ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart26f11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|Y13190.1|HVWL5MRNA Hordeum vulgare mRNA for hypothetical pro... 654 0.0
2dbj|AK073265.1| Oryza sativa (japonica cultivar-group) cDNA clon... 268 1e-68
3ref|XM_473876.1| Oryza sativa (japonica cultivar-group), predic... 264 2e-67
4emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4,... 178 1e-41
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
6gb|AY105797.1| Zea mays PCO117545 mRNA sequence 145 1e-31
7gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chr... 42 1.4
8gb|AC124348.5| Mus musculus BAC clone RP24-462O9 from chromosome... 42 1.4
9ref|XM_570061.1| Cryptococcus neoformans var. neoformans JEC21 h... 42 1.4
10gb|AC132406.4| Mus musculus BAC clone RP23-340E1 from chromosome... 42 1.4
11gb|AC158593.8| Mus musculus 10 BAC RP23-197F5 (Roswell Park Canc... 42 1.4
12dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
13gb|AC078930.13|AC078930 Mus musculus 10 BAC 280B6 (Roswell Park ... 42 1.4
14gb|AC012175.7| Homo sapiens chromosome 16 clone RP11-19H6, compl... 42 1.4
15dbj|AP003251.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
16gb|AC124441.5| Mus musculus BAC clone RP24-176L17 from chromosom... 40 5.7
17emb|AL591463.7| Human DNA sequence from clone RP11-275A6 on chro... 40 5.7
18emb|AL445588.12| Human DNA sequence from clone RP11-522H16 on ch... 40 5.7
19gb|AC121160.3| Homo sapiens BAC clone RP11-730F8 from 4, complet... 40 5.7
20gb|AC125287.1| Homo sapiens chromosome 4 clone RP11-730F8, compl... 40 5.7
21gb|AC108517.3| Homo sapiens BAC clone RP11-622J8 from 4, complet... 40 5.7
22gb|AC093898.3| Homo sapiens BAC clone RP11-724A24 from 4, comple... 40 5.7
23gb|AC106779.3| Homo sapiens chromosome 16 clone RP11-343H19, com... 40 5.7
24gb|AC105269.2| Homo sapiens chromosome 1 clone RP4-788P17, compl... 40 5.7
25gb|AC155297.2| Mus musculus BAC clone RP24-238D1 from chromosome... 40 5.7
26dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
27gb|AF052191.1|AF052191 Strongylocentrotus purpuratus katanin p60... 40 5.7
28ref|NM_214568.1| Strongylocentrotus purpuratus katanin p60 (katn... 40 5.7
29gb|AC112484.8| Homo sapiens 3 BAC RP11-723O4 (Roswell Park Cance... 40 5.7
30gb|AF126079.1|AF126079 Spongiobothrium sp. dev-stage adult 18S s... 40 5.7
31dbj|AP003545.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
32emb|CT572983.7| Mouse DNA sequence from clone RP23-110N1 on chro... 40 5.7 
>emb|Y13190.1|HVWL5MRNA Hordeum vulgare mRNA for hypothetical protein, partial, clone WL5
          Length = 335

 Score =  654 bits (330), Expect = 0.0
 Identities = 333/334 (99%)
 Strand = Plus / Minus

                                                                       
Query: 14  gcttatttcaaaccaattacgttcagcgggttacaaaattcacgtacacaataaagtcgg 73
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gcttatttcaaaccaattacgttcagcgggttacaaaattcacgtacacaataaagtcgg 275

                                                                       
Query: 74  tgcggagccactgatgacaatactgaagggtggtacatgacataaacgagacagtgacat 133
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tgcggagccactgatgacaatactgaagggtggtacatgacataaacgagacagtgacat 215

                                                                       
Query: 134 aaaccaaggatggcatcacaatttgctggacggtacacctacaccagaggccctaacctt 193
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 aaaccaaggatggcatcacaatttgctggacggtacacctacaccagaggccctaacctt 155

                                                                       
Query: 194 cttctcgatcacctttgagagctccttcacttcctccttggggatgtggcgagggtgact 253
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 cttctcgatcacctttgagagctccttcacttcctccttggggatgtggcgagggtgact 95

