ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart26e06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF026538.1|AF026538 Hordeum vulgare ABA-responsive protein mRNA, complete cds Length = 1326 Score = 456 bits (230), Expect = e-125 Identities = 239/242 (98%) Strand = Plus / Minus Query: 1 ccgagtaacacaaatataccgtacaagaggtggagaagaatatttgaaggaaattaagaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1287 ccgagtaacacaaatataccgtacaagaggtggagaagaatatttgaaggaaattaagaa 1228 Query: 61 gaacgcgttaaatttcgacaaaagcgtatagacaacaatacataatcacacggacatcca 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1227 gaacgcgttaaatttcgacaaaagcgtatagacaacaatacataatcacacggacatcca 1168 Query: 121 ctacacaagcactcactaaacagatccgcgcaaaaagcagagcacacacacggcaatcaa 180 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1167 ctacacaagcactcactaaacagatccgcgcaaaaagcagagcacaaacacggcaatcaa 1108 Query: 181 aagcagagagccacggacacacgtacacggcggcaatcagccgatcactcgtaggccggt 240 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1107 aagcagagagccacggacacttgtacacggcggcaatcagccgatcactcgtaggccggt 1048 Query: 241 gc 242 || Sbjct: 1047 gc 1046 Score = 238 bits (120), Expect = 1e-59 Identities = 120/120 (100%) Strand = Plus / Minus Query: 357 gacgatgtggatgtacctctcgggcgggctctccttggccgtgacgggctcgacggcggc 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1042 gacgatgtggatgtacctctcgggcgggctctccttggccgtgacgggctcgacggcggc 983 Query: 417 gagcttggcgagcgggatcatgaccttgtagtagctccaggcggtctggccggacggcgc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 982 gagcttggcgagcgggatcatgaccttgtagtagctccaggcggtctggccggacggcgc 923
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 131 bits (66), Expect = 2e-27 Identities = 141/166 (84%) Strand = Plus / Plus Query: 299 gcacggccttgtcgtagctgacgaagcccatgaaccagaagtcgtgcgcgtcgacggtga 358 ||||||||||||| ||||| ||||| ||||||||||||||||| |||| ||| || || | Sbjct: 17504597 gcacggccttgtcatagctaacgaaccccatgaaccagaagtcatgcgagtccaccgtca 17504656 Query: 359 cgatgtggatgtacctctcgggcgggctctccttggccgtgacgggctcgacggcggcga 418 ||| ||| | |||| |||| |||||||||||||| ||| || |||||| ||||||||| Sbjct: 17504657 cgacgtgcacgtacttctccggcgggctctccttcatcgtcaccggctcggcggcggcga 17504716 Query: 419 gcttggcgagcgggatcatgaccttgtagtagctccaggcggtctg 464 |||||| | ||||||||| ||||||||||||||||| || ||||| Sbjct: 17504717 ccttggccaccgggatcatcaccttgtagtagctccacgccgtctg 17504762 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 cgggctcgacggcggcgagc 420 |||||||||||||||||||| Sbjct: 3507279 cgggctcgacggcggcgagc 3507298
>dbj|AK063578.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-H05, full insert sequence Length = 623 Score = 131 bits (66), Expect = 2e-27 Identities = 141/166 (84%) Strand = Plus / Minus Query: 299 gcacggccttgtcgtagctgacgaagcccatgaaccagaagtcgtgcgcgtcgacggtga 358 ||||||||||||| ||||| ||||| ||||||||||||||||| |||| ||| || || | Sbjct: 356 gcacggccttgtcatagctaacgaaccccatgaaccagaagtcatgcgagtccaccgtca 297 Query: 359 cgatgtggatgtacctctcgggcgggctctccttggccgtgacgggctcgacggcggcga 418 ||| ||| | |||| |||| |||||||||||||| ||| || |||||| ||||||||| Sbjct: 296 cgacgtgcacgtacttctccggcgggctctccttcatcgtcaccggctcggcggcggcga 237 Query: 419 gcttggcgagcgggatcatgaccttgtagtagctccaggcggtctg 464 |||||| | ||||||||| ||||||||||||||||| || ||||| Sbjct: 236 ccttggccaccgggatcatcaccttgtagtagctccacgccgtctg 191
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 131 bits (66), Expect = 2e-27 Identities = 141/166 (84%) Strand = Plus / Plus Query: 299 gcacggccttgtcgtagctgacgaagcccatgaaccagaagtcgtgcgcgtcgacggtga 358 ||||||||||||| ||||| ||||| ||||||||||||||||| |||| ||| || || | Sbjct: 17458968 gcacggccttgtcatagctaacgaaccccatgaaccagaagtcatgcgagtccaccgtca 17459027 Query: 359 cgatgtggatgtacctctcgggcgggctctccttggccgtgacgggctcgacggcggcga 418 ||| ||| | |||| |||| |||||||||||||| ||| || |||||| ||||||||| Sbjct: 17459028 cgacgtgcacgtacttctccggcgggctctccttcatcgtcaccggctcggcggcggcga 17459087 Query: 419 gcttggcgagcgggatcatgaccttgtagtagctccaggcggtctg 464 |||||| | ||||||||| ||||||||||||||||| || ||||| Sbjct: 17459088 ccttggccaccgggatcatcaccttgtagtagctccacgccgtctg 17459133 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 cgggctcgacggcggcgagc 420 |||||||||||||||||||| Sbjct: 3507224 cgggctcgacggcggcgagc 3507243
>emb|AL731763.1|CNS07YQA Oryza sativa chromosome 12, . BAC OSJNBa0090O14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 129619 Score = 131 bits (66), Expect = 2e-27 Identities = 141/166 (84%) Strand = Plus / Minus Query: 299 gcacggccttgtcgtagctgacgaagcccatgaaccagaagtcgtgcgcgtcgacggtga 358 ||||||||||||| ||||| ||||| ||||||||||||||||| |||| ||| || || | Sbjct: 27809 gcacggccttgtcatagctaacgaaccccatgaaccagaagtcatgcgagtccaccgtca 27750 Query: 359 cgatgtggatgtacctctcgggcgggctctccttggccgtgacgggctcgacggcggcga 418 ||| ||| | |||| |||| |||||||||||||| ||| || |||||| ||||||||| Sbjct: 27749 cgacgtgcacgtacttctccggcgggctctccttcatcgtcaccggctcggcggcggcga 27690 Query: 419 gcttggcgagcgggatcatgaccttgtagtagctccaggcggtctg 464 |||||| | ||||||||| ||||||||||||||||| || ||||| Sbjct: 27689 ccttggccaccgggatcatcaccttgtagtagctccacgccgtctg 27644
>ref|XM_479184.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1000 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 309 gtcgtagctgacgaagcccatgaaccagaagtc 341 ||||||| ||||||||||||||||||||||||| Sbjct: 690 gtcgtagttgacgaagcccatgaaccagaagtc 658
