctcc 179908
>gb|AY505177.1| Pseudomonas stutzeri isolate WM88 operon phn, complete sequence Length = 10577 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 cgtcgtcgccgtcggcctcg 275 |||||||||||||||||||| Sbjct: 2339 cgtcgtcgccgtcggcctcg 2358
>gb|AC119289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0025P09, complete sequence Length = 167318 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 tgatctccgccaccaccgtc 422 |||||||||||||||||||| Sbjct: 132369 tgatctccgccaccaccgtc 132388
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 cgcggcagcagcgccgcgag 470 |||||||||||||||||||| Sbjct: 2552522 cgcggcagcagcgccgcgag 2552503 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 451 cgcggcagcagcgccgcgag 470 |||||||||||||||||||| Sbjct: 526124 cgcggcagcagcgccgcgag 526143
>gb|AY450580.1| Calicium tricolor 18S small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 535 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 gccgtcggcctcgtcgccgg 282 |||||||||||||||||||| Sbjct: 73 gccgtcggcctcgtcgccgg 92
>gb|AC108874.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_E12, complete sequence Length = 121293 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 tgatctccgccaccaccgtc 422 |||||||||||||||||||| Sbjct: 3164 tgatctccgccaccaccgtc 3183
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 440 cttggccaccacgcggcagc 459 |||||||||||||||||||| Sbjct: 23406111 cttggccaccacgcggcagc 23406130
>ref|XM_745638.1| Aspergillus fumigatus Af293 ubiquitin-protein ligase E3 component UBR1 (Afu6g08420) partial mRNA Length = 6453 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 tcctcctgatctccgccacc 416 |||||||||||||||||||| Sbjct: 686 tcctcctgatctccgccacc 667
>ref|XM_807831.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510515.80) partial mRNA Length = 3879 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 407 ctccgccaccaccgtctcctcccc 430 |||| ||||||||||||||||||| Sbjct: 3810 ctcctccaccaccgtctcctcccc 3787
>gb|AC123534.3| Mus musculus BAC clone RP23-356I5 from chromosome 14, complete sequence Length = 205222 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 aagaaaagcggggagaaaat 171 |||||||||||||||||||| Sbjct: 46533 aagaaaagcggggagaaaat 46514
>gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0007P22, complete sequence Length = 148068 Score = 40.1 bits (20), Expect = 6.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 252 gcggcgtcgtcgccgtcggcctcgtcgccggtgatc 287 |||||||||||| |||||| ||||||||| ||||| Sbjct: 15605 gcggcgtcgtcggcgtcggagtcgtcgccgctgatc 15570
>gb|AC104276.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1231_F08, complete sequence Length = 118049 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 cgtcgccgtcggcctcgtcg 278 |||||||||||||||||||| Sbjct: 38464 cgtcgccgtcggcctcgtcg 38483
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 tcgtcgccggtgatctggtc 292 |||||||||||||||||||| Sbjct: 2091303 tcgtcgccggtgatctggtc 2091322
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 315 gcgaaggccgcgtcgaagccggcg 338 ||||||||||| |||||||||||| Sbjct: 4144924 gcgaaggccgcttcgaagccggcg 4144901
>emb|Z97341.2|ATFCA6 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 6 Length = 213788 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 ctccgccaccaccgtctcct 426 |||||||||||||||||||| Sbjct: 95532 ctccgccaccaccgtctcct 95513
>emb|Z18946.1|MLCGA Mycobacteriophage L5 complete genome Length = 52297 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 cggcgtcgtcgccgtcggcc 272 |||||||||||||||||||| Sbjct: 37938 cggcgtcgtcgccgtcggcc 37957
>emb|BX572603.1| Rhodopseudomonas palustris CGA009 complete genome; segment 11/16 Length = 349635 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 280 cggtgatctggtcgagcacgaggacgat 307 ||||||||||||||||||| || ||||| Sbjct: 317852 cggtgatctggtcgagcaccagcacgat 317825
>emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genome; segment 10/16 Length = 349981 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 gccgcgtcgaagccggcgcc 340 |||||||||||||||||||| Sbjct: 178886 gccgcgtcgaagccggcgcc 178905
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 451 cgcggcagcagcgccgcgag 470 |||||||||||||||||||| Sbjct: 1845378 cgcggcagcagcgccgcgag 1845397 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 cgcggcagcagcgccgcgag 470 |||||||||||||||||||| Sbjct: 732555 cgcggcagcagcgccgcgag 732536
>emb|AL161544.2|ATCHRIV44 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 44 Length = 198735 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 ctccgccaccaccgtctcct 426 |||||||||||||||||||| Sbjct: 73460 ctccgccaccaccgtctcct 73441
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 280 cggtgatctggtcgagcacgagga 303 |||||||| ||||||||||||||| Sbjct: 3574212 cggtgatcgggtcgagcacgagga 3574189
>emb|AJ809510.1| Halobaculum gomorrense partial rpoB gene for RNA polymerase B subunit, strain ATCC 700876 Length = 1305 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 266 gtcggcctcgtcgccggtgatctggtcg 293 |||| ||||||||||||||||| ||||| Sbjct: 1284 gtcgtcctcgtcgccggtgatcgggtcg 1257
