ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart26g01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_187463.1| Oryza sativa (japonica cultivar-group), predic... 153 6e-34
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 153 6e-34
3gb|AC135208.3| Oryza sativa (japonica cultivar-group) chromosome... 153 6e-34
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 153 6e-34
5dbj|AK058507.1| Oryza sativa (japonica cultivar-group) cDNA clon... 153 6e-34
6gb|AY103686.1| Zea mays PCO076793 mRNA sequence 123 5e-25
7ref|NM_001035793.1| Arabidopsis thaliana zinc ion binding AT3G55... 78 3e-11
8ref|NM_148878.2| Arabidopsis thaliana zinc ion binding AT3G55770... 78 3e-11
9ref|NM_001035791.1| Arabidopsis thaliana zinc ion binding AT3G55... 78 3e-11
10ref|NM_001035792.1| Arabidopsis thaliana zinc ion binding AT3G55... 78 3e-11
11ref|NM_115435.3| Arabidopsis thaliana zinc ion binding AT3G55770... 78 3e-11
12ref|XM_466988.1| Oryza sativa (japonica cultivar-group), mRNA 78 3e-11
13gb|AY091249.1| Arabidopsis thaliana putative transcription facto... 78 3e-11
14gb|AY063924.1| Arabidopsis thaliana putative transcription facto... 78 3e-11
15emb|AL161667.1|ATF1I16 Arabidopsis thaliana DNA chromosome 3, BA... 78 3e-11
16gb|AF370574.1|AF370574 Arabidopsis thaliana transcription factor... 78 3e-11
17dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 78 3e-11
18emb|BX822878.1|CNS0A5VL Arabidopsis thaliana Full-length cDNA Co... 78 3e-11
19emb|BX824310.1|CNS0A5HL Arabidopsis thaliana Full-length cDNA Co... 78 3e-11
20gb|AY084361.1| Arabidopsis thaliana clone 105441 mRNA, complete ... 78 3e-11
21dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic D... 78 3e-11
22dbj|AP004133.3| Oryza sativa (japonica cultivar-group) genomic D... 78 3e-11
23dbj|AP006402.1| Lotus japonicus genomic DNA, chromosome 1, clone... 72 2e-09
24ref|NM_129548.2| Arabidopsis thaliana zinc ion binding AT2G39900... 68 3e-08
25gb|AY122901.1| Arabidopsis thaliana At2g39900/T28M21.6 mRNA, com... 68 3e-08
26gb|AY094448.1| Arabidopsis thaliana At2g39900/T28M21.6 mRNA, com... 68 3e-08
27gb|AF002109.3| Arabidopsis thaliana chromosome 2 clone T28M21 ma... 68 3e-08
28emb|BX842053.1|CNS09Y9O Arabidopsis thaliana Full-length cDNA Co... 68 3e-08
29emb|Y11002.1|NTLIMDOM N.tabacum mRNA for LIM-domain protein 64 4e-07
30gb|AF184886.1|AF184886 Nicotiana tabacum LIM domain protein WLIM... 64 4e-07
31emb|X91398.1|ATRNAATL2 A.thaliana mRNA for transcription factor L2 62 2e-06
32emb|BX842219.1|CNS09YBU Arabidopsis thaliana Full-length cDNA Co... 62 2e-06
33emb|BX842049.1|CNS09Y98 Arabidopsis thaliana Full-length cDNA Co... 58 2e-05
34emb|BX822901.1|CNS0A5ZC Arabidopsis thaliana Full-length cDNA Co... 50 0.006
35gb|AF116851.1|AF116851 Nicotiana tabacum LIM domain protein PLIM... 50 0.006
36gb|AF443117.1|AF443117 Gossypium hirsutum LIM domain protein (LI... 48 0.024
37gb|AY109812.1| Zea mays CL4474_1 mRNA sequence 48 0.024
38gb|AC149594.2| Xenopus tropicalis chromosome CH216-62P2, complet... 42 1.5
39dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
40dbj|AP003233.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
41dbj|AP002909.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
42gb|AC084386.2| Mus musculus BAC clone RP23-61O2 from 17, complet... 40 5.8
43gb|AC006404.25| Mus musculus strain 129/Sv clone ct7-141k23 map ... 40 5.8
44emb|AL663115.11| Mouse DNA sequence from clone RP23-452C23 on ch... 40 5.8
45dbj|AB072914.1| Expression vector pMFXU4 DNA, complete sequence 40 5.8
46gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome 40 5.8
47gb|AC155636.3| Mus musculus BAC clone RP23-345F5 from chromosome... 40 5.8
48emb|CT030184.14| Mouse DNA sequence from clone RP23-9C19 on chro... 40 5.8
49gb|AC131029.6| Mus musculus chromosome 14, clone RP23-304N24, co... 40 5.8
50gb|AC103404.13| Mus musculus chromosome 5, clone RP23-21O1, comp... 40 5.8
51dbj|D85624.1|CNASA Citrullus lanatus serine acetyltransferase (S... 40 5.8
52emb|CT030187.6| Mouse DNA sequence from clone RP23-38L5 on chrom... 40 5.8
53emb|AL929576.7| Zebrafish DNA sequence from clone CH211-188M17, ... 40 5.8
54gb|AC083894.21| Mus musculus strain C57BL/6J chromosome 6 clone ... 40 5.8
55gb|M86236.1|YSAURAIII Candida boidinii orotidine-5'-phosphate de... 40 5.8
56dbj|AB006530.1| Citrullus lanatus Sat gene for serine acetyltran... 40 5.8 
>ref|NM_187463.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 591

