ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart26e05 |
|---|---|
| Clone Library Name | barley_pub |
>AOX1A_ARATH (Q39219) Alternative oxidase 1a, mitochondrial precursor (EC| 1.-.-.-) Length = 354 Score = 87.4 bits (215), Expect = 2e-17 Identities = 39/47 (82%), Positives = 43/47 (91%) Frame = -3 Query: 463 PANATLKDVVTVVRADEAHHRDVNHFASDVYYQGMELKATPAPIGYH 323 PA+ATL+DVV VVRADEAHHRDVNHFASD++YQG ELK PAPIGYH Sbjct: 308 PADATLRDVVMVVRADEAHHRDVNHFASDIHYQGRELKEAPAPIGYH 354
>AOX1_SAUGU (P22185) Alternative oxidase, mitochondrial precursor (EC 1.-.-.-)| Length = 349 Score = 86.7 bits (213), Expect = 3e-17 Identities = 38/47 (80%), Positives = 43/47 (91%) Frame = -3 Query: 463 PANATLKDVVTVVRADEAHHRDVNHFASDVYYQGMELKATPAPIGYH 323 P +TL+DVVTVVRADEAHHRDVNHFASDV+YQ +ELK TPAP+GYH Sbjct: 303 PQGSTLRDVVTVVRADEAHHRDVNHFASDVHYQDLELKTTPAPLGYH 349
>AOX3_SOYBN (O03376) Alternative oxidase 3, mitochondrial precursor (EC| 1.-.-.-) Length = 326 Score = 86.7 bits (213), Expect = 3e-17 Identities = 38/47 (80%), Positives = 43/47 (91%) Frame = -3 Query: 463 PANATLKDVVTVVRADEAHHRDVNHFASDVYYQGMELKATPAPIGYH 323 P +ATLKDVVTV+RADEAHHRDVNHFASD+++QG ELK PAPIGYH Sbjct: 280 PKDATLKDVVTVIRADEAHHRDVNHFASDIHHQGKELKEAPAPIGYH 326
>AOX1B_ARATH (O23913) Alternative oxidase 1b, mitochondrial precursor (EC| 1.-.-.-) Length = 325 Score = 83.6 bits (205), Expect = 2e-16 Identities = 37/46 (80%), Positives = 42/46 (91%) Frame = -3 Query: 460 ANATLKDVVTVVRADEAHHRDVNHFASDVYYQGMELKATPAPIGYH 323 A+ATL+DVV VVRADEAHHRDVNH+ASD++YQG ELK PAPIGYH Sbjct: 280 ADATLRDVVMVVRADEAHHRDVNHYASDIHYQGRELKEAPAPIGYH 325
>AOX1C_ARATH (O22048) Alternative oxidase 1c, mitochondrial precursor (EC| 1.-.-.-) Length = 329 Score = 83.2 bits (204), Expect = 3e-16 Identities = 37/46 (80%), Positives = 42/46 (91%) Frame = -3 Query: 460 ANATLKDVVTVVRADEAHHRDVNHFASDVYYQGMELKATPAPIGYH 323 A+ATL+DVV VVRADEAHHRDVNH+ASD++YQG ELK PAPIGYH Sbjct: 284 ADATLRDVVMVVRADEAHHRDVNHYASDIHYQGHELKEAPAPIGYH 329
>AOX2_SOYBN (Q41266) Alternative oxidase 2, mitochondrial precursor (EC| 1.-.-.-) Length = 333 Score = 83.2 bits (204), Expect = 3e-16 Identities = 35/47 (74%), Positives = 42/47 (89%) Frame = -3 Query: 463 PANATLKDVVTVVRADEAHHRDVNHFASDVYYQGMELKATPAPIGYH 323 P +A LKDV+TV+RADEAHHRDVNHFASD+++QG EL+ PAPIGYH Sbjct: 287 PKDARLKDVITVIRADEAHHRDVNHFASDIHFQGKELREAPAPIGYH 333
>AOX1_MANIN (Q40294) Alternative oxidase, mitochondrial precursor (EC 1.-.-.-)| Length = 318 Score = 82.8 bits (203), Expect = 4e-16 Identities = 37/47 (78%), Positives = 41/47 (87%) Frame = -3 Query: 463 PANATLKDVVTVVRADEAHHRDVNHFASDVYYQGMELKATPAPIGYH 323 P +ATLKDV+TVVRADEAHHRDVNHFASDV QG EL+ PAP+GYH Sbjct: 272 PKDATLKDVITVVRADEAHHRDVNHFASDVQVQGKELRDAPAPVGYH 318
>AOX1_TOBAC (Q41224) Alternative oxidase 1, mitochondrial precursor (EC| 1.-.-.-) Length = 353 Score = 82.0 bits (201), Expect = 7e-16 Identities = 36/47 (76%), Positives = 42/47 (89%) Frame = -3 Query: 463 PANATLKDVVTVVRADEAHHRDVNHFASDVYYQGMELKATPAPIGYH 323 P ++TL DVV VVRADEAHHRDVNHFASD++YQG +LK +PAPIGYH Sbjct: 307 PKDSTLLDVVLVVRADEAHHRDVNHFASDIHYQGQQLKDSPAPIGYH 353
