ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart26f01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_472904.1| Oryza sativa (japonica cultivar-group), predic... 82 2e-12
2emb|AL606595.4|OSJN00035 Oryza sativa genomic DNA, chromosome 4,... 70 8e-09
3emb|AL606614.3|OSJN00047 Oryza sativa genomic DNA, chromosome 4,... 70 8e-09
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 70 8e-09
5dbj|AK068996.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 8e-09
6gb|AC120181.10| Mus musculus chromosome 12, clone RP24-500I11, c... 44 0.48
7gb|AC125451.7| Mus musculus chromosome 12, clone RP23-41O6, comp... 44 0.48
8gb|AC145797.2| Xenopus tropicalis clone CH216-22B13, complete se... 44 0.48
9gb|AC024759.2| Caenorhabditis elegans cosmid Y37E11AR, complete ... 42 1.9
10gb|AC130279.5| Mus musculus chromosome 1, clone RP24-394G12, com... 42 1.9
11gb|DP000012.1| Macropus eugenii target 1 genomic scaffold 42 1.9
12gb|AC113977.16| Mus musculus chromosome 1, clone RP23-161E13, co... 42 1.9
13emb|BX510922.8| Zebrafish DNA sequence from clone DKEY-50I6 in l... 42 1.9
14gb|AC018929.12| Oryza sativa chromosome 10 BAC OSJNBa0027L23 gen... 42 1.9
15gb|AC021220.7| Homo sapiens BAC clone RP11-530I17 from 4, comple... 42 1.9
16ref|NM_068008.2| Caenorhabditis elegans Y37E11AR.2 (Y37E11AR.2) ... 42 1.9
17dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
18gb|AC145041.3| Macropus eugenii clone ME_KBa-210M21, complete se... 42 1.9
19gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.9
20gb|AC152980.2| Mus musculus 10 BAC RP23-462F3 (Roswell Park Canc... 42 1.9
21ref|NM_123421.2| Arabidopsis thaliana unknown protein AT5G40570 ... 40 7.5
22gb|AC169701.1| Rhesus Macaque BAC CH250-11P19 (Children's Hospi... 40 7.5
23gb|AE017352.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 7.5
24gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 7.5
25gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 7.5
26ref|XM_324138.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.5
27ref|XM_957698.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.5
28ref|XM_955138.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.5
29ref|XM_325531.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.5
30ref|XM_570894.1| Cryptococcus neoformans var. neoformans JEC21 s... 40 7.5
31emb|AL121987.34|HSBA536C5 Human DNA sequence from clone RP11-536... 40 7.5
32emb|BX897677.1| Neurospora crassa DNA linkage group VI BAC clone... 40 7.5
33emb|BX088700.1|CNS09S4S DNA centromeric region sequence from BAC... 40 7.5
34gb|AF421887.1|AF421887S1 Homo sapiens Na,K-ATPase alpha-4 subuni... 40 7.5
35gb|AC096863.5| Genomic sequence for Mus musculus, clone RP23-110... 40 7.5
36gb|AC013737.5| Homo sapiens chromosome 10 clone RP11-313B15, com... 40 7.5
37gb|AC084816.14| Homo sapiens 12p BAC RP11-114G22 (Roswell Park C... 40 7.5
38emb|BX005027.13| Zebrafish DNA sequence from clone DKEY-4C2 in l... 40 7.5
39gb|AC018848.6|AC018848 Arabidopsis thaliana chromosome 1 BAC F5I... 40 7.5
40gb|AC018849.2|AC018849 Arabidopsis thaliana chromosome 1 BAC T21... 40 7.5
41dbj|AB009052.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 7.5
42ref|XM_316829.2| Anopheles gambiae str. PEST ENSANGP00000010396 ... 40 7.5
43gb|AC004263.1|AC004263 Homo sapiens PAC clone 278C19 from 12q, c... 40 7.5
44gb|AC117728.10| Mus musculus chromosome 6, clone RP24-126C21, co... 40 7.5
45emb|AL627322.1|CNS07TIW DNA centromeric region sequence from BAC... 40 7.5 
>ref|XM_472904.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2676

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 61/68 (89%)
 Strand = Plus / Minus