 Score =  153 bits (77), Expect = 6e-34
 Identities = 104/113 (92%)
 Strand = Plus / Minus

                                                                       
Query: 319 gcgcgcttgaccgatgcgcacttgatcagatggttgtagctccccttctccttgaaaagc 378
           ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||| 
Sbjct: 545 gcgcgcttgactgatgcgcatttgatcagatggttgtagctccctttctccttgaaaagt 486

                                                                
Query: 379 tgtgagaaatggtgcttgcagtagaggatgccttccaaagccgcgtaattgga 431
           || |||||||||||||||||||| ||||| ||||||||||| || ||||||||
Sbjct: 485 tgggagaaatggtgcttgcagtataggataccttccaaagctgcataattgga 433
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  153 bits (77), Expect = 6e-34
 Identities = 104/113 (92%)
 Strand = Plus / Minus

                                                                           
Query: 319     gcgcgcttgaccgatgcgcacttgatcagatggttgtagctccccttctccttgaaaagc 378
               ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||| 
Sbjct: 8771814 gcgcgcttgactgatgcgcatttgatcagatggttgtagctccctttctccttgaaaagt 8771755

                                                                    
Query: 379     tgtgagaaatggtgcttgcagtagaggatgccttccaaagccgcgtaattgga 431
               || |||||||||||||||||||| ||||| ||||||||||| || ||||||||
Sbjct: 8771754 tgggagaaatggtgcttgcagtataggataccttccaaagctgcataattgga 8771702



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 130     acgaaattgataggtcctggtatcc 154
               ||||||||||||||||| |||||||
Sbjct: 8771973 acgaaattgataggtcccggtatcc 8771949
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>gb|AC135208.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1364E02,
             complete sequence
          Length = 112265

 Score =  153 bits (77), Expect = 6e-34
 Identities = 104/113 (92%)
 Strand = Plus / Minus

                                                                         
Query: 319   gcgcgcttgaccgatgcgcacttgatcagatggttgtagctccccttctccttgaaaagc 378
             ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||| 
Sbjct: 14967 gcgcgcttgactgatgcgcatttgatcagatggttgtagctccctttctccttgaaaagt 14908

                                                                  
Query: 379   tgtgagaaatggtgcttgcagtagaggatgccttccaaagccgcgtaattgga 431
             || |||||||||||||||||||| ||||| ||||||||||| || ||||||||
Sbjct: 14907 tgggagaaatggtgcttgcagtataggataccttccaaagctgcataattgga 14855



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 130   acgaaattgataggtcctggtatcc 154
             ||||||||||||||||| |||||||
Sbjct: 15126 acgaaattgataggtcccggtatcc 15102
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  153 bits (77), Expect = 6e-34
 Identities = 104/113 (92%)
 Strand = Plus / Minus

                                                                           
Query: 319     gcgcgcttgaccgatgcgcacttgatcagatggttgtagctccccttctccttgaaaagc 378
               ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||| 
Sbjct: 8769649 gcgcgcttgactgatgcgcatttgatcagatggttgtagctccctttctccttgaaaagt 8769590

