ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart26f03 |
|---|---|
| Clone Library Name | barley_pub |
>GSTF7_ARATH (Q96324) Glutathione S-transferase (EC 2.5.1.18) (GST class-phi)| Length = 214 Score = 57.4 bits (137), Expect = 2e-08 Identities = 23/49 (46%), Positives = 34/49 (69%) Frame = -1 Query: 455 LAGDKFTLADLSHMPNADRLASDERTARLIQSRRNVSRWWTAVSSRGSW 309 L GD+FTLADLSHMP + ++ + L+ SR N++RWW +S+R +W Sbjct: 157 LGGDEFTLADLSHMPGMRYIMNETSLSGLVTSRENLNRWWNEISARPAW 205
>GSTF3_ARATH (P42761) Glutathione S-transferase ERD13 (EC 2.5.1.18) (GST| class-phi) Length = 214 Score = 52.4 bits (124), Expect = 5e-07 Identities = 24/54 (44%), Positives = 34/54 (62%) Frame = -1 Query: 455 LAGDKFTLADLSHMPNADRLASDERTARLIQSRRNVSRWWTAVSSRGSWVYVKS 294 LAGD +LADL+H+P + L A LI+ R++VS WW +SSR +W V + Sbjct: 155 LAGDFVSLADLAHLPFTEYLVGPIGKAHLIKDRKHVSAWWDKISSRAAWKEVSA 208
>GSTF6_ARATH (Q96266) Glutathione S-transferase 6 (EC 2.5.1.18) (GST class phi)| Length = 215 Score = 45.8 bits (107), Expect = 5e-05 Identities = 25/57 (43%), Positives = 31/57 (54%) Frame = -1 Query: 455 LAGDKFTLADLSHMPNADRLASDERTARLIQSRRNVSRWWTAVSSRGSWVYVKSLQR 285 LAGD FTLADL H+P L + L SR VS W +S+R +W V LQ+ Sbjct: 159 LAGDSFTLADLHHLPAIHYLLGTDSKV-LFDSRPKVSEWIKKISARPAWAKVIDLQK 214
>GSTF1_TOBAC (P30109) Glutathione S-transferase PARB (EC 2.5.1.18) (GST| class-phi) Length = 213 Score = 41.2 bits (95), Expect = 0.001 Identities = 21/50 (42%), Positives = 27/50 (54%) Frame = -1 Query: 455 LAGDKFTLADLSHMPNADRLASDERTARLIQSRRNVSRWWTAVSSRGSWV 306 L GD FTL DL H+PN L S + + SR VS W + +R +WV Sbjct: 157 LGGDSFTLVDLHHIPNIYYLMS-SKVKEVFDSRPRVSAWCADILARPAWV 205
>GSTF2_TOBAC (P46440) Glutathione S-transferase APIC (EC 2.5.1.18) (GST| class-phi) Length = 213 Score = 40.8 bits (94), Expect = 0.002 Identities = 21/50 (42%), Positives = 27/50 (54%) Frame = -1 Query: 455 LAGDKFTLADLSHMPNADRLASDERTARLIQSRRNVSRWWTAVSSRGSWV 306 L GD FTL DL H+PN L S + + SR VS W + +R +WV Sbjct: 157 LGGDSFTLVDLHHIPNIYYLMS-TKVKEVFDSRPRVSAWCADILARPAWV 205
>GSTF_SILCU (Q04522) Glutathione S-transferase (EC 2.5.1.18) (GST class-phi)| Length = 216 Score = 38.5 bits (88), Expect = 0.008 Identities = 20/56 (35%), Positives = 29/56 (51%) Frame = -1 Query: 452 AGDKFTLADLSHMPNADRLASDERTARLIQSRRNVSRWWTAVSSRGSWVYVKSLQR 285 A D FTL DL H+P L + +L + R +VS W + +R SW +LQ+ Sbjct: 160 ANDSFTLVDLHHLPLLGYLMGTQ-VKKLFEERAHVSAWCKKILARPSWEKTLALQK 214
>GSTF_HYOMU (P46423) Glutathione S-transferase (EC 2.5.1.18) (GST class-phi)| (25 kDa auxin-binding protein) Length = 212 Score = 38.1 bits (87), Expect = 0.011 Identities = 20/49 (40%), Positives = 26/49 (53%) Frame = -1 Query: 455 LAGDKFTLADLSHMPNADRLASDERTARLIQSRRNVSRWWTAVSSRGSW 309 L GD FTLADL H P + L + L SR +VS W + +R +W Sbjct: 157 LGGDSFTLADLHHAPAMNYLMG-TKVKSLFDSRPHVSAWCADILARPAW 204
>GSTF5_ARATH (P42769) Glutathione S-transferase PM239X14 (EC 2.5.1.18) (GST| class-phi) Length = 218 Score = 37.7 bits (86), Expect = 0.014 Identities = 19/42 (45%), Positives = 26/42 (61%) Frame = -1 Query: 455 LAGDKFTLADLSHMPNADRLASDERTARLIQSRRNVSRWWTA 330 LAG+ FTLADL H+P +A E T ++ S+ +V WW A Sbjct: 161 LAGNDFTLADLFHLPYGAMVAQLEPT--VLDSKPHVKAWWAA 200