                                                                        
Query: 347  tttttcttccttgtagcanaactacttggtccaacagcttctactgacaatcgctttgtc 406
            ||||||||||||| |||  | |||||||| ||||| ||||||||||||| ||||||||||
Sbjct: 2657 tttttcttccttgaagcgaagctacttgggccaactgcttctactgacagtcgctttgtc 2598

                    
Query: 407  cttgaagc 414
            ||||||||
Sbjct: 2597 cttgaagc 2590



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                     
Query: 499  atccttccccggagaggactcccatcggtctttcccatcatcatcatcccaacgact 555
            ||||||| | ||||||||   |||||||||||| |||||||||||||||||||||||
Sbjct: 2505 atccttcactggagaggaggtccatcggtcttttccatcatcatcatcccaacgact 2449
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>emb|AL606595.4|OSJN00035 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0044K18,
              complete sequence
          Length = 176615

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                          
Query: 347    tttttcttccttgtagcanaactacttggtccaacagcttctactgacaatcgctttgtc 406
              ||||||||||||| |||  | |||||||| ||||| ||||||||||||| ||||||||||
Sbjct: 168937 tttttcttccttgaagcgaagctacttgggccaactgcttctactgacagtcgctttgtc 168878

                
Query: 407    ct 408
              ||
Sbjct: 168877 ct 168876



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                       
Query: 499    atccttccccggagaggactcccatcggtctttcccatcatcatcatcccaacgact 555
              ||||||| | ||||||||   |||||||||||| |||||||||||||||||||||||
Sbjct: 168346 atccttcactggagaggaggtccatcggtcttttccatcatcatcatcccaacgact 168290
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>emb|AL606614.3|OSJN00047 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0011N17,
           complete sequence
          Length = 129498

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                       
Query: 347 tttttcttccttgtagcanaactacttggtccaacagcttctactgacaatcgctttgtc 406
           ||||||||||||| |||  | |||||||| ||||| ||||||||||||| ||||||||||
Sbjct: 943 tttttcttccttgaagcgaagctacttgggccaactgcttctactgacagtcgctttgtc 884

             
Query: 407 ct 408
           ||
Sbjct: 883 ct 882



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                    
Query: 499 atccttccccggagaggactcccatcggtctttcccatcatcatcatcccaacgact 555
           ||||||| | ||||||||   |||||||||||| |||||||||||||||||||||||
Sbjct: 352 atccttcactggagaggaggtccatcggtcttttccatcatcatcatcccaacgact 296
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                            
Query: 347      tttttcttccttgtagcanaactacttggtccaacagcttctactgacaatcgctttgtc 406
                ||||||||||||| |||  | |||||||| ||||| ||||||||||||| ||||||||||
Sbjct: 24003964 tttttcttccttgaagcgaagctacttgggccaactgcttctactgacagtcgctttgtc 24003905

                  
Query: 407      ct 408
                ||
Sbjct: 24003904 ct 24003903



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                         
Query: 499      atccttccccggagaggactcccatcggtctttcccatcatcatcatcccaacgact 555
                ||||||| | ||||||||   |||||||||||| |||||||||||||||||||||||
Sbjct: 24003373 atccttcactggagaggaggtccatcggtcttttccatcatcatcatcccaacgact 24003317
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>dbj|AK068996.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001A15, full
           insert sequence
          Length = 1208

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                       
Query: 347 tttttcttccttgtagcanaactacttggtccaacagcttctactgacaatcgctttgtc 406
           ||||||||||||| |||  | |||||||| ||||| ||||||||||||| ||||||||||
Sbjct: 886 tttttcttccttgaagcgaagctacttgggccaactgcttctactgacagtcgctttgtc 827

             
Query: 407 ct 408
           ||
Sbjct: 826 ct 825



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                    
Query: 499 atccttccccggagaggactcccatcggtctttcccatcatcatcatcccaacgact 555
           ||||||| | ||||||||   |||||||||||| |||||||||||||||||||||||
Sbjct: 731 atccttcactggagaggaggtccatcggtcttttccatcatcatcatcccaacgact 675
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>gb|AC120181.10| Mus musculus chromosome 12, clone RP24-500I11, complete sequence
          Length = 212015