                                                                    
Query: 379     tgtgagaaatggtgcttgcagtagaggatgccttccaaagccgcgtaattgga 431
               || |||||||||||||||||||| ||||| ||||||||||| || ||||||||
Sbjct: 8769589 tgggagaaatggtgcttgcagtataggataccttccaaagctgcataattgga 8769537



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 130     acgaaattgataggtcctggtatcc 154
               ||||||||||||||||| |||||||
Sbjct: 8769808 acgaaattgataggtcccggtatcc 8769784
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>dbj|AK058507.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-G03, full
           insert sequence
          Length = 962

 Score =  153 bits (77), Expect = 6e-34
 Identities = 104/113 (92%)
 Strand = Plus / Minus

                                                                       
Query: 319 gcgcgcttgaccgatgcgcacttgatcagatggttgtagctccccttctccttgaaaagc 378
           ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||| 
Sbjct: 721 gcgcgcttgactgatgcgcatttgatcagatggttgtagctccctttctccttgaaaagt 662

                                                                
Query: 379 tgtgagaaatggtgcttgcagtagaggatgccttccaaagccgcgtaattgga 431
           || |||||||||||||||||||| ||||| ||||||||||| || ||||||||
Sbjct: 661 tgggagaaatggtgcttgcagtataggataccttccaaagctgcataattgga 609



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 130 acgaaattgataggtcctggtatcc 154
           ||||||||||||||||| |||||||
Sbjct: 880 acgaaattgataggtcccggtatcc 856
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>gb|AY103686.1| Zea mays PCO076793 mRNA sequence
          Length = 1188

 Score =  123 bits (62), Expect = 5e-25
 Identities = 89/98 (90%)
 Strand = Plus / Minus

                                                                       
Query: 319 gcgcgcttgaccgatgcgcacttgatcagatggttgtagctccccttctccttgaaaagc 378
           ||||||||||| || |||||||||||||  ||||||||||| ||||||||||||||||| 
Sbjct: 814 gcgcgcttgacggacgcgcacttgatcaagtggttgtagcttcccttctccttgaaaagt 755

                                                 
Query: 379 tgtgagaaatggtgcttgcagtagaggatgccttccaa 416
           || ||||||||||| ||||||||||||||||| |||||
Sbjct: 754 tgggagaaatggtgtttgcagtagaggatgccctccaa 717
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>ref|NM_001035793.1| Arabidopsis thaliana zinc ion binding AT3G55770 transcript variant
           AT3G55770.5 mRNA, complete cds
          Length = 1046

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                       
Query: 349 tggttgtagctccccttctccttgaaaagctgtgagaaatggtgcttgcagtagaggatg 408
           |||||||| || |||||||||||||| ||||| | |||||||||||||||||| ||||| 
Sbjct: 756 tggttgtaacttcccttctccttgaagagctgagcgaaatggtgcttgcagtacaggatt 697

                                  
Query: 409 ccttccaaagccgcgtaattgga 431
           ||||| | ||| ||||| |||||
Sbjct: 696 ccttcaagagctgcgtagttgga 674
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>ref|NM_148878.2| Arabidopsis thaliana zinc ion binding AT3G55770 transcript variant
           AT3G55770.2 mRNA, complete cds
          Length = 943

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                       
Query: 349 tggttgtagctccccttctccttgaaaagctgtgagaaatggtgcttgcagtagaggatg 408
           |||||||| || |||||||||||||| ||||| | |||||||||||||||||| ||||| 
Sbjct: 653 tggttgtaacttcccttctccttgaagagctgagcgaaatggtgcttgcagtacaggatt 594

                                  
Query: 409 ccttccaaagccgcgtaattgga 431
           ||||| | ||| ||||| |||||
Sbjct: 593 ccttcaagagctgcgtagttgga 571
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>ref|NM_001035791.1| Arabidopsis thaliana zinc ion binding AT3G55770 transcript variant
           AT3G55770.3 mRNA, complete cds
          Length = 1042

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                       
Query: 349 tggttgtagctccccttctccttgaaaagctgtgagaaatggtgcttgcagtagaggatg 408
           |||||||| || |||||||||||||| ||||| | |||||||||||||||||| ||||| 
Sbjct: 752 tggttgtaacttcccttctccttgaagagctgagcgaaatggtgcttgcagtacaggatt 693