>ref|XM_506479.1| PREDICTED Oryza sativa (japonica cultivar-group), P0594D10.123 mRNA Length = 1055 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 309 gtcgtagctgacgaagcccatgaaccagaagtc 341 ||||||| ||||||||||||||||||||||||| Sbjct: 746 gtcgtagttgacgaagcccatgaaccagaagtc 714
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 309 gtcgtagctgacgaagcccatgaaccagaagtc 341 ||||||| ||||||||||||||||||||||||| Sbjct: 25625913 gtcgtagttgacgaagcccatgaaccagaagtc 25625881
>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0594D10 Length = 143200 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 309 gtcgtagctgacgaagcccatgaaccagaagtc 341 ||||||| ||||||||||||||||||||||||| Sbjct: 79886 gtcgtagttgacgaagcccatgaaccagaagtc 79854
>dbj|AK071567.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100G12, full insert sequence Length = 1055 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 309 gtcgtagctgacgaagcccatgaaccagaagtc 341 ||||||| ||||||||||||||||||||||||| Sbjct: 746 gtcgtagttgacgaagcccatgaaccagaagtc 714
>dbj|AK059824.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-E06, full insert sequence Length = 1000 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 309 gtcgtagctgacgaagcccatgaaccagaagtc 341 ||||||| ||||||||||||||||||||||||| Sbjct: 690 gtcgtagttgacgaagcccatgaaccagaagtc 658
>ref|XM_466939.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1157 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 312 gtagctgacgaagcccatgaaccagaa 338 ||||||||||||||||||||||||||| Sbjct: 756 gtagctgacgaagcccatgaaccagaa 730
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 312 gtagctgacgaagcccatgaaccagaa 338 ||||||||||||||||||||||||||| Sbjct: 25546596 gtagctgacgaagcccatgaaccagaa 25546622 Score = 44.1 bits (22), Expect = 0.41 Identities = 40/46 (86%) Strand = Plus / Plus Query: 312 gtagctgacgaagcccatgaaccagaagtcgtgcgcgtcgacggtg 357 |||||| ||||| |||||||||||||| ||| | ||||||||||| Sbjct: 25542004 gtagctcacgaatcccatgaaccagaactcgaacccgtcgacggtg 25542049 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 23 acaagaggtggagaagaatatttg 46 ||||||||||||||| |||||||| Sbjct: 20053146 acaagaggtggagaaaaatatttg 20053123 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 gccggtgccggcgccggcgc 254 |||||||||||||||||||| Sbjct: 12108254 gccggtgccggcgccggcgc 12108273
>dbj|AP005513.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0014E22 Length = 157627 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 312 gtagctgacgaagcccatgaaccagaa 338 ||||||||||||||||||||||||||| Sbjct: 16643 gtagctgacgaagcccatgaaccagaa 16669 Score = 44.1 bits (22), Expect = 0.41 Identities = 40/46 (86%) Strand = Plus / Plus Query: 312 gtagctgacgaagcccatgaaccagaagtcgtgcgcgtcgacggtg 357 |||||| ||||| |||||||||||||| ||| | ||||||||||| Sbjct: 12051 gtagctcacgaatcccatgaaccagaactcgaacccgtcgacggtg 12096
>dbj|AP004067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1581_H09 Length = 86699 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 312 gtagctgacgaagcccatgaaccagaa 338 ||||||||||||||||||||||||||| Sbjct: 37995 gtagctgacgaagcccatgaaccagaa 38021 Score = 44.1 bits (22), Expect = 0.41 Identities = 40/46 (86%) Strand = Plus / Plus Query: 312 gtagctgacgaagcccatgaaccagaagtcgtgcgcgtcgacggtg 357 |||||| ||||| |||||||||||||| ||| | ||||||||||| Sbjct: 33403 gtagctcacgaatcccatgaaccagaactcgaacccgtcgacggtg 33448
>dbj|AK069779.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031H22, full insert sequence Length = 1157 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 312 gtagctgacgaagcccatgaaccagaa 338 ||||||||||||||||||||||||||| Sbjct: 756 gtagctgacgaagcccatgaaccagaa 730
>ref|XM_469636.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1239 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 304 gccttgtcgtagctgacgaagcccatgaaccagaagtcgtg 344 |||||||||||| |||||| |||||||||||||| ||||| Sbjct: 911 gccttgtcgtaggagacgaaccccatgaaccagaactcgtg 871
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 304 gccttgtcgtagctgacgaagcccatgaaccagaagtcgtg 344 |||||||||||| |||||| |||||||||||||| ||||| Sbjct: 29906830 gccttgtcgtaggagacgaaccccatgaaccagaactcgtg 29906870 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 234 ggccggtgccggcgccggcgc 254 ||||||||||||||||||||| Sbjct: 31122247 ggccggtgccggcgccggcgc 31122227 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 acgaagcccatgaaccagaa 338 |||||||||||||||||||| Sbjct: 4576213 acgaagcccatgaaccagaa 4576194
>gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa0084L17, complete sequence Length = 159661 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 304 gccttgtcgtagctgacgaagcccatgaaccagaagtcgtg 344 |||||||||||| |||||| |||||||||||||| ||||| Sbjct: 103776 gccttgtcgtaggagacgaaccccatgaaccagaactcgtg 103736
>gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 genomic sequence, complete sequence Length = 139946 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 304 gccttgtcgtagctgacgaagcccatgaaccagaagtcgtg 344 |||||||||||| |||||| |||||||||||||| ||||| Sbjct: 72771 gccttgtcgtaggagacgaaccccatgaaccagaactcgtg 72811