>gb|AC023916.10| Homo sapiens chromosome , clone RP11-12L20, complete sequence Length = 132446 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 151 gaagaaaagcggggagaaaataag 174 |||||||||| ||||||||||||| Sbjct: 19008 gaagaaaagcagggagaaaataag 19031
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 280 cggtgatctggtcgagcacgaggacgat 307 ||||||||||||||||||| || ||||| Sbjct: 4049730 cggtgatctggtcgagcaccagcacgat 4049703
>gb|AE005724.1| Caulobacter crescentus CB15 section 50 of 359 of the complete genome Length = 12114 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 314 ggcgaaggccgcgtcgaagccggcgccc 341 ||||||| ||||||||||| |||||||| Sbjct: 5354 ggcgaagaccgcgtcgaagtcggcgccc 5327
>gb|AY074554.1| Arabidopsis thaliana AT4g16560/dl4305c mRNA, complete cds Length = 1500 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 ctccgccaccaccgtctcct 426 |||||||||||||||||||| Sbjct: 402 ctccgccaccaccgtctcct 421
>gb|AY054167.1| Arabidopsis thaliana AT4g16560/dl4305c mRNA, complete cds Length = 1813 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 ctccgccaccaccgtctcct 426 |||||||||||||||||||| Sbjct: 441 ctccgccaccaccgtctcct 460
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 280 cggtgatctggtcgagcacgaggacgat 307 ||||||||||||||||||| || ||||| Sbjct: 2495486 cggtgatctggtcgagcaccagcacgat 2495513
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 cgcggcagcagcgccgcgag 470 |||||||||||||||||||| Sbjct: 938494 cgcggcagcagcgccgcgag 938475 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 cgcggcagcagcgccgcgag 470 |||||||||||||||||||| Sbjct: 463437 cgcggcagcagcgccgcgag 463418
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 252 gcggcgtcgtcgccgtcggcctcgtcgccggtgatc 287 |||||||||||| |||||| ||||||||| ||||| Sbjct: 22437211 gcggcgtcgtcggcgtcggagtcgtcgccgctgatc 22437246
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 ccaccaccgtctcctccccg 431 |||||||||||||||||||| Sbjct: 29201091 ccaccaccgtctcctccccg 29201110 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 378 cgcgccacctcgtccaccttcctc 401 ||||| |||||||||||||||||| Sbjct: 22905077 cgcgcaacctcgtccaccttcctc 22905100 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 ccgccaccaccgtctcctcc 428 |||||||||||||||||||| Sbjct: 19480138 ccgccaccaccgtctcctcc 19480119
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 cgtcgtcgccgtcggcctcg 275 |||||||||||||||||||| Sbjct: 11398630 cgtcgtcgccgtcggcctcg 11398649
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 440 cttggccaccacgcggcagc 459 |||||||||||||||||||| Sbjct: 23399139 cttggccaccacgcggcagc 23399158
>emb|BX826940.1|CNS0A42B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB78ZE09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1737 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 ctccgccaccaccgtctcct 426 |||||||||||||||||||| Sbjct: 428 ctccgccaccaccgtctcct 447
>emb|BX826726.1|CNS0A47S Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB58ZC06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1763 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 ctccgccaccaccgtctcct 426 |||||||||||||||||||| Sbjct: 428 ctccgccaccaccgtctcct 447
>emb|BX826604.1|CNS0A44N Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB46ZD11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1801 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 ctccgccaccaccgtctcct 426 |||||||||||||||||||| Sbjct: 493 ctccgccaccaccgtctcct 512
>emb|BX842535.1|CNS0ADQR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB2ZF06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1730 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 ctccgccaccaccgtctcct 426 |||||||||||||||||||| Sbjct: 422 ctccgccaccaccgtctcct 441
>gb|AC097280.8| Oryza sativa chromosome 3 BAC OSJNBb0111B07 genomic sequence, complete sequence Length = 129647 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 440 cttggccaccacgcggcagc 459 |||||||||||||||||||| Sbjct: 88767 cttggccaccacgcggcagc 88786
>gb|AC116317.4| Homo sapiens BAC clone RP11-1406H17 from 4, complete sequence Length = 160943 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 gccaccacgcggcagcagcg 463 |||||||||||||||||||| Sbjct: 88326 gccaccacgcggcagcagcg 88345
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 cgaaggccgcgtcgaagccg 335 |||||||||||||||||||| Sbjct: 2756952 cgaaggccgcgtcgaagccg 2756971
>gb|AC006063.1|AC006063 Homo sapiens 12p13.3 PAC RP3-377H17 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 150001 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 taaaccaagaaagaagcaac 213 |||||||||||||||||||| Sbjct: 122427 taaaccaagaaagaagcaac 122446
>dbj|AP003816.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1165_F02 Length = 125993 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 ccaccaccgtctcctccccg 431 |||||||||||||||||||| Sbjct: 41165 ccaccaccgtctcctccccg 41184
>dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1386G10 Length = 121827 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 cgtcgtcgccgtcggcctcg 275 |||||||||||||||||||| Sbjct: 86339 cgtcgtcgccgtcggcctcg 86358