                                  
Query: 409 ccttccaaagccgcgtaattgga 431
           ||||| | ||| ||||| |||||
Sbjct: 692 ccttcaagagctgcgtagttgga 670
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>ref|NM_001035792.1| Arabidopsis thaliana zinc ion binding AT3G55770 transcript variant
           AT3G55770.4 mRNA, complete cds
          Length = 1030

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                       
Query: 349 tggttgtagctccccttctccttgaaaagctgtgagaaatggtgcttgcagtagaggatg 408
           |||||||| || |||||||||||||| ||||| | |||||||||||||||||| ||||| 
Sbjct: 740 tggttgtaacttcccttctccttgaagagctgagcgaaatggtgcttgcagtacaggatt 681

                                  
Query: 409 ccttccaaagccgcgtaattgga 431
           ||||| | ||| ||||| |||||
Sbjct: 680 ccttcaagagctgcgtagttgga 658
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>ref|NM_115435.3| Arabidopsis thaliana zinc ion binding AT3G55770 transcript variant
           AT3G55770.1 mRNA, complete cds
          Length = 1010

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                       
Query: 349 tggttgtagctccccttctccttgaaaagctgtgagaaatggtgcttgcagtagaggatg 408
           |||||||| || |||||||||||||| ||||| | |||||||||||||||||| ||||| 
Sbjct: 721 tggttgtaacttcccttctccttgaagagctgagcgaaatggtgcttgcagtacaggatt 662

                                  
Query: 409 ccttccaaagccgcgtaattgga 431
           ||||| | ||| ||||| |||||
Sbjct: 661 ccttcaagagctgcgtagttgga 639
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>ref|XM_466988.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 621

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                      
Query: 349 tggttgtagctccccttctccttgaaaagctgtgagaaatggtgcttgcagtagaggat 407
           ||||||||||| |||||||||||||| ||||| |||||||||  |||||||||||||||
Sbjct: 509 tggttgtagctgcccttctccttgaacagctgcgagaaatggatcttgcagtagaggat 451
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>gb|AY091249.1| Arabidopsis thaliana putative transcription factor L2 (At3g55770)
           mRNA, complete cds
          Length = 631

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                       
Query: 349 tggttgtagctccccttctccttgaaaagctgtgagaaatggtgcttgcagtagaggatg 408
           |||||||| || |||||||||||||| ||||| | |||||||||||||||||| ||||| 
Sbjct: 515 tggttgtaacttcccttctccttgaagagctgagcgaaatggtgcttgcagtacaggatt 456

                                  
Query: 409 ccttccaaagccgcgtaattgga 431
           ||||| | ||| ||||| |||||
Sbjct: 455 ccttcaagagctgcgtagttgga 433
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>gb|AY063924.1| Arabidopsis thaliana putative transcription factor L2 (At3g55770)
           mRNA, complete cds
          Length = 977

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                       
Query: 349 tggttgtagctccccttctccttgaaaagctgtgagaaatggtgcttgcagtagaggatg 408
           |||||||| || |||||||||||||| ||||| | |||||||||||||||||| ||||| 
Sbjct: 691 tggttgtaacttcccttctccttgaagagctgagcgaaatggtgcttgcagtacaggatt 632

                                  
Query: 409 ccttccaaagccgcgtaattgga 431
           ||||| | ||| ||||| |||||
Sbjct: 631 ccttcaagagctgcgtagttgga 609
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>emb|AL161667.1|ATF1I16 Arabidopsis thaliana DNA chromosome 3, BAC clone F1I16
          Length = 103785

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                         
Query: 349   tggttgtagctccccttctccttgaaaagctgtgagaaatggtgcttgcagtagaggatg 408
             |||||||| || |||||||||||||| ||||| | |||||||||||||||||| ||||| 
Sbjct: 93118 tggttgtaacttcccttctccttgaagagctgagcgaaatggtgcttgcagtacaggatt 93059

                                    
Query: 409   ccttccaaagccgcgtaattgga 431
             ||||| | ||| ||||| |||||
Sbjct: 93058 ccttcaagagctgcgtagttgga 93036
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>gb|AF370574.1|AF370574 Arabidopsis thaliana transcription factor L2 (F1I16_180) mRNA,
           complete cds
          Length = 694