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 304 gccttgtcgtagctgacgaagcccatgaaccagaagtcgtg 344 |||||||||||| |||||| |||||||||||||| ||||| Sbjct: 29998252 gccttgtcgtaggagacgaaccccatgaaccagaactcgtg 29998292 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 234 ggccggtgccggcgccggcgc 254 ||||||||||||||||||||| Sbjct: 31212770 ggccggtgccggcgccggcgc 31212750 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 acgaagcccatgaaccagaa 338 |||||||||||||||||||| Sbjct: 4576328 acgaagcccatgaaccagaa 4576309
>dbj|AK104642.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-F11, full insert sequence Length = 1045 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 304 gccttgtcgtagctgacgaagcccatgaaccagaagtcgtg 344 |||||||||||| |||||| |||||||||||||| ||||| Sbjct: 880 gccttgtcgtaggagacgaaccccatgaaccagaactcgtg 840
>dbj|AK104415.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-F03, full insert sequence Length = 1174 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 304 gccttgtcgtagctgacgaagcccatgaaccagaagtcgtg 344 |||||||||||| |||||| |||||||||||||| ||||| Sbjct: 928 gccttgtcgtaggagacgaaccccatgaaccagaactcgtg 888
>dbj|AK073026.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023144G12, full insert sequence Length = 1210 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 304 gccttgtcgtagctgacgaagcccatgaaccagaagtcgtg 344 |||||||||||| |||||| |||||||||||||| ||||| Sbjct: 882 gccttgtcgtaggagacgaaccccatgaaccagaactcgtg 842
>dbj|AK060947.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-F03, full insert sequence Length = 1226 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 304 gccttgtcgtagctgacgaagcccatgaaccagaagtcgtg 344 |||||||||||| |||||| |||||||||||||| ||||| Sbjct: 927 gccttgtcgtaggagacgaaccccatgaaccagaactcgtg 887
>dbj|AK060219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-E07, full insert sequence Length = 366 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 304 gccttgtcgtagctgacgaagcccatgaaccagaagtcgtg 344 |||||||||||| |||||| |||||||||||||| ||||| Sbjct: 58 gccttgtcgtaggagacgaaccccatgaaccagaactcgtg 18
>gb|BT018477.1| Zea mays clone EL01N0423H08.d mRNA sequence Length = 968 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Minus Query: 303 ggccttgtcgtagctgacgaagcccatgaaccagaa 338 ||||||||||||| | ||||| |||||||||||||| Sbjct: 690 ggccttgtcgtagttcacgaaccccatgaaccagaa 655
>ref|NM_122241.2| Arabidopsis thaliana unknown protein AT5G23350 mRNA, complete cds Length = 1020 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 312 gtagctgacgaagcccatgaaccagaagtcg 342 |||||| ||||| |||||||||||||||||| Sbjct: 792 gtagctcacgaatcccatgaaccagaagtcg 762
>ref|NM_122240.2| Arabidopsis thaliana unknown protein AT5G23340 mRNA, complete cds Length = 2634 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 312 gtagctgacgaagcccatgaaccagaagtcg 342 |||||| ||||| |||||||||||||||||| Sbjct: 1953 gtagctcacgaatcccatgaaccagaagtcg 1983
>dbj|AB007648.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MKD15 Length = 76329 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 312 gtagctgacgaagcccatgaaccagaagtcg 342 |||||| ||||| |||||||||||||||||| Sbjct: 69725 gtagctcacgaatcccatgaaccagaagtcg 69755 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 312 gtagctgacgaagcccatgaaccagaagtc 341 |||||| ||||| ||||||||||||||||| Sbjct: 73527 gtagctcacgaatcccatgaaccagaagtc 73498
>dbj|AK118949.1| Arabidopsis thaliana At5g23350 mRNA for unknown protein, complete cds, clone: RAFL21-29-C05 Length = 1038 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 312 gtagctgacgaagcccatgaaccagaagtcg 342 |||||| ||||| |||||||||||||||||| Sbjct: 695 gtagctcacgaatcccatgaaccagaagtcg 665
>ref|NM_122242.3| Arabidopsis thaliana unknown protein AT5G23360 mRNA, complete cds Length = 958 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 312 gtagctgacgaagcccatgaaccagaagtc 341 |||||| ||||| ||||||||||||||||| Sbjct: 659 gtagctcacgaatcccatgaaccagaagtc 630
>ref|XM_466938.1| Oryza sativa (japonica cultivar-group), mRNA Length = 690 Score = 44.1 bits (22), Expect = 0.41 Identities = 40/46 (86%) Strand = Plus / Minus Query: 312 gtagctgacgaagcccatgaaccagaagtcgtgcgcgtcgacggtg 357 |||||| ||||| |||||||||||||| ||| | ||||||||||| Sbjct: 645 gtagctcacgaatcccatgaaccagaactcgaacccgtcgacggtg 600
>ref|XM_473245.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 702 Score = 44.1 bits (22), Expect = 0.41 Identities = 55/66 (83%) Strand = Plus / Minus Query: 312 gtagctgacgaagcccatgaaccagaagtcgtgcgcgtcgacggtgacgatgtggatgta 371 |||||| ||||| |||||||||||||| ||| |||| || ||||||| ||||||||| Sbjct: 654 gtagctcacgaaccccatgaaccagaactcgaagccgtccaccgtgacgacgtggatgta 595 Query: 372 cctctc 377 | |||| Sbjct: 594 cttctc 589
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 246 cgccggcgcggcgccgtggtgctgcg 271 ||||||||||||||||||| |||||| Sbjct: 420559 cgccggcgcggcgccgtggcgctgcg 420584
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 246 cgccggcgcggcgccgtggtgctgcg 271 ||||||||||||||||||| |||||| Sbjct: 3268127 cgccggcgcggcgccgtggcgctgcg 3268152
>gb|BT011297.1| Arabidopsis thaliana At5g23360 gene, complete cds Length = 633 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 312 gtagctgacgaagcccatgaaccagaagtc 341 |||||| ||||| ||||||||||||||||| Sbjct: 582 gtagctcacgaatcccatgaaccagaagtc 553
>gb|BT010826.1| Arabidopsis thaliana At5g23360 mRNA, complete cds Length = 751 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 312 gtagctgacgaagcccatgaaccagaagtc 341 |||||| ||||| ||||||||||||||||| Sbjct: 607 gtagctcacgaatcccatgaaccagaagtc 578