                                                                       
Query: 254 caaccaaagccctccatcgaccaccagcgtagtcccatttacatatttgcctgcatcaaa 313
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 94  caaccaaagccctccatcgaccaccagcgtagtcccatttacatatttgcctgcatcaga 35

                                             
Query: 314 agcaagatagagcgcggccattgcaatgtcccgt 347
           ||||||||||||||||||||||||||||||||||
Sbjct: 34  agcaagatagagcgcggccattgcaatgtcccgt 1
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>dbj|AK073265.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025B16, full
            insert sequence
          Length = 1364

 Score =  268 bits (135), Expect = 1e-68
 Identities = 243/279 (87%)
 Strand = Plus / Minus

                                                                        
Query: 147  catcacaatttgctggacggtacacctacaccagaggccctaaccttcttctcgatcacc 206
            |||||||||||||| || || ||||| ||||||||||||||||||||||||||||  |||
Sbjct: 1145 catcacaatttgcttgatggcacaccaacaccagaggccctaaccttcttctcgacaacc 1086

                                                                        
Query: 207  tttgagagctccttcacttcctccttggggatgtggcgagggtgactcaaccaaagccct 266
            |||||||||||||||||||||||||| || || ||||||||| |||| | |||||| |||
Sbjct: 1085 tttgagagctccttcacttcctccttcggaatatggcgagggcgacttagccaaagacct 1026

                                                                        
Query: 267  ccatcgaccaccagcgtagtcccatttacatatttgcctgcatcaaaagcaagatagagc 326
            ||||| || ||||  |||||||||||||||||||| ||||||||| ||||||| || || 
Sbjct: 1025 ccatcaacaaccactgtagtcccatttacatattttcctgcatcagaagcaaggtaaagt 966

                                                                        
Query: 327  gcggccattgcaatgtcccgtgtctcccccaacttaaataaaggcatcatttcccttttc 386
            || ||||| || ||||||| | | || |||||||||||||||||||| |||||||   ||
Sbjct: 965  gcagccatagctatgtcccatttttcacccaacttaaataaaggcattatttcccgactc 906

                                                   
Query: 387  cccttgcccatttcatcaggtgcaagcttcctcagtcct 425
            |||||| ||||||| ||||||||||||||||||| ||||
Sbjct: 905  cccttggccatttcctcaggtgcaagcttcctcattcct 867
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>ref|XM_473876.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 900

 Score =  264 bits (133), Expect = 2e-67
 Identities = 241/277 (87%)
 Strand = Plus / Minus

                                                                       
Query: 149 tcacaatttgctggacggtacacctacaccagaggccctaaccttcttctcgatcacctt 208
           |||||||||||| || || ||||| ||||||||||||||||||||||||||||  |||||
Sbjct: 900 tcacaatttgcttgatggcacaccaacaccagaggccctaaccttcttctcgacaacctt 841

                                                                       
Query: 209 tgagagctccttcacttcctccttggggatgtggcgagggtgactcaaccaaagccctcc 268
           |||||||||||||||||||||||| || || ||||||||| |||| | |||||| |||||
Sbjct: 840 tgagagctccttcacttcctccttcggaatatggcgagggcgacttagccaaagacctcc 781

                                                                       
Query: 269 atcgaccaccagcgtagtcccatttacatatttgcctgcatcaaaagcaagatagagcgc 328
           ||| || ||||  |||||||||||||||||||| ||||||||| ||||||| || || ||
Sbjct: 780 atcaacaaccactgtagtcccatttacatattttcctgcatcagaagcaaggtaaagtgc 721

                                                                       
Query: 329 ggccattgcaatgtcccgtgtctcccccaacttaaataaaggcatcatttcccttttccc 388
            ||||| || ||||||| | | || |||||||||||||||||||| |||||||   ||||
Sbjct: 720 agccatagctatgtcccatttttcacccaacttaaataaaggcattatttcccgactccc 661

                                                
Query: 389 cttgcccatttcatcaggtgcaagcttcctcagtcct 425
           |||| ||||||| ||||||||||||||||||| ||||
Sbjct: 660 cttggccatttcctcaggtgcaagcttcctcattcct 624
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>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17,
              complete sequence
          Length = 160484

 Score =  178 bits (90), Expect = 1e-41
 Identities = 144/162 (88%)
 Strand = Plus / Minus