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                       
Query: 349 tggttgtagctccccttctccttgaaaagctgtgagaaatggtgcttgcagtagaggatg 408
           |||||||| || |||||||||||||| ||||| | |||||||||||||||||| ||||| 
Sbjct: 514 tggttgtaacttcccttctccttgaagagctgagcgaaatggtgcttgcagtacaggatt 455

                                  
Query: 409 ccttccaaagccgcgtaattgga 431
           ||||| | ||| ||||| |||||
Sbjct: 454 ccttcaagagctgcgtagttgga 432
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 54/59 (91%)
 Strand = Plus / Plus

                                                                           
Query: 349      tggttgtagctccccttctccttgaaaagctgtgagaaatggtgcttgcagtagaggat 407
                ||||||||||| |||||||||||||| ||||| |||||||||  |||||||||||||||
Sbjct: 25758325 tggttgtagctgcccttctccttgaacagctgcgagaaatggatcttgcagtagaggat 25758383
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>emb|BX822878.1|CNS0A5VL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB6ZE02 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 935

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                       
Query: 349 tggttgtagctccccttctccttgaaaagctgtgagaaatggtgcttgcagtagaggatg 408
           |||||||| || |||||||||||||| ||||| | |||||||||||||||||| ||||| 
Sbjct: 680 tggttgtaacttcccttctccttgaagagctgagcgaaatggtgcttgcagtacaggatt 621

                                  
Query: 409 ccttccaaagccgcgtaattgga 431
           ||||| | ||| ||||| |||||
Sbjct: 620 ccttcaagagctgcgtagttgga 598
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>emb|BX824310.1|CNS0A5HL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH38ZH03 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 883

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                       
Query: 349 tggttgtagctccccttctccttgaaaagctgtgagaaatggtgcttgcagtagaggatg 408
           |||||||| || |||||||||||||| ||||| | |||||||||||||||||| ||||| 
Sbjct: 683 tggttgtaacttcccttctccttgaagagctgagcgaaatggtgcttgcagtacaggatt 624

                                  
Query: 409 ccttccaaagccgcgtaattgga 431
           ||||| | ||| ||||| |||||
Sbjct: 623 ccttcaagagctgcgtagttgga 601
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>gb|AY084361.1| Arabidopsis thaliana clone 105441 mRNA, complete sequence
          Length = 991

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                       
Query: 349 tggttgtagctccccttctccttgaaaagctgtgagaaatggtgcttgcagtagaggatg 408
           |||||||| || |||||||||||||| ||||| | |||||||||||||||||| ||||| 
Sbjct: 721 tggttgtaacttcccttctccttgaagagctgagcgaaatggtgcttgcagtacaggatt 662

                                  
Query: 409 ccttccaaagccgcgtaattgga 431
           ||||| | ||| ||||| |||||
Sbjct: 661 ccttcaagagctgcgtagttgga 639
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>dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0010C01
          Length = 186185

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 54/59 (91%)
 Strand = Plus / Plus

                                                                         
Query: 349    tggttgtagctccccttctccttgaaaagctgtgagaaatggtgcttgcagtagaggat 407
              ||||||||||| |||||||||||||| ||||| |||||||||  |||||||||||||||
Sbjct: 161001 tggttgtagctgcccttctccttgaacagctgcgagaaatggatcttgcagtagaggat 161059
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>dbj|AP004133.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1112_G03
          Length = 106401

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 54/59 (91%)
 Strand = Plus / Plus

                                                                       
Query: 349  tggttgtagctccccttctccttgaaaagctgtgagaaatggtgcttgcagtagaggat 407
            ||||||||||| |||||||||||||| ||||| |||||||||  |||||||||||||||
Sbjct: 4931 tggttgtagctgcccttctccttgaacagctgcgagaaatggatcttgcagtagaggat 4989
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>dbj|AP006402.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT34J23, TM0284,
             complete sequence
          Length = 92675

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 63/72 (87%)
 Strand = Plus / Plus

                                                                         
Query: 348   atggttgtagctccccttctccttgaaaagctgtgagaaatggtgcttgcagtagaggat 407
             |||| ||||| |||| |||||| |||||||||||  ||||||||||||||||||||||| 
Sbjct: 85168 atggctgtaggtccctttctccatgaaaagctgttggaaatggtgcttgcagtagaggac 85227