>dbj|AP005196.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0580A11 Length = 174673 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 ccgccaccaccgtctcctcc 428 |||||||||||||||||||| Sbjct: 23482 ccgccaccaccgtctcctcc 23463
>dbj|AP003981.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1019_E02 Length = 121607 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 378 cgcgccacctcgtccaccttcctc 401 ||||| |||||||||||||||||| Sbjct: 98344 cgcgcaacctcgtccaccttcctc 98367
>gb|AE005095.1| Halobacterium sp. NRC-1 section 126 of 170 of the complete genome Length = 9920 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 cgtcggcctcgtcgccggtg 284 |||||||||||||||||||| Sbjct: 9175 cgtcggcctcgtcgccggtg 9156
>dbj|AP002029.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F24C7 Length = 73663 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 tctccgccaccaccgtctcc 425 |||||||||||||||||||| Sbjct: 38135 tctccgccaccaccgtctcc 38154
>dbj|AB025605.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F5H8 Length = 70098 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 tctccgccaccaccgtctcc 425 |||||||||||||||||||| Sbjct: 6874 tctccgccaccaccgtctcc 6893
>ref|XM_320569.2| Anopheles gambiae str. PEST ENSANGP00000015372 (ENSANGG00000012883), partial mRNA Length = 1728 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 cccgcagcacgaacacgtcc 362 |||||||||||||||||||| Sbjct: 100 cccgcagcacgaacacgtcc 81
>ref|XM_308229.2| Anopheles gambiae str. PEST ENSANGP00000020719 (ENSANGG00000018230), partial mRNA Length = 4215 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 tcaccacccgcgccacctcg 389 |||||||||||||||||||| Sbjct: 3698 tcaccacccgcgccacctcg 3679
>dbj|AK102376.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091P05, full insert sequence Length = 1391 Score = 40.1 bits (20), Expect = 6.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 252 gcggcgtcgtcgccgtcggcctcgtcgccggtgatc 287 |||||||||||| |||||| ||||||||| ||||| Sbjct: 195 gcggcgtcgtcggcgtcggagtcgtcgccgctgatc 230
>dbj|AK073554.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044H19, full insert sequence Length = 1505 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 cgtcgccgtcggcctcgtcg 278 |||||||||||||||||||| Sbjct: 111 cgtcgccgtcggcctcgtcg 130
>dbj|AK061397.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-E09, full insert sequence Length = 1294 Score = 40.1 bits (20), Expect = 6.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 252 gcggcgtcgtcgccgtcggcctcgtcgccggtgatc 287 |||||||||||| |||||| ||||||||| ||||| Sbjct: 137 gcggcgtcgtcggcgtcggagtcgtcgccgctgatc 172
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 ggccgcgtcgaagccggcgc 339 |||||||||||||||||||| Sbjct: 481793 ggccgcgtcgaagccggcgc 481774
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 252 gcggcgtcgtcgccgtcggcctcgtcgccggtgatc 287 |||||||||||| |||||| ||||||||| ||||| Sbjct: 22747122 gcggcgtcgtcggcgtcggagtcgtcgccgctgatc 22747157
>gb|AF389451.1| Tiger frog virus, complete genome Length = 105057 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 235 cgtggacgggatcctgtgcggcgt 258 |||||||||| ||||||||||||| Sbjct: 71099 cgtggacggggtcctgtgcggcgt 71076
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 gtcgccggtgatctggtcga 294 |||||||||||||||||||| Sbjct: 801158 gtcgccggtgatctggtcga 801177
>gb|AC155339.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH015H17, complete sequence Length = 110885 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 414 accaccgtctcctccccgtcctcgccct 441 ||||||||||||||||| ||||| |||| Sbjct: 3050 accaccgtctcctccccctcctccccct 3023
>gb|AC155335.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH001H24, complete sequence Length = 118144 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 414 accaccgtctcctccccgtcctcgccct 441 ||||||||||||||||| ||||| |||| Sbjct: 89201 accaccgtctcctccccctcctccccct 89174
>emb|AL844556.4| Mouse DNA sequence from clone RP23-21N12 on chromosome 2, complete sequence Length = 178656 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 cagggacacgagcacacaca 149 |||||||||||||||||||| Sbjct: 107944 cagggacacgagcacacaca 107925
>emb|AJ315596.1|BNA315596 Brassica napus microsatellite, clone Na10-B10 Length = 509 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 397 tcctcctgatctccgccaccaccgtctcctcc 428 ||||||| ||||| ||||||||||||||||| Sbjct: 236 tcctcctcctctcctccaccaccgtctcctcc 205 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,969,195 Number of Sequences: 3902068 Number of extensions: 3969195 Number of successful extensions: 96513 Number of sequences better than 10.0: 108 Number of HSP's better than 10.0 without gapping: 113 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 92359 Number of HSP's gapped (non-prelim): 4154 length of query: 473 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 451 effective length of database: 17,147,199,772 effective search space: 7733387097172 effective search space used: 7733387097172 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