>GSTH2_ORYSA (O82451) Probable glutathione S-transferase GSTF2 (EC 2.5.1.18)| (GST-II) Length = 214 Score = 37.0 bits (84), Expect = 0.024 Identities = 21/58 (36%), Positives = 32/58 (55%) Frame = -1 Query: 455 LAGDKFTLADLSHMPNADRLASDERTARLIQSRRNVSRWWTAVSSRGSWVYVKSLQRP 282 LAGD ++ADLSH+ L + A ++ + +V WWT + +R S V SL +P Sbjct: 156 LAGDYISVADLSHVAGTVCLGATPH-ASVLDAYPHVKAWWTDLMARPSSQKVASLMKP 212
>GSTF3_MAIZE (P04907) Glutathione S-transferase III (EC 2.5.1.18) (GST-III) (GST| class-phi) Length = 221 Score = 34.7 bits (78), Expect = 0.12 Identities = 16/46 (34%), Positives = 26/46 (56%) Frame = -1 Query: 455 LAGDKFTLADLSHMPNADRLASDERTARLIQSRRNVSRWWTAVSSR 318 LAGD+FTLAD +H ++ + +R +V WW A+++R Sbjct: 156 LAGDEFTLADANHALLPALTSARPPRPGCVAARPHVKAWWEAIAAR 201
>FOXE3_MOUSE (Q9QY14) Forkhead box protein E3| Length = 288 Score = 34.3 bits (77), Expect = 0.15 Identities = 22/58 (37%), Positives = 27/58 (46%) Frame = -3 Query: 453 RRRQVHPRRPLPHAQRRPPRLRRAHCPPHPVPQERQPLVDCRLEPRVLGVRQEPAAPV 280 RRR+ R LP PP A PP P P P RL+ +LG++ EP PV Sbjct: 155 RRRKRFKRAELPAPPPPPPPFPYAPFPPPPAPASAPPARLFRLD-SLLGLQPEPPGPV 211
>GSTF1_MAIZE (P12653) Glutathione S-transferase I (EC 2.5.1.18) (GST-I) (GST-29)| (GST class-phi) Length = 213 Score = 33.1 bits (74), Expect = 0.34 Identities = 20/60 (33%), Positives = 33/60 (55%) Frame = -1 Query: 455 LAGDKFTLADLSHMPNADRLASDERTARLIQSRRNVSRWWTAVSSRGSWVYVKSLQRPSS 276 LAGD +LADL+H+ L + A ++ + +V WW+ + R S V +L +PS+ Sbjct: 155 LAGDFLSLADLNHVSVTLCLFATPY-ASVLDAYPHVKAWWSGLMERPSVQKVAALMKPSA 213
>GAG_AVISN (P03342) Gag polyprotein [Contains: Core protein p15; Inner coat| protein p12; Core shell protein p30] (Fragment) Length = 313 Score = 33.1 bits (74), Expect = 0.34 Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 7/64 (10%) Frame = -3 Query: 447 RQVHPRRP-LPHAQRRPPRLRRAH------CPPHPVPQERQPLVDCRLEPRVLGVRQEPA 289 ++V+PRRP LP A PPR+RRA P P P P V +E G Q+P Sbjct: 117 QKVNPRRPVLPSAPESPPRIRRAQFLDERPLSPAPAPPPPYPEVSAIVEDTREG--QQPD 174 Query: 288 APVV 277 + V+ Sbjct: 175 STVM 178
>MYST3_RAT (Q5TKR9) Histone acetyltransferase MYST3 (EC 2.3.1.48) (EC 2.3.1.-)| (MYST protein 3) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 3) (Monocytic leukemia zinc finger protein) (Monocytic leukemia zinc finger homolog) Length = 1998 Score = 33.1 bits (74), Expect = 0.34 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = -3 Query: 450 RRQVHPRRPLPHAQRRPPRLRRAHCPPHPVPQERQPLVDCRL 325 ++Q P+ P P Q++PP + P P PQ++ PL C + Sbjct: 1660 QQQAAPQPPPPQPQQQPPPPPQQQPQPPPPPQQQPPLSQCSM 1701
>GSTF4_ARATH (P46422) Glutathione S-transferase PM24 (EC 2.5.1.18) (24 kDa| auxin-binding protein) (GST class-phi) Length = 211 Score = 32.3 bits (72), Expect = 0.58 Identities = 17/46 (36%), Positives = 23/46 (50%) Frame = -1 Query: 455 LAGDKFTLADLSHMPNADRLASDERTARLIQSRRNVSRWWTAVSSR 318 LAG+ FTL DL H+P L T +L R V+ W ++ R Sbjct: 160 LAGETFTLTDLHHIPAIQYLLGTP-TKKLFTERPRVNEWVAEITKR 204
>SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich| (Polypyrimidine tract-binding protein-associated splicing factor) (PTB-associated splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit) Length = 699 Score = 32.0 bits (71), Expect = 0.76 Identities = 16/37 (43%), Positives = 22/37 (59%) Frame = -3 Query: 447 RQVHPRRPLPHAQRRPPRLRRAHCPPHPVPQERQPLV 337 +Q P++P PH Q PP + H P P PQE +P+V Sbjct: 73 QQPPPQQPPPHQQ--PPPHQPPHQQPPPPPQESKPVV 107
>GST16_ARATH (Q9SLM6) Glutathione S-transferase 16 (EC 2.5.1.18) (GST class-phi)| Length = 212 Score = 32.0 bits (71), Expect = 0.76 Identities = 17/46 (36%), Positives = 23/46 (50%) Frame = -1 Query: 455 LAGDKFTLADLSHMPNADRLASDERTARLIQSRRNVSRWWTAVSSR 318 LAG+ FTL DL H+P L T +L R V+ W ++ R Sbjct: 161 LAGETFTLTDLHHIPVIQYLLGTP-TKKLFTERPRVNEWVAEITKR 205
>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1| (Plenty-of-prolines 101) Length = 946 Score = 31.6 bits (70), Expect = 0.99 Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 23/80 (28%) Frame = -3 Query: 453 RRRQVHPRRPLPHAQRR-----PPRLRRAHCPP------------------HPVPQERQP 343 RRR PRR P QRR PP+ R A PP P P++R P Sbjct: 606 RRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSP 665 Query: 342 LVDCRLEPRVLGVRQEPAAP 283 V R P + ++ ++P Sbjct: 666 TVTKRRSPSLSSKHRKGSSP 685
>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1| Length = 888 Score = 31.2 bits (69), Expect = 1.3 Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 21/82 (25%) Frame = -3 Query: 453 RRRQVHPRRPLPHAQRR----------------PPRLRRAHCPPHPVPQERQPLVDCRLE 322 RRR H R P P ++R P R RR+ PP P + R P + R Sbjct: 515 RRRHSHSRSPSPSPRKRQKEPSPRRRRRSPSPPPARRRRSPSPPPPPRRRRSPSLPRRRS 574 Query: 321 PRVLGVRQEP-----AAPVVRR 271 P R+ P + P+ RR Sbjct: 575 PSPPPRRRSPSPRRYSPPIQRR 596
>NAGB_VIBVY (Q7MGE1) Glucosamine-6-phosphate deaminase (EC 3.5.99.6)| (Glucosamine-6-phosphate isomerase) (GNPDA) (GlcN6P deaminase) Length = 266 Score = 31.2 bits (69), Expect = 1.3 Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 4/80 (5%) Frame = +1 Query: 97 HADEEERNVYQIIQNNGKGKDINRNCEAQERKCHGYG----VDGAVGSTFSTAIAHGDQN 264 H D +E N+ + NG +D C+ E K YG G VG+ A Sbjct: 96 HIDIQEENINLL---NGNAEDHEAECQRYEDKIKSYGRINLFMGGVGNDGHIAF----NE 148 Query: 265 GASADDGRCRLLTYTQDPRL 324 AS+ R R+ T T+D R+ Sbjct: 149 PASSLSSRTRIKTLTEDTRI 168
>NAGB_VIBVU (Q8D4T9) Glucosamine-6-phosphate deaminase (EC 3.5.99.6)| (Glucosamine-6-phosphate isomerase) (GNPDA) (GlcN6P deaminase) Length = 266 Score = 31.2 bits (69), Expect = 1.3 Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 4/80 (5%) Frame = +1 Query: 97 HADEEERNVYQIIQNNGKGKDINRNCEAQERKCHGYG----VDGAVGSTFSTAIAHGDQN 264 H D +E N+ + NG +D C+ E K YG G VG+ A Sbjct: 96 HIDIQEENINLL---NGNAEDHEAECQRYEDKIKSYGRINLFMGGVGNDGHIAF----NE 148 Query: 265 GASADDGRCRLLTYTQDPRL 324 AS+ R R+ T T+D R+ Sbjct: 149 PASSLSSRTRIKTLTEDTRI 168