                         
Query: 408   gccttccaaagc 419
              || ||||||||
Sbjct: 85228 accatccaaagc 85239
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>ref|NM_129548.2| Arabidopsis thaliana zinc ion binding AT2G39900 mRNA, complete cds
          Length = 948

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                       
Query: 340 ttgatcagatggttgtagctccccttctccttgaaaagctgtgagaaatggtgcttgcag 399
           ||||| ||||| ||||| || || ||||||||||||||||| | ||||||||||||||||
Sbjct: 702 ttgatgagatgattgtaacttcctttctccttgaaaagctgagcgaaatggtgcttgcag 643

             
Query: 400 ta 401
           ||
Sbjct: 642 ta 641
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>gb|AY122901.1| Arabidopsis thaliana At2g39900/T28M21.6 mRNA, complete cds
          Length = 603

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                       
Query: 340 ttgatcagatggttgtagctccccttctccttgaaaagctgtgagaaatggtgcttgcag 399
           ||||| ||||| ||||| || || ||||||||||||||||| | ||||||||||||||||
Sbjct: 527 ttgatgagatgattgtaacttcctttctccttgaaaagctgagcgaaatggtgcttgcag 468

             
Query: 400 ta 401
           ||
Sbjct: 467 ta 466
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>gb|AY094448.1| Arabidopsis thaliana At2g39900/T28M21.6 mRNA, complete cds
          Length = 948

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                       
Query: 340 ttgatcagatggttgtagctccccttctccttgaaaagctgtgagaaatggtgcttgcag 399
           ||||| ||||| ||||| || || ||||||||||||||||| | ||||||||||||||||
Sbjct: 702 ttgatgagatgattgtaacttcctttctccttgaaaagctgagcgaaatggtgcttgcag 643

             
Query: 400 ta 401
           ||
Sbjct: 642 ta 641
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>gb|AF002109.3| Arabidopsis thaliana chromosome 2 clone T28M21 map CIC10A06, complete
             sequence
          Length = 108847

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                         
Query: 340   ttgatcagatggttgtagctccccttctccttgaaaagctgtgagaaatggtgcttgcag 399
             ||||| ||||| ||||| || || ||||||||||||||||| | ||||||||||||||||
Sbjct: 28852 ttgatgagatgattgtaacttcctttctccttgaaaagctgagcgaaatggtgcttgcag 28793

               
Query: 400   ta 401
             ||
Sbjct: 28792 ta 28791
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>emb|BX842053.1|CNS09Y9O Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL12ZH07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 892

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                       
Query: 340 ttgatcagatggttgtagctccccttctccttgaaaagctgtgagaaatggtgcttgcag 399
           ||||| ||||| ||||| || || ||||||||||||||||| | ||||||||||||||||
Sbjct: 656 ttgatgagatgattgtaacttcctttctccttgaaaagctgagcgaaatggtgcttgcag 597

             
Query: 400 ta 401
           ||
Sbjct: 596 ta 595
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>emb|Y11002.1|NTLIMDOM N.tabacum mRNA for LIM-domain protein
          Length = 966

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                               
Query: 338 acttgatcagatggttgtagctccccttctccttgaaaagctgtgagaaatg 389
           ||||||||| ||| |||||||| || |||||||||||||||||||| |||||
Sbjct: 649 acttgatcaaatgattgtagctgcctttctccttgaaaagctgtgaaaaatg 598
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>gb|AF184886.1|AF184886 Nicotiana tabacum LIM domain protein WLIM2 (WLIM2) gene, complete cds
          Length = 2821

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                
Query: 338  acttgatcagatggttgtagctccccttctccttgaaaagctgtgagaaatg 389
            ||||||||| ||| |||||||| || |||||||||||||||||||| |||||
Sbjct: 2777 acttgatcaaatgattgtagctgcctttctccttgaaaagctgtgaaaaatg 2726
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>emb|X91398.1|ATRNAATL2 A.thaliana mRNA for transcription factor L2
          Length = 882

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 71/83 (85%), Gaps = 1/83 (1%)
 Strand = Plus / Minus

                                                                       
Query: 349 tggttgtagctccccttctccttgaaaagctgtgagaaatggtgcttgcagtagaggatg 408
           |||||||| || ||||||||||| || ||||| | |||||||||||||||||| ||||| 
Sbjct: 589 tggttgtaacttcccttctcctt-aagagctgagcgaaatggtgcttgcagtacaggatt 531