                                                                          
Query: 147    catcacaatttgctggacggtacacctacaccagaggccctaaccttcttctcgatcacc 206
              |||||||||||||| || || ||||| ||||||||||||||||||||||||||||  |||
Sbjct: 157290 catcacaatttgcttgatggcacaccaacaccagaggccctaaccttcttctcgacaacc 157231

                                                                          
Query: 207    tttgagagctccttcacttcctccttggggatgtggcgagggtgactcaaccaaagccct 266
              |||||||||||||||||||||||||| || || ||||||||| |||| | |||||| |||
Sbjct: 157230 tttgagagctccttcacttcctccttcggaatatggcgagggcgacttagccaaagacct 157171

                                                        
Query: 267    ccatcgaccaccagcgtagtcccatttacatatttgcctgca 308
              ||||| || ||||  |||||||||||||||||||| ||||||
Sbjct: 157170 ccatcaacaaccactgtagtcccatttacatattttcctgca 157129



 Score =  101 bits (51), Expect = 2e-18
 Identities = 105/123 (85%)
 Strand = Plus / Minus

                                                                          
Query: 303    cctgcatcaaaagcaagatagagcgcggccattgcaatgtcccgtgtctcccccaactta 362
              ||||||||| ||||||| || || || ||||| || ||||||| | | || |||||||||
Sbjct: 156870 cctgcatcagaagcaaggtaaagtgcagccatagctatgtcccatttttcacccaactta 156811

                                                                          
Query: 363    aataaaggcatcatttcccttttccccttgcccatttcatcaggtgcaagcttcctcagt 422
              ||||||||||| |||||||   |||||||| ||||||| ||||||||||||||||||| |
Sbjct: 156810 aataaaggcattatttcccgactccccttggccatttcctcaggtgcaagcttcctcatt 156751

                 
Query: 423    cct 425
              |||
Sbjct: 156750 cct 156748
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  178 bits (90), Expect = 1e-41
 Identities = 144/162 (88%)
 Strand = Plus / Minus

                                                                            
Query: 147      catcacaatttgctggacggtacacctacaccagaggccctaaccttcttctcgatcacc 206
                |||||||||||||| || || ||||| ||||||||||||||||||||||||||||  |||
Sbjct: 31175209 catcacaatttgcttgatggcacaccaacaccagaggccctaaccttcttctcgacaacc 31175150

                                                                            
Query: 207      tttgagagctccttcacttcctccttggggatgtggcgagggtgactcaaccaaagccct 266
                |||||||||||||||||||||||||| || || ||||||||| |||| | |||||| |||
Sbjct: 31175149 tttgagagctccttcacttcctccttcggaatatggcgagggcgacttagccaaagacct 31175090

                                                          
Query: 267      ccatcgaccaccagcgtagtcccatttacatatttgcctgca 308
                ||||| || ||||  |||||||||||||||||||| ||||||
Sbjct: 31175089 ccatcaacaaccactgtagtcccatttacatattttcctgca 31175048



 Score =  101 bits (51), Expect = 2e-18
 Identities = 105/123 (85%)
 Strand = Plus / Minus

                                                                            
Query: 303      cctgcatcaaaagcaagatagagcgcggccattgcaatgtcccgtgtctcccccaactta 362
                ||||||||| ||||||| || || || ||||| || ||||||| | | || |||||||||
Sbjct: 31174789 cctgcatcagaagcaaggtaaagtgcagccatagctatgtcccatttttcacccaactta 31174730

                                                                            
Query: 363      aataaaggcatcatttcccttttccccttgcccatttcatcaggtgcaagcttcctcagt 422
                ||||||||||| |||||||   |||||||| ||||||| ||||||||||||||||||| |
Sbjct: 31174729 aataaaggcattatttcccgactccccttggccatttcctcaggtgcaagcttcctcatt 31174670

                   
Query: 423      cct 425
                |||
Sbjct: 31174669 cct 31174667
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>gb|AY105797.1| Zea mays PCO117545 mRNA sequence
          Length = 961

 Score =  145 bits (73), Expect = 1e-31
 Identities = 166/197 (84%), Gaps = 2/197 (1%)
 Strand = Plus / Minus