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 246 cgccggcgcggcgccgtggtgctgcg 271 ||||||||||||||||||| |||||| Sbjct: 2997991 cgccggcgcggcgccgtggcgctgcg 2998016
>emb|AL663019.2|OSJN00221 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0038O10, complete sequence Length = 141545 Score = 44.1 bits (22), Expect = 0.41 Identities = 55/66 (83%) Strand = Plus / Plus Query: 312 gtagctgacgaagcccatgaaccagaagtcgtgcgcgtcgacggtgacgatgtggatgta 371 |||||| ||||| |||||||||||||| ||| |||| || ||||||| ||||||||| Sbjct: 92794 gtagctcacgaaccccatgaaccagaactcgaagccgtccaccgtgacgacgtggatgta 92853 Query: 372 cctctc 377 | |||| Sbjct: 92854 cttctc 92859 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 314 agctgacgaagcccatgaaccagaa 338 |||||||||| |||||||||||||| Sbjct: 97686 agctgacgaatcccatgaaccagaa 97710
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.41 Identities = 55/66 (83%) Strand = Plus / Plus Query: 312 gtagctgacgaagcccatgaaccagaagtcgtgcgcgtcgacggtgacgatgtggatgta 371 |||||| ||||| |||||||||||||| ||| |||| || ||||||| ||||||||| Sbjct: 26316217 gtagctcacgaaccccatgaaccagaactcgaagccgtccaccgtgacgacgtggatgta 26316276 Query: 372 cctctc 377 | |||| Sbjct: 26316277 cttctc 26316282 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 314 agctgacgaagcccatgaaccagaa 338 |||||||||| |||||||||||||| Sbjct: 26321109 agctgacgaatcccatgaaccagaa 26321133 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 gccggtgccggcgccggcgc 254 |||||||||||||||||||| Sbjct: 28388438 gccggtgccggcgccggcgc 28388419 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 gccggtgccggcgccggcgc 254 |||||||||||||||||||| Sbjct: 27169870 gccggtgccggcgccggcgc 27169889
>emb|BX830405.1|CNS0A03A Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB78ZG08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 958 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 312 gtagctgacgaagcccatgaaccagaagtc 341 |||||| ||||| ||||||||||||||||| Sbjct: 659 gtagctcacgaatcccatgaaccagaagtc 630
>dbj|AK061581.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-H09, full insert sequence Length = 1103 Score = 44.1 bits (22), Expect = 0.41 Identities = 55/66 (83%) Strand = Plus / Minus Query: 312 gtagctgacgaagcccatgaaccagaagtcgtgcgcgtcgacggtgacgatgtggatgta 371 |||||| ||||| |||||||||||||| ||| |||| || ||||||| ||||||||| Sbjct: 777 gtagctcacgaaccccatgaaccagaactcgaagccgtccaccgtgacgacgtggatgta 718 Query: 372 cctctc 377 | |||| Sbjct: 717 cttctc 712
>dbj|AB193609.1| Streptomyces sp. NRRL 11266 tetronomycin biosynthetic gene cluster, partial and complete cds Length = 113234 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Plus Query: 235 gccggtgccggcgccggcgcggcgccgtgg 264 ||||| |||||||||||||| ||||||||| Sbjct: 106955 gccggggccggcgccggcgccgcgccgtgg 106984
>ref|XM_469848.1| Oryza sativa (japonica cultivar-group), mRNA Length = 954 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 234 ggccggtgccggcgccggcgc 254 ||||||||||||||||||||| Sbjct: 796 ggccggtgccggcgccggcgc 776
>ref|NM_197527.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0053C23.27), mRNA Length = 816 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 gccggtgccggcgccggcgcggcgc 259 |||| |||||||||||||||||||| Sbjct: 525 gccgctgccggcgccggcgcggcgc 501
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 233 aggccggtgccggcgccggcgcggcgccg 261 ||||||| ||| ||||||||||||||||| Sbjct: 3513411 aggccggggccagcgccggcgcggcgccg 3513439
>ref|XM_473246.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 648 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 314 agctgacgaagcccatgaaccagaa 338 |||||||||| |||||||||||||| Sbjct: 598 agctgacgaatcccatgaaccagaa 574
>gb|AF124045.1| Sorghum bicolor BAC clone 110K5, partial sequence Length = 78195 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 304 gccttgtcgtagctgacgaagcccatgaaccagaagtcgtg 344 ||||| |||||| | ||||| |||||||||||||| ||||| Sbjct: 77011 gccttatcgtagttcacgaaccccatgaaccagaactcgtg 76971
>gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete genome Length = 138390 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 gccggtgccggcgccggcgcggcgc 259 |||||||||||||||||||| |||| Sbjct: 65354 gccggtgccggcgccggcgctgcgc 65378
>emb|AL606488.15| Mouse DNA sequence from clone RP23-90E8 on chromosome 13 Contains part of a novel gene, complete sequence Length = 188423 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 acaagcactcactaaacagat 145 ||||||||||||||||||||| Sbjct: 166093 acaagcactcactaaacagat 166113
>gb|AC092389.4| Oryza sativa chromosome 10 BAC OSJNBa0053C23 genomic sequence, complete sequence Length = 194361 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 gccggtgccggcgccggcgcggcgc 259 |||| |||||||||||||||||||| Sbjct: 145793 gccgctgccggcgccggcgcggcgc 145817
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 ggtgccggcgccggcgcggcg 258 ||||||||||||||||||||| Sbjct: 191962 ggtgccggcgccggcgcggcg 191942
>gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genomic sequence, complete sequence Length = 128017 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 234 ggccggtgccggcgccggcgc 254 ||||||||||||||||||||| Sbjct: 42888 ggccggtgccggcgccggcgc 42868
>gb|S56149.1| thymidine kinase [bovine encephalitis herpesvirus, strain N 569, Genomic, 1053 nt] Length = 1053 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 gccggtgccggcgccggcgcggcgc 259 |||||||||||||||||||| |||| Sbjct: 732 gccggtgccggcgccggcgctgcgc 756