>CLPP_CHLEU (P42379) ATP-dependent Clp protease proteolytic subunit (EC| 3.4.21.92) (Endopeptidase Clp) [Contains: Ceu clpP intein (Insertion IS2)] Length = 1010 Score = 30.4 bits (67), Expect = 2.2 Identities = 31/109 (28%), Positives = 45/109 (41%), Gaps = 3/109 (2%) Frame = +1 Query: 52 NDLSTATAGRQGRNTHADEEERNVYQIIQNNG--KGKDINRNCEAQERKCHGYGVD-GAV 222 ND TA G+Q +EE + V+ II + G G I + Q K + G Sbjct: 358 NDFKTAPRGKQAERAFQEEESKKVFVIINSFGGSVGNGITVHDALQFIKAGSLTLALGVA 417 Query: 223 GSTFSTAIAHGDQNGASADDGRCRLLTYTQDPRLETAVHQRLTFLRDWM 369 S S A+A G +G C ++ + P T+ H LT R W+ Sbjct: 418 ASAASLALAGGTIGERYVTEG-CHVMIH--QPECLTSDHTVLT-TRGWI 462
>GSTH1_ORYSA (O65857) Probable glutathione S-transferase GSTF1 (EC 2.5.1.18)| (GST-I) Length = 219 Score = 30.4 bits (67), Expect = 2.2 Identities = 19/61 (31%), Positives = 27/61 (44%) Frame = -1 Query: 455 LAGDKFTLADLSHMPNADRLASDERTARLIQSRRNVSRWWTAVSSRGSWVYVKSLQRPSS 276 LAGD + ADL+H P A L S +V WW + +R S + ++ P Sbjct: 160 LAGDFVSFADLNHFPYTFYFMGTP-YASLFDSYPHVKAWWERLMARPSVKKLAAVMAPQG 218 Query: 275 A 273 A Sbjct: 219 A 219
>TRIM9_MOUSE (Q8C7M3) Tripartite motif protein 9| Length = 817 Score = 30.0 bits (66), Expect = 2.9 Identities = 25/93 (26%), Positives = 40/93 (43%) Frame = -3 Query: 372 PHPVPQERQPLVDCRLEPRVLGVRQEPAAPVVRRGAILISMRDRRREGAAHSSINTISVA 193 P PVP ER PL R+ P + +P+ P G R + + HSS+ +++ Sbjct: 555 PFPVPSERLPL--RRMSPFSSTLNLQPSFP----GRSYFDFRSSPHQLSLHSSLQSLNA- 607 Query: 192 FPFLRFTVSIDIFALSVVLNNLVYVAFFFIGMG 94 P F ++ V + L+ VA+F G Sbjct: 608 -PGCNFETQSASYSQLVDIKKLLAVAWFAFDPG 639
>SYD_NITWN (Q3SS92) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA| ligase) (AspRS) Length = 590 Score = 30.0 bits (66), Expect = 2.9 Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 1/48 (2%) Frame = -3 Query: 372 PHPVPQERQPLVDCRLEPRVLGVRQEPAAP-VVRRGAILISMRDRRRE 232 P PV E++ D RL+ R L +R+E ++ RGAI+ SMR R +E Sbjct: 111 PLPVFGEQEYPEDIRLKYRFLDLRRENLHQNIMTRGAIVDSMRKRMKE 158
>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2157 Score = 30.0 bits (66), Expect = 2.9 Identities = 19/54 (35%), Positives = 21/54 (38%), Gaps = 2/54 (3%) Frame = -3 Query: 435 PRRP--LPHAQRRPPRLRRAHCPPHPVPQERQPLVDCRLEPRVLGVRQEPAAPV 280 PRRP PH R R PP P+ ER D EP + P PV Sbjct: 1707 PRRPPPAPHDGDRKELPREQPLPPGPIGTERSQRTDRGTEPGPIRPSHRPGPPV 1760
>RL3_GLOVI (Q7NPH0) 50S ribosomal protein L3| Length = 215 Score = 30.0 bits (66), Expect = 2.9 Identities = 16/40 (40%), Positives = 23/40 (57%) Frame = +3 Query: 66 GNSRKAGAKHPCR*RRTQRIPDYSEQRKGQRYQSKL*SAG 185 G+ +KAG + P R R R+PD S+ GQ+ L +AG Sbjct: 67 GHCKKAGLEAPVRHLREFRLPDSSQYTPGQQITVDLFAAG 106
>ROS_HUMAN (P08922) Proto-oncogene tyrosine-protein kinase ROS precursor (EC| 2.7.10.1) (c-ros-1) Length = 2347 Score = 30.0 bits (66), Expect = 2.9 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%) Frame = -1 Query: 431 ADLSHMPNADRLASDERTARLIQSRRNVSRW---WTAVSSRGSWVYVKSLQRPSSAEAP 264 ADL P A + S T R + + ++ W GSW Y K++ RPS P Sbjct: 99 ADLPTAPFASSIGSHNMTLRWKSANFSGVKYIIQWKYAQLLGSWTYTKTVSRPSYVVKP 157
>CUD1_SCHGR (Q7M4F4) Endocuticle structural glycoprotein SgAbd-1| Length = 184 Score = 29.6 bits (65), Expect = 3.8 Identities = 23/75 (30%), Positives = 31/75 (41%) Frame = -3 Query: 450 RRQVHPRRPLPHAQRRPPRLRRAHCPPHPVPQERQPLVDCRLEPRVLGVRQEPAAPVVRR 271 R P RP P A R PP PP PV QPL +P ++ R P A Sbjct: 20 RPSATPVRPSPPASRAPP----PPPPPRPVVPS-QPLPAPAPQPAIVPARTIPQASSDGH 74 Query: 270 GAILISMRDRRREGA 226 I+ +D+ +G+ Sbjct: 75 WIIIKQAKDQANDGS 89