                                  
Query: 409 ccttccaaagccgcgtaattgga 431
           ||||| | ||| ||||| |||||
Sbjct: 530 ccttcaagagctgcgtagttgga 508
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>emb|BX842219.1|CNS09YBU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL71ZA01 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 727

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                      
Query: 349 tggttgtagctccccttctccttgaaaagctgtgagaaatggtgcttgcagtagaggat 407
           |||||||| || |||||||||||||| ||||| | |||||| ||||||||||| |||||
Sbjct: 560 tggttgtaacttcccttctccttgaagagctgagcgaaatgatgcttgcagtacaggat 502
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>emb|BX842049.1|CNS09Y98 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL12ZB11 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 904

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                    
Query: 340 ttgatcagatggttgtagctccccttctccttgaaaagctgtgagaaatggtgcttg 396
           ||||| ||||| ||||| || || ||||||||||||||||| | |||||||||||||
Sbjct: 657 ttgatgagatgattgtaacttcctttctccttgaaaagctgagcgaaatggtgcttg 601
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>emb|BX822901.1|CNS0A5ZC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB71ZB02 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1203

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                         
Query: 349  tggttgtagctccccttctccttgaaaagctgtgagaaatggtgc 393
            |||||||| || |||||||||||||| ||||| | ||||||||||
Sbjct: 1018 tggttgtaacttcccttctccttgaagagctgagcgaaatggtgc 974
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>gb|AF116851.1|AF116851 Nicotiana tabacum LIM domain protein PLIM-2 (PLIM-2) mRNA, complete
           cds
          Length = 960

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 367 tccttgaaaagctgtgagaaatggtgcttgcagtagaggatgccttcca 415
           ||||| |||||||||  |||||| ||||||||||||||||  |||||||
Sbjct: 257 tccttaaaaagctgttcgaaatgatgcttgcagtagaggactccttcca 209
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>gb|AF443117.1|AF443117 Gossypium hirsutum LIM domain protein (LIM-1) mRNA, complete cds
          Length = 848

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 66/80 (82%)
 Strand = Plus / Minus

                                                                       
Query: 322 cgcttgaccgatgcgcacttgatcagatggttgtagctccccttctccttgaaaagctgt 381
           |||||||  |||||| | ||||| ||||| |||||||| || ||||||||||| ||||| 
Sbjct: 686 cgcttgattgatgcggatttgataagatgattgtagcttcctttctccttgaagagctgg 627

                               
Query: 382 gagaaatggtgcttgcagta 401
           || || || || ||||||||
Sbjct: 626 gaaaagtgatgtttgcagta 607
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>gb|AY109812.1| Zea mays CL4474_1 mRNA sequence
          Length = 1014

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 349 tggttgtagctccccttctccttgaaaagctg 380
           ||||||||||||||||||||| |||| |||||
Sbjct: 470 tggttgtagctccccttctccatgaacagctg 439
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>gb|AC149594.2| Xenopus tropicalis chromosome CH216-62P2, complete sequence
          Length = 167602

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 372   gaaaagctgtgagaaatggtg 392
             |||||||||||||||||||||
Sbjct: 76278 gaaaagctgtgagaaatggtg 76298
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 100     caacatgatccagctagcaca 120
               |||||||||||||||||||||
Sbjct: 1409215 caacatgatccagctagcaca 1409235
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>dbj|AP003233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0037C04
          Length = 137879

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 100    caacatgatccagctagcaca 120
              |||||||||||||||||||||
Sbjct: 107266 caacatgatccagctagcaca 107286
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>dbj|AP002909.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0044F08
          Length = 141528

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 100   caacatgatccagctagcaca 120
             |||||||||||||||||||||
Sbjct: 58836 caacatgatccagctagcaca 58856
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>gb|AC084386.2| Mus musculus BAC clone RP23-61O2 from 17, complete sequence
          Length = 209523

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 152    tccccggagcttgaacacag 171
              ||||||||||||||||||||
Sbjct: 191925 tccccggagcttgaacacag 191944
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>gb|AC006404.25| Mus musculus strain 129/Sv clone ct7-141k23 map 6, complete sequence
          Length = 142777