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 215   aaagccacacagggagaacaaa 236
             ||||||||||||||||||||||
Sbjct: 27112 aaagccacacagggagaacaaa 27133
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>gb|AC125451.7| Mus musculus chromosome 12, clone RP23-41O6, complete sequence
          Length = 236838

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 215    aaagccacacagggagaacaaa 236
              ||||||||||||||||||||||
Sbjct: 174549 aaagccacacagggagaacaaa 174570
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>gb|AC145797.2| Xenopus tropicalis clone CH216-22B13, complete sequence
          Length = 142988

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 261   aaatgaagcaccgtgaaaaaag 282
             ||||||||||||||||||||||
Sbjct: 31481 aaatgaagcaccgtgaaaaaag 31460
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>gb|AC024759.2| Caenorhabditis elegans cosmid Y37E11AR, complete sequence
          Length = 31268

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 451  aacatcgtcgtcctcgtcatc 471
            |||||||||||||||||||||
Sbjct: 8428 aacatcgtcgtcctcgtcatc 8448
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>gb|AC130279.5| Mus musculus chromosome 1, clone RP24-394G12, complete sequence
          Length = 207735

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 414    ccagttcctctgacacttcatcatc 438
              ||||||||||||||| |||||||||
Sbjct: 169230 ccagttcctctgacagttcatcatc 169254
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>gb|DP000012.1| Macropus eugenii target 1 genomic scaffold
          Length = 1996640

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 212     cccaaagccacacagggagaa 232
               |||||||||||||||||||||
Sbjct: 1188895 cccaaagccacacagggagaa 1188915
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>gb|AC113977.16| Mus musculus chromosome 1, clone RP23-161E13, complete sequence
          Length = 235738

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 414   ccagttcctctgacacttcatcatc 438
             ||||||||||||||| |||||||||
Sbjct: 26125 ccagttcctctgacagttcatcatc 26149
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>emb|BX510922.8| Zebrafish DNA sequence from clone DKEY-50I6 in linkage group 21,
            complete sequence
          Length = 87532

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 147  cactgagaaaaactaacgaaa 167
            |||||||||||||||||||||
Sbjct: 2412 cactgagaaaaactaacgaaa 2392
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>gb|AC018929.12| Oryza sativa chromosome 10 BAC OSJNBa0027L23 genomic sequence, complete
              sequence
          Length = 143961

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 526    gtctttcccatcatcatcatc 546
              |||||||||||||||||||||
Sbjct: 126726 gtctttcccatcatcatcatc 126746
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>gb|AC021220.7| Homo sapiens BAC clone RP11-530I17 from 4, complete sequence
          Length = 173794

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 65     gaagtatagctatcactgctc 85
              |||||||||||||||||||||
Sbjct: 155943 gaagtatagctatcactgctc 155963
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>ref|NM_068008.2| Caenorhabditis elegans Y37E11AR.2 (Y37E11AR.2) mRNA, complete cds
          Length = 1434

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 451 aacatcgtcgtcctcgtcatc 471
           |||||||||||||||||||||
Sbjct: 45  aacatcgtcgtcctcgtcatc 65
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 526      gtctttcccatcatcatcatc 546
                |||||||||||||||||||||
Sbjct: 22474303 gtctttcccatcatcatcatc 22474323
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>gb|AC145041.3| Macropus eugenii clone ME_KBa-210M21, complete sequence
          Length = 137667

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 212   cccaaagccacacagggagaa 232
             |||||||||||||||||||||
Sbjct: 18520 cccaaagccacacagggagaa 18540
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 526      gtctttcccatcatcatcatc 546
                |||||||||||||||||||||
Sbjct: 22486771 gtctttcccatcatcatcatc 22486791
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>gb|AC152980.2| Mus musculus 10 BAC RP23-462F3 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 165602

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 411   aagccagttcctctgacactt 431
             |||||||||||||||||||||
Sbjct: 65670 aagccagttcctctgacactt 65690
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>ref|NM_123421.2| Arabidopsis thaliana unknown protein AT5G40570 mRNA, complete cds
          Length = 615

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 31/35 (88%)
 Strand = Plus / Minus