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 gccggtgccggcgccggcgcggcgc 259 |||| |||||||||||||||||||| Sbjct: 20268058 gccgctgccggcgccggcgcggcgc 20268082 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 235 gccggtgccggcgccggcgcggcg 258 ||||||| |||||||||||||||| Sbjct: 11501183 gccggtggcggcgccggcgcggcg 11501206
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 234 ggccggtgccggcgccggcgc 254 ||||||||||||||||||||| Sbjct: 11398582 ggccggtgccggcgccggcgc 11398562 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 gccggtgccggcgccggcgc 254 |||||||||||||||||||| Sbjct: 26955529 gccggtgccggcgccggcgc 26955548 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 235 gccggtgccggcgccggcgcggcg 258 ||||||| |||||||||||||||| Sbjct: 26001690 gccggtggcggcgccggcgcggcg 26001713
>gb|AF342809.1|AF342809 Zea mays tonoplast membrane integral protein ZmTIP3-2 mRNA, complete cds Length = 1156 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 234 ggccggtgccggcgccggcgcggcg 258 |||||| |||||||||||||||||| Sbjct: 915 ggccggcgccggcgccggcgcggcg 939
>dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1386G10 Length = 121827 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 234 ggccggtgccggcgccggcgc 254 ||||||||||||||||||||| Sbjct: 86291 ggccggtgccggcgccggcgc 86271
>dbj|AK105216.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-B04, full insert sequence Length = 1145 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 gccggtgccggcgccggcgcggcgc 259 |||| |||||||||||||||||||| Sbjct: 611 gccgctgccggcgccggcgcggcgc 587
>dbj|AK104433.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-C06, full insert sequence Length = 1054 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 314 agctgacgaagcccatgaaccagaa 338 |||||||||| |||||||||||||| Sbjct: 715 agctgacgaatcccatgaaccagaa 691
>dbj|AK099545.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013033A11, full insert sequence Length = 1073 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 314 agctgacgaagcccatgaaccagaa 338 |||||||||| |||||||||||||| Sbjct: 716 agctgacgaatcccatgaaccagaa 692
>dbj|AK072833.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023136C11, full insert sequence Length = 1476 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 234 ggccggtgccggcgccggcgc 254 ||||||||||||||||||||| Sbjct: 1033 ggccggtgccggcgccggcgc 1013
>dbj|AK070324.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023051E03, full insert sequence Length = 1057 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 314 agctgacgaagcccatgaaccagaa 338 |||||||||| |||||||||||||| Sbjct: 715 agctgacgaatcccatgaaccagaa 691
>dbj|AK064057.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-F06, full insert sequence Length = 1445 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 234 ggccggtgccggcgccggcgc 254 ||||||||||||||||||||| Sbjct: 764 ggccggtgccggcgccggcgc 744
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 ggtgccggcgccggcgcggcg 258 ||||||||||||||||||||| Sbjct: 800858 ggtgccggcgccggcgcggcg 800838 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 gcgcgtcgacggtgacgatg 363 |||||||||||||||||||| Sbjct: 1862573 gcgcgtcgacggtgacgatg 1862592
>dbj|AB078882.1| Triticum aestivum mRNA for alternative oxidase, complete cds Length = 1119 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 234 ggccggtgccggcgccggcgcggcg 258 |||||| |||||||||||||||||| Sbjct: 93 ggccggcgccggcgccggcgcggcg 69
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 gccggtgccggcgccggcgcggcgc 259 |||| |||||||||||||||||||| Sbjct: 20279334 gccgctgccggcgccggcgcggcgc 20279358 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 235 gccggtgccggcgccggcgcggcg 258 ||||||| |||||||||||||||| Sbjct: 11507623 gccggtggcggcgccggcgcggcg 11507646
>gb|AC152944.2| Mus musculus 10 BAC RP23-427I4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 179149 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 atatttgaaggaaattaaga 59 |||||||||||||||||||| Sbjct: 81801 atatttgaaggaaattaaga 81782
>ref|XM_465174.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1812 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 gccggtgccggcgccggcgc 254 |||||||||||||||||||| Sbjct: 1125 gccggtgccggcgccggcgc 1144
>ref|NM_196160.1| Oryza sativa (japonica cultivar-group) putative helix-loop-helix DNA-binding protein (OSJNBa0095C06.11), mRNA Length = 987 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 235 gccggtgccggcgccggcgcggcg 258 ||||||| |||||||||||||||| Sbjct: 673 gccggtggcggcgccggcgcggcg 696
>ref|XM_526693.1| PREDICTED: Pan troglodytes similar to KIAA1816 protein (LOC471311), mRNA Length = 861 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 gccggtgccggcgccggcgc 254 |||||||||||||||||||| Sbjct: 654 gccggtgccggcgccggcgc 635
>ref|NM_191756.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 618 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 235 gccggtgccggcgccggcgcggcg 258 |||| ||||||||||||||||||| Sbjct: 47 gccgctgccggcgccggcgcggcg 24
>ref|NM_187664.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 795 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 acgaagcccatgaaccagaa 338 |||||||||||||||||||| Sbjct: 728 acgaagcccatgaaccagaa 709