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 130   acgaaattgataggtcctgg 149
             ||||||||||||||||||||
Sbjct: 89650 acgaaattgataggtcctgg 89631
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>emb|AL663115.11| Mouse DNA sequence from clone RP23-452C23 on chromosome 11 Contains the
              gene for a novel protein simialr to cell division cycle
              associated 4 Cdca4, a ribosomal protein L15 (Rpl15)
              pseudogene, the 3' end of a novel gene and two CpG islands,
              complete sequence
          Length = 183089

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 358    ctccccttctccttgaaaag 377
              ||||||||||||||||||||
Sbjct: 162723 ctccccttctccttgaaaag 162742
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>dbj|AB072914.1| Expression vector pMFXU4 DNA, complete sequence
          Length = 7052

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 52   agcaatttcaacagtttctt 71
            ||||||||||||||||||||
Sbjct: 3176 agcaatttcaacagtttctt 3195
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>gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome
          Length = 2839318

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 268     gcagccgcctgtgctgtttg 287
               ||||||||||||||||||||
Sbjct: 1853776 gcagccgcctgtgctgtttg 1853795
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>gb|AC155636.3| Mus musculus BAC clone RP23-345F5 from chromosome 17, complete sequence
          Length = 223528

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 152    tccccggagcttgaacacag 171
              ||||||||||||||||||||
Sbjct: 156166 tccccggagcttgaacacag 156147
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>emb|CT030184.14| Mouse DNA sequence from clone RP23-9C19 on chromosome 13, complete
            sequence
          Length = 201341

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 352  ttgtagctccccttctcctt 371
            ||||||||||||||||||||
Sbjct: 3196 ttgtagctccccttctcctt 3215
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>gb|AC131029.6| Mus musculus chromosome 14, clone RP23-304N24, complete sequence
          Length = 239588

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     gaatgacatcaactccatgg 94
              ||||||||||||||||||||
Sbjct: 221246 gaatgacatcaactccatgg 221265
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>gb|AC103404.13| Mus musculus chromosome 5, clone RP23-21O1, complete sequence
          Length = 251988

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 38     agtacctgatgcacagcaat 57
              ||||||||||||||||||||
Sbjct: 126680 agtacctgatgcacagcaat 126661
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>dbj|D85624.1|CNASA Citrullus lanatus serine acetyltransferase (Sat) DNA, complete cds
          Length = 5729

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 77  atgacatcaactccatggtt 96
           ||||||||||||||||||||
Sbjct: 195 atgacatcaactccatggtt 176
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>emb|CT030187.6| Mouse DNA sequence from clone RP23-38L5 on chromosome 13, complete
             sequence
          Length = 152073

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 352   ttgtagctccccttctcctt 371
             ||||||||||||||||||||
Sbjct: 43162 ttgtagctccccttctcctt 43143
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>emb|AL929576.7| Zebrafish DNA sequence from clone CH211-188M17, complete sequence
          Length = 161073

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 172   catacagcaggttacaatcgtaaataaa 199
             ||||| |||| |||||||||||||||||
Sbjct: 10701 catactgcagtttacaatcgtaaataaa 10728
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>gb|AC083894.21| Mus musculus strain C57BL/6J chromosome 6 clone rp23-259j8, complete
              sequence
          Length = 167273

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 130    acgaaattgataggtcctgg 149
              ||||||||||||||||||||
Sbjct: 106132 acgaaattgataggtcctgg 106151
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>gb|M86236.1|YSAURAIII Candida boidinii orotidine-5'-phosphate decarboxylase (URA3) gene,
           complete cds
          Length = 1686

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 52  agcaatttcaacagtttctt 71
           ||||||||||||||||||||
Sbjct: 743 agcaatttcaacagtttctt 724
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>dbj|AB006530.1| Citrullus lanatus Sat gene for serine acetyltransferase, complete cds
            and 5'-flanking region
          Length = 7344

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 77   atgacatcaactccatggtt 96
            ||||||||||||||||||||
Sbjct: 1810 atgacatcaactccatggtt 1791


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,704,283
Number of Sequences: 3902068
Number of extensions: 3704283
Number of successful extensions: 80495
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80312
Number of HSP's gapped (non-prelim): 182
length of query: 435
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 413
effective length of database: 17,147,199,772
effective search space: 7081793505836
effective search space used: 7081793505836
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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