>SYD_RHOPA (Q6N5D6) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA| ligase) (AspRS) Length = 591 Score = 29.6 bits (65), Expect = 3.8 Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Frame = -3 Query: 372 PHPVPQERQPLVDCRLEPRVLGVRQEPAAP-VVRRGAILISMRDRRRE 232 P PV E++ D RL R L +R+E ++ RGAI+ SMR R +E Sbjct: 111 PLPVFGEQEYPEDVRLRYRFLDLRREKLHQNIMTRGAIVDSMRRRMKE 158
>DP87_DICDI (Q04503) Prespore protein DP87 precursor| Length = 555 Score = 29.6 bits (65), Expect = 3.8 Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 5/51 (9%) Frame = -2 Query: 229 CCPQLHQ---HHIRGISVPALHSFD*YLCP--FRCSE*SGIRCVLLHRHGC 92 CCP++ + HH G H D CP F C E G C + H GC Sbjct: 132 CCPRIPRCVGHHGGG------HKCDRMRCPEGFYCEEQGGSACCVPHHDGC 176
>CAN3_CHICK (Q92177) Calpain-3 (EC 3.4.22.-) (Calpain L3) (Calpain p94)| (Calcium-activated neutral proteinase 3) (CANP 3) (Muscle-specific calcium-activated neutral protease 3) Length = 810 Score = 29.3 bits (64), Expect = 4.9 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 2/42 (4%) Frame = +1 Query: 1 KKKTGESIXXXXXXHDSN-DLST-ATAGRQGRNTHADEEERN 120 KKK G+ I +SN +L+T AG+ G TH DE++R+ Sbjct: 588 KKKKGKPIIFVSDRANSNKELTTDEDAGKDGEKTHVDEKKRS 629
>TAF1_HUMAN (P21675) Transcription initiation factor TFIID subunit 1 (EC| 2.7.11.1) (Transcription initiation factor TFIID 250 kDa subunit) (TAF(II)250) (TAFII-250) (TAFII250) (TBP-associated factor 250 kDa) (p250) (Cell cycle gene 1 protein) Length = 1872 Score = 29.3 bits (64), Expect = 4.9 Identities = 14/45 (31%), Positives = 23/45 (51%) Frame = +1 Query: 58 LSTATAGRQGRNTHADEEERNVYQIIQNNGKGKDINRNCEAQERK 192 LST T ++ +E +N+ ++QN ++R E QERK Sbjct: 1083 LSTDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQLSREREEQERK 1127
>VPP_BPPRD (P27391) Protein P (GpP)| Length = 83 Score = 29.3 bits (64), Expect = 4.9 Identities = 11/25 (44%), Positives = 17/25 (68%) Frame = -3 Query: 372 PHPVPQERQPLVDCRLEPRVLGVRQ 298 P P P E PL++ R+E R+ G++Q Sbjct: 16 PGPAPTETMPLLNYRVEGRIAGIQQ 40
>GSTF1_WHEAT (P30110) Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-phi)| Length = 229 Score = 29.3 bits (64), Expect = 4.9 Identities = 15/46 (32%), Positives = 22/46 (47%) Frame = -1 Query: 455 LAGDKFTLADLSHMPNADRLASDERTARLIQSRRNVSRWWTAVSSR 318 LAGD T ADL+H+P + A++ V WW + +R Sbjct: 165 LAGDSITFADLNHIPFTFYFMTTP-YAKVFDDYPKVKAWWEMLMAR 209
>ACRO_RABIT (P48038) Acrosin precursor (EC 3.4.21.10) [Contains: Acrosin light| chain; Acrosin heavy chain] Length = 431 Score = 28.9 bits (63), Expect = 6.4 Identities = 14/32 (43%), Positives = 15/32 (46%) Frame = -3 Query: 438 HPRRPLPHAQRRPPRLRRAHCPPHPVPQERQP 343 HP P PH RPP+ A PP P P P Sbjct: 332 HPH-PHPHPHPRPPQPPAAQAPPPPPPPPPPP 362
>TAF1L_HUMAN (Q8IZX4) Transcription initiation factor TFIID 210 kDa subunit| (TBP-associated factor 210 kDa) (TAF(II)210) (TBP-associated factor 1-like) Length = 1826 Score = 28.9 bits (63), Expect = 6.4 Identities = 14/45 (31%), Positives = 23/45 (51%) Frame = +1 Query: 58 LSTATAGRQGRNTHADEEERNVYQIIQNNGKGKDINRNCEAQERK 192 LST T ++ +E +N+ ++QN ++R E QERK Sbjct: 1102 LSTDTDSISAEDSDFEEMGKNIENMLQNKKTSSQLSREWEEQERK 1146