                                              
Query: 346 ctttttcttccttgtagcanaactacttggtccaa 380
           |||||||||||| | |||| | |||||||||||||
Sbjct: 591 ctttttcttcctagaagcaaagctacttggtccaa 557
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>gb|AC169701.1| Rhesus Macaque  BAC CH250-11P19 (Children's Hospital Oakland Research
             Institute Rhesus macaque Adult Male BAC Library) complete
             sequence
          Length = 166264

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 66    aagtatagctatcactgctc 85
             ||||||||||||||||||||
Sbjct: 51739 aagtatagctatcactgctc 51720
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>gb|AE017352.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 12, complete
             sequence
          Length = 906719

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   aggctgctcagcacacatca 120
             ||||||||||||||||||||
Sbjct: 29608 aggctgctcagcacacatca 29627
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>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete
             sequence
          Length = 1194300

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   aggctgctcagcacacatca 120
             ||||||||||||||||||||
Sbjct: 33384 aggctgctcagcacacatca 33365
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>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete
              sequence
          Length = 1507550

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 453    catcgtcgtcctcgtcatcg 472
              ||||||||||||||||||||
Sbjct: 947023 catcgtcgtcctcgtcatcg 947004
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>ref|XM_324138.1| Neurospora crassa OR74A hypothetical protein (NCU04782.1) partial
           mRNA
          Length = 3519

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 453 catcgtcgtcctcgtcatcg 472
           ||||||||||||||||||||
Sbjct: 469 catcgtcgtcctcgtcatcg 450
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>ref|XM_957698.1| Neurospora crassa OR74A hypothetical protein (NCU05677.1) partial
           mRNA
          Length = 774

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 453 catcgtcgtcctcgtcatcg 472
           ||||||||||||||||||||
Sbjct: 451 catcgtcgtcctcgtcatcg 432
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>ref|XM_955138.1| Neurospora crassa OR74A hypothetical protein (NCU04782.1) partial
           mRNA
          Length = 3519

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 453 catcgtcgtcctcgtcatcg 472
           ||||||||||||||||||||
Sbjct: 469 catcgtcgtcctcgtcatcg 450
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>ref|XM_325531.1| Neurospora crassa OR74A hypothetical protein (NCU05677.1) partial
           mRNA
          Length = 774

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 453 catcgtcgtcctcgtcatcg 472
           ||||||||||||||||||||
Sbjct: 451 catcgtcgtcctcgtcatcg 432
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>ref|XM_570894.1| Cryptococcus neoformans var. neoformans JEC21 small nuclear
            ribonucleoprotein (CNE03320) partial mRNA
          Length = 1904

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 453  catcgtcgtcctcgtcatcg 472
            ||||||||||||||||||||
Sbjct: 1366 catcgtcgtcctcgtcatcg 1347
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>emb|AL121987.34|HSBA536C5 Human DNA sequence from clone RP11-536C5 on chromosome 1q23.1-24.1
              Contains the 5' end of the KCNJ10 gene for potassium
              inwardly-rectifying channel subfamily J member 10, a novel
              gene, the KCNJ9 gene for potassium inwardly-rectifying
              channel subfamily J member 9, the IGSF8 gene for
              immunoglobulin superfamily member 8, the ATP1A2 gene for
              Na+/K+ transporting ATPase alpha 2 (+) polypeptide, the
              ATP1A4 gene for Na+/K+ transporting ATPase alpha 4 (+)
              polypeptide, the CASQ1 gene for calsequestrin 1
              (fast-twitch, skeletal muscle), a novel gene, the PEA15
              gene for phosphoprotein enriched in astrocytes 15 and four
              CpG islands, complete sequence
          Length = 170834

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 299    agctagcagaatagatcaga 318
              ||||||||||||||||||||
Sbjct: 105578 agctagcagaatagatcaga 105559
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>emb|BX897677.1| Neurospora crassa DNA linkage group VI BAC clone B15B10
          Length = 77986

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 453   catcgtcgtcctcgtcatcg 472
             ||||||||||||||||||||
Sbjct: 27735 catcgtcgtcctcgtcatcg 27754
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>emb|BX088700.1|CNS09S4S DNA centromeric region sequence from BAC DP26B06, DP34F04, DP16D11,
              DP09G08, DP35C12 of chromosome 5  of Podospora anserina
          Length = 322194