                                                                       
Query: 168 acacctacaccagaggccctaaccttcttctcgatcacctttgagagctccttcacttcc 227
           ||||| ||||||||||||||||| |||||||||| ||| ||  | || ||||| | ||||
Sbjct: 961 acaccaacaccagaggccctaactttcttctcgaccactttcaacagttccttaanttcc 902

                                                                       
Query: 228 tccttggggatgtggcgagggtgactcaaccaaagccctccatcgaccaccagcgtagtc 287
           |||||||| || |||||||||||| | | ||||  |  ||||||||||||||| || |||
Sbjct: 901 tccttgggaatntggcgagggtgatttanccaagac--tccatcgaccaccagtgttgtc 844

                                                                       
Query: 288 ccatttacatatttgcctgcatcaaaagcaagatagagcgcggccattgcaatgtcccgt 347
           |||||||||||||||||||||||| |||  || |||||||| |||||||| |||||||| 
Sbjct: 843 ccatttacatatttgcctgcatcagaagtcaggtagagcgcagccattgctatgtcccgc 784

                            
Query: 348 gtctcccccaacttaaa 364
            ||||||| || |||||
Sbjct: 783 ttctccccaaatttaaa 767



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 387 cccttgcccatttcatcaggtgcaagcttcctcag 421
           ||||||| |||||| ||||||||||||||||||||
Sbjct: 747 cccttgctcatttcttcaggtgcaagcttcctcag 713
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>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete
               sequence
          Length = 1783081

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 383     tttccccttgcccatttcatc 403
               |||||||||||||||||||||
Sbjct: 1392063 tttccccttgcccatttcatc 1392043
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>gb|AC124348.5| Mus musculus BAC clone RP24-462O9 from chromosome 9, complete sequence
          Length = 187568

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 128    tgacataaaccaaggatggca 148
              |||||||||||||||||||||
Sbjct: 110400 tgacataaaccaaggatggca 110380
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>ref|XM_570061.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CND05100) partial mRNA
          Length = 1112

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 383 tttccccttgcccatttcatc 403
           |||||||||||||||||||||
Sbjct: 601 tttccccttgcccatttcatc 621
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>gb|AC132406.4| Mus musculus BAC clone RP23-340E1 from chromosome 9, complete sequence
          Length = 222617

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 128    tgacataaaccaaggatggca 148
              |||||||||||||||||||||
Sbjct: 155720 tgacataaaccaaggatggca 155740
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>gb|AC158593.8| Mus musculus 10 BAC RP23-197F5 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 216621

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 172    ctacaccagaggccctaacct 192
              |||||||||||||||||||||
Sbjct: 170576 ctacaccagaggccctaacct 170596
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 286      tcccatttacatatttgcctg 306
                |||||||||||||||||||||
Sbjct: 36320795 tcccatttacatatttgcctg 36320775
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>gb|AC078930.13|AC078930 Mus musculus 10 BAC 280B6 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 226168

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 172    ctacaccagaggccctaacct 192
              |||||||||||||||||||||
Sbjct: 173449 ctacaccagaggccctaacct 173469
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>gb|AC012175.7| Homo sapiens chromosome 16 clone RP11-19H6, complete sequence
          Length = 180634

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 380   ccttttccccttgcccatttc 400
             |||||||||||||||||||||
Sbjct: 36741 ccttttccccttgcccatttc 36721
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>dbj|AP003251.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0446B05
          Length = 149145

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 286   tcccatttacatatttgcctg 306
             |||||||||||||||||||||
Sbjct: 70672 tcccatttacatatttgcctg 70652
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>gb|AC124441.5| Mus musculus BAC clone RP24-176L17 from chromosome 18, complete
             sequence
          Length = 190119

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 234   gggatgtggcgagggtgact 253
             ||||||||||||||||||||
Sbjct: 49479 gggatgtggcgagggtgact 49460
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>emb|AL591463.7| Human DNA sequence from clone RP11-275A6 on chromosome 1 Contains the
             3' end of a novel gene and a novel gene, complete sequence
          Length = 186710

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 383   tttccccttgcccatttcat 402
             ||||||||||||||||||||
Sbjct: 44004 tttccccttgcccatttcat 43985
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>emb|AL445588.12| Human DNA sequence from clone RP11-522H16 on chromosome 13, complete
             sequence
          Length = 174591