>NCAP_MUMP1 (P21277) Nucleoprotein (Protein N) (Nucleocapsid protein) (NP| protein) Length = 553 Score = 28.9 bits (63), Expect = 6.4 Identities = 14/44 (31%), Positives = 22/44 (50%) Frame = +2 Query: 110 KNATYTRLFRTTERAKISIETVKRRNGNATDMVLMELWAAPSRR 241 +N TY R F +I +ET +R+ G + V +L P +R Sbjct: 348 RNYTYARPFLNGYYFQIGVETARRQQGTVDNRVADDLGLTPEQR 391
>NAGB_SHIFL (P59688) Glucosamine-6-phosphate deaminase (EC 3.5.99.6)| (Glucosamine-6-phosphate isomerase) (GNPDA) (GlcN6P deaminase) Length = 266 Score = 28.9 bits (63), Expect = 6.4 Identities = 24/80 (30%), Positives = 31/80 (38%), Gaps = 4/80 (5%) Frame = +1 Query: 97 HADEEERNVYQIIQNNGKGKDINRNCEAQERKCHGYG----VDGAVGSTFSTAIAHGDQN 264 H D N+ + NG DI+ C E K YG G VG+ A Sbjct: 96 HVDIPAENINLL---NGNAPDIDAECRQYEEKIRSYGKIHLFMGGVGNDGHIAF----NE 148 Query: 265 GASADDGRCRLLTYTQDPRL 324 AS+ R R+ T T D R+ Sbjct: 149 PASSLASRTRIKTLTHDTRV 168
>NAGB_SALTY (Q8ZQX7) Glucosamine-6-phosphate deaminase (EC 3.5.99.6)| (Glucosamine-6-phosphate isomerase) (GNPDA) (GlcN6P deaminase) Length = 266 Score = 28.9 bits (63), Expect = 6.4 Identities = 24/80 (30%), Positives = 31/80 (38%), Gaps = 4/80 (5%) Frame = +1 Query: 97 HADEEERNVYQIIQNNGKGKDINRNCEAQERKCHGYG----VDGAVGSTFSTAIAHGDQN 264 H D N+ + NG DI+ C E K YG G VG+ A Sbjct: 96 HVDIPAENINLL---NGNAPDIDAECRQYEEKIRSYGKIHLFMGGVGNDGHIAF----NE 148 Query: 265 GASADDGRCRLLTYTQDPRL 324 AS+ R R+ T T D R+ Sbjct: 149 PASSLASRTRIKTLTHDTRV 168
>NAGB_SALTI (Q8Z8G0) Glucosamine-6-phosphate deaminase (EC 3.5.99.6)| (Glucosamine-6-phosphate isomerase) (GNPDA) (GlcN6P deaminase) Length = 266 Score = 28.9 bits (63), Expect = 6.4 Identities = 24/80 (30%), Positives = 31/80 (38%), Gaps = 4/80 (5%) Frame = +1 Query: 97 HADEEERNVYQIIQNNGKGKDINRNCEAQERKCHGYG----VDGAVGSTFSTAIAHGDQN 264 H D N+ + NG DI+ C E K YG G VG+ A Sbjct: 96 HVDIPAENINLL---NGNAPDIDAECRQYEEKIRSYGKIHLFMGGVGNDGHIAF----NE 148 Query: 265 GASADDGRCRLLTYTQDPRL 324 AS+ R R+ T T D R+ Sbjct: 149 PASSLASRTRIKTLTHDTRV 168
>NAGB_ECOLI (P0A759) Glucosamine-6-phosphate deaminase (EC 3.5.99.6)| (Glucosamine-6-phosphate isomerase) (GNPDA) (GlcN6P deaminase) Length = 266 Score = 28.9 bits (63), Expect = 6.4 Identities = 24/80 (30%), Positives = 31/80 (38%), Gaps = 4/80 (5%) Frame = +1 Query: 97 HADEEERNVYQIIQNNGKGKDINRNCEAQERKCHGYG----VDGAVGSTFSTAIAHGDQN 264 H D N+ + NG DI+ C E K YG G VG+ A Sbjct: 96 HVDIPAENINLL---NGNAPDIDAECRQYEEKIRSYGKIHLFMGGVGNDGHIAF----NE 148 Query: 265 GASADDGRCRLLTYTQDPRL 324 AS+ R R+ T T D R+ Sbjct: 149 PASSLASRTRIKTLTHDTRV 168
>NAGB_ECO57 (P0A760) Glucosamine-6-phosphate deaminase (EC 3.5.99.6)| (Glucosamine-6-phosphate isomerase) (GNPDA) (GlcN6P deaminase) Length = 266 Score = 28.9 bits (63), Expect = 6.4 Identities = 24/80 (30%), Positives = 31/80 (38%), Gaps = 4/80 (5%) Frame = +1 Query: 97 HADEEERNVYQIIQNNGKGKDINRNCEAQERKCHGYG----VDGAVGSTFSTAIAHGDQN 264 H D N+ + NG DI+ C E K YG G VG+ A Sbjct: 96 HVDIPAENINLL---NGNAPDIDAECRQYEEKIRSYGKIHLFMGGVGNDGHIAF----NE 148 Query: 265 GASADDGRCRLLTYTQDPRL 324 AS+ R R+ T T D R+ Sbjct: 149 PASSLASRTRIKTLTHDTRV 168