>AOX2_TOBAC (Q40578) Alternative oxidase 2, mitochondrial precursor (EC| 1.-.-.-) Length = 297 Score = 81.6 bits (200), Expect = 9e-16 Identities = 35/47 (74%), Positives = 42/47 (89%) Frame = -3 Query: 463 PANATLKDVVTVVRADEAHHRDVNHFASDVYYQGMELKATPAPIGYH 323 P ++TL+DVV VVRADEAHHRDVNHFA D++YQG +LK +PAPIGYH Sbjct: 251 PKDSTLRDVVLVVRADEAHHRDVNHFAPDIHYQGQQLKDSPAPIGYH 297
>AOX1_SOYBN (Q07185) Alternative oxidase 1, mitochondrial precursor (EC| 1.-.-.-) Length = 321 Score = 79.7 bits (195), Expect = 3e-15 Identities = 35/47 (74%), Positives = 40/47 (85%) Frame = -3 Query: 463 PANATLKDVVTVVRADEAHHRDVNHFASDVYYQGMELKATPAPIGYH 323 P +TL+DVV VVRADEAHHRDVNHFASD++YQG EL+ APIGYH Sbjct: 275 PPGSTLRDVVMVVRADEAHHRDVNHFASDIHYQGRELREAAAPIGYH 321
>AOX2_ARATH (O22049) Alternative oxidase 2, mitochondrial precursor (EC| 1.-.-.-) Length = 353 Score = 79.3 bits (194), Expect = 4e-15 Identities = 36/47 (76%), Positives = 40/47 (85%) Frame = -3 Query: 463 PANATLKDVVTVVRADEAHHRDVNHFASDVYYQGMELKATPAPIGYH 323 P +ATLKDVVTV+RADEAHHRDVNHFASD+ QG EL+ APIGYH Sbjct: 307 PKDATLKDVVTVIRADEAHHRDVNHFASDIRNQGKELREAAAPIGYH 353
>AOX3_ARATH (Q8LEE7) Alternative oxidase 3, mitochondrial precursor (EC| 1.-.-.-) Length = 318 Score = 78.6 bits (192), Expect = 8e-15 Identities = 33/47 (70%), Positives = 41/47 (87%) Frame = -3 Query: 463 PANATLKDVVTVVRADEAHHRDVNHFASDVYYQGMELKATPAPIGYH 323 P +ATL+DVV V+RADEAHHRD+NH+ASD+ ++G ELK PAPIGYH Sbjct: 272 PKDATLRDVVYVIRADEAHHRDINHYASDIQFKGHELKEAPAPIGYH 318
>AOX_TRYBB (Q26710) Alternative oxidase, mitochondrial precursor (EC 1.-.-.-)| Length = 329 Score = 42.0 bits (97), Expect = 8e-04 Identities = 17/39 (43%), Positives = 27/39 (69%) Frame = -3 Query: 457 NATLKDVVTVVRADEAHHRDVNHFASDVYYQGMELKATP 341 NAT +D++ V+RADEA HR VNH +D++ + ++ P Sbjct: 252 NATFRDLINVIRADEAEHRVVNHTFADMHEKRLQNSVNP 290
>AOX_EMENI (Q9P959) Alternative oxidase, mitochondrial precursor (EC 1.-.-.-)| Length = 354 Score = 36.6 bits (83), Expect = 0.033 Identities = 15/23 (65%), Positives = 19/23 (82%) Frame = -3 Query: 457 NATLKDVVTVVRADEAHHRDVNH 389 N T+KD++ VRADEA HR+VNH Sbjct: 288 NRTMKDLLLYVRADEAKHREVNH 310
>AOX_CRYNV (Q8NKE2) Alternative oxidase, mitochondrial precursor (EC 1.-.-.-)| Length = 401 Score = 36.2 bits (82), Expect = 0.043 Identities = 16/25 (64%), Positives = 20/25 (80%) Frame = -3 Query: 463 PANATLKDVVTVVRADEAHHRDVNH 389 PA+++L DV+ VRADEA HR VNH Sbjct: 319 PASSSLLDVIRAVRADEATHRFVNH 343
>AOX_BLUGR (Q8X1N9) Alternative oxidase, mitochondrial precursor (EC 1.-.-.-)| Length = 358 Score = 35.0 bits (79), Expect = 0.095 Identities = 13/23 (56%), Positives = 19/23 (82%) Frame = -3 Query: 457 NATLKDVVTVVRADEAHHRDVNH 389 N T++D++ +RADEA HR+VNH Sbjct: 292 NRTMRDLLLYIRADEAKHREVNH 314