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 534    catcatcatcatcccaacga 553
              ||||||||||||||||||||
Sbjct: 225532 catcatcatcatcccaacga 225551
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>gb|AF421887.1|AF421887S1 Homo sapiens Na,K-ATPase alpha-4 subunit (ATP1A4) gene, exons 1 and
           2 and partial cds
          Length = 2953

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 299 agctagcagaatagatcaga 318
           ||||||||||||||||||||
Sbjct: 457 agctagcagaatagatcaga 438
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>gb|AC096863.5| Genomic sequence for Mus musculus, clone RP23-110F14, from chromosome 17,
              complete sequence
          Length = 134001

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 143    acagcactgagaaaaactaa 162
              ||||||||||||||||||||
Sbjct: 113652 acagcactgagaaaaactaa 113671
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>gb|AC013737.5| Homo sapiens chromosome 10 clone RP11-313B15, complete sequence
          Length = 203259

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 527    tctttcccatcatcatcatc 546
              ||||||||||||||||||||
Sbjct: 121808 tctttcccatcatcatcatc 121789
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>gb|AC084816.14| Homo sapiens 12p BAC RP11-114G22 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 148122

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 66    aagtatagctatcactgctc 85
             ||||||||||||||||||||
Sbjct: 10421 aagtatagctatcactgctc 10440
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>emb|BX005027.13| Zebrafish DNA sequence from clone DKEY-4C2 in linkage group 10,
             complete sequence
          Length = 241472

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 526   gtctttcccatcatcatcat 545
             ||||||||||||||||||||
Sbjct: 41023 gtctttcccatcatcatcat 41004
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>gb|AC018848.6|AC018848 Arabidopsis thaliana chromosome 1 BAC F5I6 genomic sequence, complete
             sequence
          Length = 132990

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 527   tctttcccatcatcatcatc 546
             ||||||||||||||||||||
Sbjct: 69119 tctttcccatcatcatcatc 69138
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>gb|AC018849.2|AC018849 Arabidopsis thaliana chromosome 1 BAC T21F11 genomic sequence, complete
             sequence
          Length = 89811

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 527   tctttcccatcatcatcatc 546
             ||||||||||||||||||||
Sbjct: 77031 tctttcccatcatcatcatc 77012
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>dbj|AB009052.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNF13
          Length = 85992

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 31/35 (88%)
 Strand = Plus / Minus

                                                
Query: 346   ctttttcttccttgtagcanaactacttggtccaa 380
             |||||||||||| | |||| | |||||||||||||
Sbjct: 22988 ctttttcttcctagaagcaaagctacttggtccaa 22954
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>ref|XM_316829.2| Anopheles gambiae str. PEST ENSANGP00000010396
           (ENSANGG00000007907), partial mRNA
          Length = 1236

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 453 catcgtcgtcctcgtcatcg 472
           ||||||||||||||||||||
Sbjct: 400 catcgtcgtcctcgtcatcg 381
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>gb|AC004263.1|AC004263 Homo sapiens PAC clone 278C19 from 12q, complete sequence
          Length = 106921

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 212   cccaaagccacacagggagaacaa 235
             |||||||||| |||||||||||||
Sbjct: 49965 cccaaagccagacagggagaacaa 49942
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>gb|AC117728.10| Mus musculus chromosome 6, clone RP24-126C21, complete sequence
          Length = 180605

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 374    ggtccaacagcttctactga 393
              ||||||||||||||||||||
Sbjct: 157581 ggtccaacagcttctactga 157562
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>emb|AL627322.1|CNS07TIW DNA centromeric region sequence from BAC DP35C12 of chromosome 5 of
             Podospora anserina
          Length = 101256

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 534   catcatcatcatcccaacga 553
             ||||||||||||||||||||
Sbjct: 96663 catcatcatcatcccaacga 96644


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,166,104
Number of Sequences: 3902068
Number of extensions: 5166104
Number of successful extensions: 119557
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 119360
Number of HSP's gapped (non-prelim): 197
length of query: 555
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 532
effective length of database: 17,143,297,704
effective search space: 9120234378528
effective search space used: 9120234378528
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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