>SRGP1_HUMAN (Q7Z6B7) SLIT-ROBO Rho GTPase-activating protein 1 (srGAP1)| (Rho-GTPase-activating protein 13) Length = 1085 Score = 28.9 bits (63), Expect = 6.4 Identities = 24/74 (32%), Positives = 27/74 (36%) Frame = -3 Query: 420 PHAQRRPPRLRRAHCPPHPVPQERQPLVDCRLEPRVLGVRQEPAAPVVRRGAILISMRDR 241 P RRP R HCP HP VD + P + RG S R Sbjct: 855 PPPVRRPGRTSDGHCPLHPPHALSNSSVDLGSP----SLASHPRGLLQNRGLNNDSPERR 910 Query: 240 RREGAAHSSINTIS 199 RR G H S+ IS Sbjct: 911 RRPG--HGSLTNIS 922
>SRGP1_MOUSE (Q91Z69) SLIT-ROBO Rho GTPase-activating protein 1 (srGAP1)| (Rho-GTPase-activating protein 13) (Fragment) Length = 714 Score = 28.9 bits (63), Expect = 6.4 Identities = 23/74 (31%), Positives = 29/74 (39%) Frame = -3 Query: 420 PHAQRRPPRLRRAHCPPHPVPQERQPLVDCRLEPRVLGVRQEPAAPVVRRGAILISMRDR 241 P RRP R HCP HP L + ++ + P + RG S R Sbjct: 484 PPPGRRPGRTSDGHCPLHP----PHALSNSSIDLGSPNLASHPRGLLQNRGLNNDSPERR 539 Query: 240 RREGAAHSSINTIS 199 RR G H S+ IS Sbjct: 540 RRPG--HGSLTNIS 551
>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2160 Score = 28.9 bits (63), Expect = 6.4 Identities = 19/54 (35%), Positives = 21/54 (38%), Gaps = 2/54 (3%) Frame = -3 Query: 435 PRRP--LPHAQRRPPRLRRAHCPPHPVPQERQPLVDCRLEPRVLGVRQEPAAPV 280 PRRP PH R R PP P+ ER D EP + P PV Sbjct: 1710 PRRPPPAPHDGDRKELPREQPLPPGPIGTERSQRTDRGTEPGPIRPSHLPGPPV 1763
>ASCL2_MOUSE (O35885) Achaete-scute homolog 2 (Mash-2)| Length = 263 Score = 28.9 bits (63), Expect = 6.4 Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 20/83 (24%) Frame = -3 Query: 381 HCPPHPVPQE----------------RQPLVD----CRLEPRVLGVRQEPAAPVVRRGAI 262 H PPHPVP+E L+D RL P GV AA + Sbjct: 39 HFPPHPVPREHFSCAAPELVAGAQGLNASLMDGGALPRLMPTSSGVAGACAARRRQASPE 98 Query: 261 LISMRDRRREGAAHSSINTISVA 193 L+ RRR GA +S ++ +VA Sbjct: 99 LLRCSRRRRSGATEASSSSAAVA 121
>NCAP_MUMPM (P21186) Nucleoprotein (Protein N) (Nucleocapsid protein) (NP| protein) Length = 549 Score = 28.9 bits (63), Expect = 6.4 Identities = 14/44 (31%), Positives = 22/44 (50%) Frame = +2 Query: 110 KNATYTRLFRTTERAKISIETVKRRNGNATDMVLMELWAAPSRR 241 +N TY R F +I +ET +R+ G + V +L P +R Sbjct: 348 RNYTYARPFLNGYYFQIGVETARRQQGTVDNRVADDLGLTPEQR 391
>NCAP_MUMPJ (Q77IS8) Nucleoprotein (Protein N) (Nucleocapsid protein) (NP| protein) Length = 549 Score = 28.9 bits (63), Expect = 6.4 Identities = 14/44 (31%), Positives = 22/44 (50%) Frame = +2 Query: 110 KNATYTRLFRTTERAKISIETVKRRNGNATDMVLMELWAAPSRR 241 +N TY R F +I +ET +R+ G + V +L P +R Sbjct: 348 RNYTYARPFLNGYYFQIGVETARRQQGTVDNRVADDLGLTPEQR 391
>BOSS_DROVI (Q24738) Protein bride of sevenless precursor| Length = 893 Score = 28.9 bits (63), Expect = 6.4 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = -3 Query: 441 VHPRRPLPHAQRRPPRLRRAHCPPHP 364 ++P+RP PH Q+ P R PP P Sbjct: 860 INPQRPPPHPQQSPSRSSVCSLPPSP 885