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    tacaaaattcacgtacacaa 64
             ||||||||||||||||||||
Sbjct: 44538 tacaaaattcacgtacacaa 44519
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>gb|AC121160.3| Homo sapiens BAC clone RP11-730F8 from 4, complete sequence
          Length = 110227

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      aggactgaacttgcttattt 21
              ||||||||||||||||||||
Sbjct: 104680 aggactgaacttgcttattt 104699
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>gb|AC125287.1| Homo sapiens chromosome 4 clone RP11-730F8, complete sequence
          Length = 110227

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      aggactgaacttgcttattt 21
              ||||||||||||||||||||
Sbjct: 104680 aggactgaacttgcttattt 104699
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>gb|AC108517.3| Homo sapiens BAC clone RP11-622J8 from 4, complete sequence
          Length = 128233

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 284    agtcccatttacatatttgc 303
              ||||||||||||||||||||
Sbjct: 117426 agtcccatttacatatttgc 117407
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>gb|AC093898.3| Homo sapiens BAC clone RP11-724A24 from 4, complete sequence
          Length = 183273

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 2      aggactgaacttgcttattt 21
              ||||||||||||||||||||
Sbjct: 102760 aggactgaacttgcttattt 102741
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>gb|AC106779.3| Homo sapiens chromosome 16 clone RP11-343H19, complete sequence
          Length = 158297

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 48     aaaattcacgtacacaataa 67
              ||||||||||||||||||||
Sbjct: 126620 aaaattcacgtacacaataa 126601
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>gb|AC105269.2| Homo sapiens chromosome 1 clone RP4-788P17, complete sequence
          Length = 120910

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 383   tttccccttgcccatttcat 402
             ||||||||||||||||||||
Sbjct: 94863 tttccccttgcccatttcat 94844
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>gb|AC155297.2| Mus musculus BAC clone RP24-238D1 from chromosome 13, complete sequence
          Length = 174487

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 302    gcctgcatcaaaagcaagat 321
              ||||||||||||||||||||
Sbjct: 126196 gcctgcatcaaaagcaagat 126215
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 378      tcccttttccccttgcccat 397
                ||||||||||||||||||||
Sbjct: 15395047 tcccttttccccttgcccat 15395066
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>gb|AF052191.1|AF052191 Strongylocentrotus purpuratus katanin p60 subunit mRNA, complete cds
          Length = 1551

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 225  tcctccttggggatgtggcg 244
            ||||||||||||||||||||
Sbjct: 1430 tcctccttggggatgtggcg 1411
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>ref|NM_214568.1| Strongylocentrotus purpuratus katanin p60 (katn), mRNA
          Length = 1551

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 225  tcctccttggggatgtggcg 244
            ||||||||||||||||||||
Sbjct: 1430 tcctccttggggatgtggcg 1411
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>gb|AC112484.8| Homo sapiens 3 BAC RP11-723O4 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 185470

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 226    cctccttggggatgtggcgagggt 249
              ||||| ||||||||||||||||||
Sbjct: 148702 cctccctggggatgtggcgagggt 148725
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>gb|AF126079.1|AF126079 Spongiobothrium sp. dev-stage adult 18S small subunit ribosomal RNA
           gene, partial sequence
          Length = 583

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 174 acaccagaggccctaaccttcttc 197
           ||||||||||||||| ||||||||
Sbjct: 294 acaccagaggccctacccttcttc 271
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>dbj|AP003545.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0613F06
          Length = 184289

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 378   tcccttttccccttgcccat 397
             ||||||||||||||||||||
Sbjct: 62562 tcccttttccccttgcccat 62581
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>emb|CT572983.7| Mouse DNA sequence from clone RP23-110N1 on chromosome 14, complete
              sequence
          Length = 218673

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 369    ggcatcatttcccttttccc 388
              ||||||||||||||||||||
Sbjct: 115001 ggcatcatttcccttttccc 115020


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,755,636
Number of Sequences: 3902068
Number of extensions: 3755636
Number of successful extensions: 65339
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65231
Number of HSP's gapped (non-prelim): 107
length of query: 425
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 403
effective length of database: 17,147,199,772
effective search space: 6910321508116
effective search space used: 6910321508116
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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