>ref|XM_473376.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1377 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 gccggtgccggcgccggcgc 254 |||||||||||||||||||| Sbjct: 80 gccggtgccggcgccggcgc 61
>gb|AC136522.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0037H03, complete sequence Length = 185881 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 gccggtgccggcgccggcgc 254 |||||||||||||||||||| Sbjct: 141168 gccggtgccggcgccggcgc 141149
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 gccggcgcggcgccgtggtg 266 |||||||||||||||||||| Sbjct: 1302810 gccggcgcggcgccgtggtg 1302829
>gb|AC133005.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052C16, complete sequence Length = 137872 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 gccggcgccggcgcggcgcc 260 |||||||||||||||||||| Sbjct: 60202 gccggcgccggcgcggcgcc 60221
>gb|AC119971.8| Mus musculus chromosome 16, clone RP24-480D8, complete sequence Length = 166093 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 aatcaaaagcagagagccac 194 |||||||||||||||||||| Sbjct: 33639 aatcaaaagcagagagccac 33658
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 gcgcgtcgacggtgacgatg 363 |||||||||||||||||||| Sbjct: 2916043 gcgcgtcgacggtgacgatg 2916024
>gb|AC125105.3| Mus musculus BAC clone RP24-220B7 from chromosome 16, complete sequence Length = 153616 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 aatcaaaagcagagagccac 194 |||||||||||||||||||| Sbjct: 70838 aatcaaaagcagagagccac 70819
>gb|BT014196.1| Lycopersicon esculentum clone 133373R, mRNA sequence Length = 1135 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 439 accttgtagtagctccaggc 458 |||||||||||||||||||| Sbjct: 690 accttgtagtagctccaggc 671
>gb|AY343976.1| Brachypodium sylvaticum fascilin-like gene, partial sequence Length = 842 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 gccggtgccggcgccggcgc 254 |||||||||||||||||||| Sbjct: 189 gccggtgccggcgccggcgc 170
>gb|AC109245.11| Mus musculus chromosome 1, clone RP23-344F24, complete sequence Length = 206211 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 aatcaaaagcagagagccac 194 |||||||||||||||||||| Sbjct: 68875 aatcaaaagcagagagccac 68856
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 241 gccggcgccggcgcggcgccgtgg 264 ||||||||| |||||||||||||| Sbjct: 1317986 gccggcgccagcgcggcgccgtgg 1317963
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 tgccggcgccggcgcggcgc 259 |||||||||||||||||||| Sbjct: 4002777 tgccggcgccggcgcggcgc 4002796
>emb|BX640413.1| Bordetella pertussis strain Tohama I, complete genome; segment 3/12 Length = 349028 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 cagaagtcgtgcgcgtcgac 353 |||||||||||||||||||| Sbjct: 294436 cagaagtcgtgcgcgtcgac 294455
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 gcgcgtcgacggtgacgatg 363 |||||||||||||||||||| Sbjct: 1094592 gcgcgtcgacggtgacgatg 1094573
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29 Length = 296500 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 cggcggcgagcttggcgagc 429 |||||||||||||||||||| Sbjct: 2229 cggcggcgagcttggcgagc 2210
>emb|AL606695.3|OSJN00112 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0103I08, complete sequence Length = 140449 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 gccggtgccggcgccggcgc 254 |||||||||||||||||||| Sbjct: 112513 gccggtgccggcgccggcgc 112532
>emb|AL662954.2|OSJN00155 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0005N02, complete sequence Length = 175163 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 gccggtgccggcgccggcgc 254 |||||||||||||||||||| Sbjct: 37113 gccggtgccggcgccggcgc 37094
>emb|AL078635.1|CZA382 Amycolatopsis orientalis cosmid pCZA382 Length = 42369 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 gcgccggcgcggcgccgtgg 264 |||||||||||||||||||| Sbjct: 19452 gcgccggcgcggcgccgtgg 19433
>gb|AC078828.12| Homo sapiens 3 BAC RP11-779P15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172043 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 ttgaaggaaattaagaagaa 63 |||||||||||||||||||| Sbjct: 113794 ttgaaggaaattaagaagaa 113813
>gb|AC151616.2| Emiliania huxleyi clone JGIACCU-13M1, complete sequence Length = 36906 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 235 gccggtgccggcgccggcgcggcg 258 ||||||||||||||||||| |||| Sbjct: 12408 gccggtgccggcgccggcggggcg 12385
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 235 gccggtgccggcgccggcgcggcg 258 ||||||||||| |||||||||||| Sbjct: 568083 gccggtgccggtgccggcgcggcg 568106
>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence Length = 642517 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 gccggtgccggcgccggcgc 254 |||||||||||||||||||| Sbjct: 419382 gccggtgccggcgccggcgc 419401
>gb|AC079935.3| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBa0095C06, from Chromosome 10, complete sequence Length = 156159 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 235 gccggtgccggcgccggcgcggcg 258 ||||||| |||||||||||||||| Sbjct: 85176 gccggtggcggcgccggcgcggcg 85199
>gb|AC099786.2| Homo sapiens chromosome 1 clone RP11-510C10, complete sequence Length = 181443 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 agaagaatatttgaaggaaa 53 |||||||||||||||||||| Sbjct: 35176 agaagaatatttgaaggaaa 35195
>gb|AY756527.1| Nocardia nova strain CIP 104777 65 kDa heat shock protein (hsp65) gene, partial cds Length = 441 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 390 cttggccgtgacgggctcgacggc 413 |||||||||||||| ||||||||| Sbjct: 243 cttggccgtgacggcctcgacggc 220