>NAGB_PASMU (Q9CMF4) Glucosamine-6-phosphate deaminase (EC 3.5.99.6)| (Glucosamine-6-phosphate isomerase) (GNPDA) (GlcN6P deaminase) Length = 267 Score = 28.9 bits (63), Expect = 6.4 Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 4/77 (5%) Frame = +1 Query: 97 HADEEERNVYQIIQNNGKGKDINRNCEAQERKCHGYG----VDGAVGSTFSTAIAHGDQN 264 H D +E+N+ + NG +D + C+ E K YG G VG A Sbjct: 96 HVDIQEKNINIL---NGNTEDHDAECQRYEEKIKSYGKIHLFMGGVGVDGHIAF----NE 148 Query: 265 GASADDGRCRLLTYTQD 315 AS+ R R+ T T+D Sbjct: 149 PASSLSSRTRIKTLTED 165
>CENG1_HUMAN (Q99490) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,| ankyrin repeat and pleckstrin homology domains 2) (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE) (GTP-binding and GTPase activating protein 2) (GGAP2) Length = 1192 Score = 28.5 bits (62), Expect = 8.4 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +3 Query: 267 RLGGRRALQALDVHPGPAARDGSPPAADVP 356 R G + L D+HPGP A GSPP +P Sbjct: 269 RKGKSKTLDNSDLHPGPPA--GSPPPLTLP 296
>ELOA3_HUMAN (Q8NG57) RNA polymerase II transcription factor SIII subunit A3| (Elongin A3) (EloA3) (Transcription elongation factor B polypeptide 3C) Length = 546 Score = 28.5 bits (62), Expect = 8.4 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Frame = -3 Query: 450 RRQVHPRRPL--PHAQRRPPRLRRAHCPPHPVPQERQPLVDCRLEPRVLGVRQEPAAP 283 +++ HPR P P A+R+ PR+ A PH P R P + EPA P Sbjct: 139 QQRPHPRSPSREPRAERKRPRMAPADSGPHRDP-------PTRTAPLPMPEGPEPAVP 189
>NAGB_ECOL6 (Q8FJX7) Glucosamine-6-phosphate deaminase (EC 3.5.99.6)| (Glucosamine-6-phosphate isomerase) (GNPDA) (GlcN6P deaminase) Length = 266 Score = 28.5 bits (62), Expect = 8.4 Identities = 24/80 (30%), Positives = 30/80 (37%), Gaps = 4/80 (5%) Frame = +1 Query: 97 HADEEERNVYQIIQNNGKGKDINRNCEAQERKCHGYG----VDGAVGSTFSTAIAHGDQN 264 H D N+ + NG DI C E K YG G VG+ A Sbjct: 96 HVDIPAENINLL---NGNAPDIEAECRQYEEKIRSYGKIHLFMGGVGNDGHIAF----NE 148 Query: 265 GASADDGRCRLLTYTQDPRL 324 AS+ R R+ T T D R+ Sbjct: 149 PASSLASRTRIKTLTHDTRV 168
>ZIPA_ECO57 (Q8X492) Cell division protein zipA homolog| Length = 328 Score = 28.5 bits (62), Expect = 8.4 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = -3 Query: 435 PRRPLPHAQRRPPRLRRAHCPPHPVPQERQPLVDCRLEPRVLGVRQEPAAPVV 277 PR+P+ ++PP A PP VP+ QP+ +P+ Q+P +P V Sbjct: 101 PRQPV----QQPPE---AQVPPQHVPRPAQPVQQPAYQPQPEQPLQQPVSPQV 146
>SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-associated| protein 49) (SAP 49) (SF3b50) (Pre-mRNA-splicing factor SF3b 49 kDa subunit) Length = 424 Score = 28.5 bits (62), Expect = 8.4 Identities = 19/46 (41%), Positives = 20/46 (43%), Gaps = 5/46 (10%) Frame = -3 Query: 438 HPRRPLPHAQRRPPRLRRAH---CPPHPVP--QERQPLVDCRLEPR 316 HP PH R PP L H PP P P +R PL R PR Sbjct: 364 HPGPMPPHGMRGPPPLMPPHGYTGPPRPPPYGYQRGPLPPPRPTPR 409 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.314 0.130 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,759,812 Number of Sequences: 219361 Number of extensions: 1382038 Number of successful extensions: 4585 Number of sequences better than 10.0: 56 Number of HSP's better than 10.0 without gapping: 4261 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4556 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits)