>gb|S82324.1| calcium/calmodulin-dependent protein kinase homolog|CaM kinase homolog|MCK1 [Zea mays=maize, cv. Merit, root caps, mRNA, 2483 nt] Length = 2483 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 234 ggccggtgccggcgccggcgcggc 257 |||||| ||||||||||||||||| Sbjct: 595 ggccggcgccggcgccggcgcggc 618
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 gtggatgtacctctcgggcg 382 |||||||||||||||||||| Sbjct: 606454 gtggatgtacctctcgggcg 606435
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 235 gccggtgccggcgccggcgcggcg 258 ||||| |||||||||||||||||| Sbjct: 1655424 gccggcgccggcgccggcgcggcg 1655401 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 gcgcgtcgacggtgacgatg 363 |||||||||||||||||||| Sbjct: 689171 gcgcgtcgacggtgacgatg 689152
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 gccggcgccggcgcggcgcc 260 |||||||||||||||||||| Sbjct: 6388808 gccggcgccggcgcggcgcc 6388827
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 gccggtgccggcgccggcgc 254 |||||||||||||||||||| Sbjct: 10756568 gccggtgccggcgccggcgc 10756549
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 235 gccggtgccggcgccggcgcggcg 258 |||| ||||||||||||||||||| Sbjct: 29779104 gccgctgccggcgccggcgcggcg 29779127
>dbj|AP003288.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0683B11 Length = 155955 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 235 gccggtgccggcgccggcgcggcg 258 |||| ||||||||||||||||||| Sbjct: 23199 gccgctgccggcgccggcgcggcg 23222
>dbj|AP003408.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1131B07 Length = 109135 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 235 gccggtgccggcgccggcgcggcg 258 |||| ||||||||||||||||||| Sbjct: 108835 gccgctgccggcgccggcgcggcg 108858
>gb|AF463696.1| Mus musculus strain C57BL/6J cytokine gene cluster, partial sequence Length = 1907 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 aatcaaaagcagagagccac 194 |||||||||||||||||||| Sbjct: 280 aatcaaaagcagagagccac 261
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 gccggtgccggcgccggcgc 254 |||||||||||||||||||| Sbjct: 2309464 gccggtgccggcgccggcgc 2309483 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 cgggctcgacggcggcgagc 420 |||||||||||||||||||| Sbjct: 1978522 cgggctcgacggcggcgagc 1978503
>dbj|AP004744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0065C04 Length = 165270 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 gccggtgccggcgccggcgc 254 |||||||||||||||||||| Sbjct: 79290 gccggtgccggcgccggcgc 79309
>dbj|AP004008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1226_A12 Length = 113025 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 235 gccggtgccggcgccggcgcggcg 258 ||||||| |||||||||||||||| Sbjct: 39548 gccggtggcggcgccggcgcggcg 39571
>dbj|AP003568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0017B12 Length = 157424 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 235 gccggtgccggcgccggcgcggcg 258 ||||||| |||||||||||||||| Sbjct: 156788 gccggtggcggcgccggcgcggcg 156811
>dbj|AP004847.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1298_H07 Length = 106434 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 23 acaagaggtggagaagaatatttg 46 ||||||||||||||| |||||||| Sbjct: 1669 acaagaggtggagaaaaatatttg 1646
>dbj|AP005476.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0026D20 Length = 130634 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 gccggtgccggcgccggcgc 254 |||||||||||||||||||| Sbjct: 56559 gccggtgccggcgccggcgc 56578
>dbj|AK120723.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002I18, full insert sequence Length = 3247 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 gccggtgccggcgccggcgc 254 |||||||||||||||||||| Sbjct: 2416 gccggtgccggcgccggcgc 2397
>gb|AC004000.1|AC004000 Human PAC clone RP3-404F18 from Xq23, complete sequence Length = 128117 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 34 agaagaatatttgaaggaaattaa 57 ||||||| |||||||||||||||| Sbjct: 122989 agaagaaaatttgaaggaaattaa 123012
>dbj|AK068057.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130C18, full insert sequence Length = 1136 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 acgaagcccatgaaccagaa 338 |||||||||||||||||||| Sbjct: 879 acgaagcccatgaaccagaa 860
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 tgacgggctcgacggcggcg 417 |||||||||||||||||||| Sbjct: 3293127 tgacgggctcgacggcggcg 3293146
>dbj|AK064119.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-B10, full insert sequence Length = 1922 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 gccggtgccggcgccggcgc 254 |||||||||||||||||||| Sbjct: 434 gccggtgccggcgccggcgc 415
>dbj|AK063369.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-E01, full insert sequence Length = 1248 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 235 gccggtgccggcgccggcgcggcg 258 |||| ||||||||||||||||||| Sbjct: 109 gccgctgccggcgccggcgcggcg 86
>dbj|AK062869.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-C03, full insert sequence Length = 667 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 235 gccggtgccggcgccggcgcggcg 258 ||||||| |||||||||||||||| Sbjct: 351 gccggtggcggcgccggcgcggcg 374
>dbj|AK058809.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-C09, full insert sequence Length = 1343 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 235 gccggtgccggcgccggcgcggcg 258 ||||||| |||||||||||||||| Sbjct: 827 gccggtggcggcgccggcgcggcg 850
>gb|AY103574.1| Zea mays PCO069490 mRNA sequence Length = 678 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 gccggtgccggcgccggcgc 254 |||||||||||||||||||| Sbjct: 300 gccggtgccggcgccggcgc 281
>dbj|AP003382.3| Homo sapiens genomic DNA, chromosome 11 clone:CTD-2011J21, complete sequence Length = 113284 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 gtatagacaacaatacataa 105 |||||||||||||||||||| Sbjct: 97117 gtatagacaacaatacataa 97098
>dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complete sequence Length = 210614 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 agaagtcgtgcgcgtcgacggtga 358 ||||||||||||||| |||||||| Sbjct: 32830 agaagtcgtgcgcgtggacggtga 32853
>gb|DQ065771.1| Polyangium cellulosum hypothetical protein gene, complete cds; chivosazol biosynthetic gene cluster, complete sequence; and hypothetical protein gene, complete cds Length = 96547 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 235 gccggtgccggcgccggcgcggcgccgt 262 ||||| |||||||||||||| ||||||| Sbjct: 22473 gccggcgccggcgccggcgccgcgccgt 22446
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 235 gccggtgccggcgccggcgcggcg 258 ||||||||||| |||||||||||| Sbjct: 580206 gccggtgccggtgccggcgcggcg 580229
>dbj|AP000817.4| Homo sapiens genomic DNA, chromosome 11q clone:CMB9-21K9, complete sequence Length = 90461 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 gtatagacaacaatacataa 105 |||||||||||||||||||| Sbjct: 10619 gtatagacaacaatacataa 10600
>gb|AF079138.1|AF079138 Streptomyces venezuelae methymycin/pikromycin polyketide synthase gene cluster, complete sequence Length = 37948 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 gccggtgccggcgccggcgc 254 |||||||||||||||||||| Sbjct: 10682 gccggtgccggcgccggcgc 10701
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 gccggcgccggcgcggcgcc 260 |||||||||||||||||||| Sbjct: 6455275 gccggcgccggcgcggcgcc 6455294
>emb|AL606728.3|OSJN00102 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0038F03, complete sequence Length = 136656 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 gccggtgccggcgccggcgc 254 |||||||||||||||||||| Sbjct: 960 gccggtgccggcgccggcgc 979
>emb|AL954825.3|CNS08CD1 Oryza sativa chromosome 12, . BAC OJ2007_H06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 103647 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 cgggctcgacggcggcgagc 420 |||||||||||||||||||| Sbjct: 22207 cgggctcgacggcggcgagc 22226
>emb|AL713902.2|CNS07YQ2 Oryza sativa chromosome 12, . BAC OJ1494_F10 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 116371 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 cgggctcgacggcggcgagc 420 |||||||||||||||||||| Sbjct: 24635 cgggctcgacggcggcgagc 24616
>gb|AC154344.1| Mus musculus BAC clone RP23-226G16 from 16, complete sequence Length = 171340 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 aatcaaaagcagagagccac 194 |||||||||||||||||||| Sbjct: 159284 aatcaaaagcagagagccac 159303
>emb|AL935331.9| Mouse DNA sequence from clone RP24-264J19 on chromosome 2, complete sequence Length = 144436 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 aatcaaaagcagagagccac 194 |||||||||||||||||||| Sbjct: 67231 aatcaaaagcagagagccac 67212
>gb|L16784.1|DVURRF12OR Desulfovibrio vulgaris hmc-operon ORFS 2-6, (rrf1 and rrf2) genes, complete cds Length = 5760 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 gtggatgtacctctcgggcg 382 |||||||||||||||||||| Sbjct: 786 gtggatgtacctctcgggcg 805
>gb|U16732.1|SCU16732 Subterranean clover stunt virus (SCSV3) gene, complete cds Length = 991 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 ttgaaggaaattaagaagaa 63 |||||||||||||||||||| Sbjct: 434 ttgaaggaaattaagaagaa 453
>gb|AC121489.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1217B09, complete sequence Length = 148894 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 acgaagcccatgaaccagaa 338 |||||||||||||||||||| Sbjct: 17168 acgaagcccatgaaccagaa 17149
>dbj|D84507.1|MZECDPKA Zea mays mRNA for CDPK-related protein kinase, partial cds, clone ZmCRK1 Length = 2140 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 234 ggccggtgccggcgccggcgcggc 257 |||||| ||||||||||||||||| Sbjct: 339 ggccggcgccggcgccggcgcggc 362
>dbj|AB051407.1| Burkholderia cepacia choS gene for cholesterol oxidase, complete cds Length = 2400 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 234 ggccggtgccggcgccggcgcggc 257 ||||| |||||||||||||||||| Sbjct: 1700 ggccgatgccggcgccggcgcggc 1723 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,534,046 Number of Sequences: 3902068 Number of extensions: 3534046 Number of successful extensions: 90326 Number of sequences better than 10.0: 140 Number of HSP's better than 10.0 without gapping: 149 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 85044 Number of HSP's gapped (non-prelim): 5255 length of query: 476 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 454 effective length of database: 17,147,199,772 effective search space: 7784828696488 effective search space used: 7784828696488 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