>AOX_VENIN (Q9P429) Alternative oxidase, mitochondrial precursor (EC 1.-.-.-)| Length = 361 Score = 33.9 bits (76), Expect = 0.21 Identities = 14/21 (66%), Positives = 18/21 (85%) Frame = -3 Query: 451 TLKDVVTVVRADEAHHRDVNH 389 T+KD++ VRADEA HR+VNH Sbjct: 297 TMKDLLLHVRADEAKHREVNH 317
>AOX_NEUCR (Q01355) Alternative oxidase, mitochondrial precursor (EC 1.-.-.-)| (ALTOX) Length = 362 Score = 33.9 bits (76), Expect = 0.21 Identities = 14/26 (53%), Positives = 20/26 (76%) Frame = -3 Query: 451 TLKDVVTVVRADEAHHRDVNHFASDV 374 T+KD++ +RADEA HR VNH S++ Sbjct: 298 TMKDLIHYIRADEAVHRGVNHTLSNL 323
>AOX_GELSS (Q8J1Z2) Alternative oxidase, mitochondrial precursor (EC 1.-.-.-)| Length = 362 Score = 33.9 bits (76), Expect = 0.21 Identities = 14/26 (53%), Positives = 20/26 (76%) Frame = -3 Query: 451 TLKDVVTVVRADEAHHRDVNHFASDV 374 T+KD++ +RADEA HR VNH S++ Sbjct: 298 TMKDLIYYIRADEAVHRGVNHTLSNL 323
>AOX_PODAN (Q9C206) Alternative oxidase, mitochondrial precursor (EC 1.-.-.-)| Length = 363 Score = 33.5 bits (75), Expect = 0.28 Identities = 13/29 (44%), Positives = 22/29 (75%) Frame = -3 Query: 451 TLKDVVTVVRADEAHHRDVNHFASDVYYQ 365 T++D++ +RADEA HR VNH S++ ++ Sbjct: 300 TMRDLILYIRADEAVHRGVNHTLSNLNHK 328
>AOX_BOTCI (Q8NJ59) Alternative oxidase, mitochondrial precursor (EC 1.-.-.-)| Length = 361 Score = 33.1 bits (74), Expect = 0.36 Identities = 12/23 (52%), Positives = 19/23 (82%) Frame = -3 Query: 457 NATLKDVVTVVRADEAHHRDVNH 389 N +++D++ +RADEA HR+VNH Sbjct: 295 NRSMRDLLYYIRADEAKHREVNH 317
>AOX_ASPNG (O74180) Alternative oxidase, mitochondrial precursor (EC 1.-.-.-)| Length = 351 Score = 33.1 bits (74), Expect = 0.36 Identities = 13/21 (61%), Positives = 18/21 (85%) Frame = -3 Query: 451 TLKDVVTVVRADEAHHRDVNH 389 ++KD++ VRADEA HR+VNH Sbjct: 287 SMKDLLLYVRADEAKHREVNH 307
>AOX_PICST (Q9P414) Alternative oxidase, mitochondrial precursor (EC 1.-.-.-)| (SHAM-sensitive terminal oxidase) Length = 357 Score = 32.7 bits (73), Expect = 0.47 Identities = 12/23 (52%), Positives = 19/23 (82%) Frame = -3 Query: 457 NATLKDVVTVVRADEAHHRDVNH 389 N+++ D++ +RADEA HR+VNH Sbjct: 290 NSSMLDLILRIRADEAKHREVNH 312
>AOX2_CANAL (Q9UV71) Alternative oxidase 2, mitochondrial precursor (EC| 1.-.-.-) Length = 365 Score = 32.3 bits (72), Expect = 0.62 Identities = 12/22 (54%), Positives = 18/22 (81%) Frame = -3 Query: 454 ATLKDVVTVVRADEAHHRDVNH 389 ++ KD++ +RADEA HR+VNH Sbjct: 299 SSFKDLILRIRADEAKHREVNH 320
>AOX1_CANAL (O93853) Alternative oxidase 1, mitochondrial precursor (EC| 1.-.-.-) Length = 379 Score = 32.0 bits (71), Expect = 0.81 Identities = 11/22 (50%), Positives = 18/22 (81%) Frame = -3 Query: 454 ATLKDVVTVVRADEAHHRDVNH 389 ++ KD++ +RADEA HR++NH Sbjct: 313 SSFKDLILRIRADEAKHREINH 334
>AOX_YARLI (Q8J0I8) Alternative oxidase, mitochondrial precursor (EC 1.-.-.-)| Length = 353 Score = 31.6 bits (70), Expect = 1.1 Identities = 12/23 (52%), Positives = 18/23 (78%) Frame = -3 Query: 457 NATLKDVVTVVRADEAHHRDVNH 389 + T++D++ VRADEA H +VNH Sbjct: 287 DCTMRDLIQYVRADEAKHCEVNH 309
>AOX_HANAN (Q00912) Alternative oxidase, mitochondrial precursor (EC 1.-.-.-)| Length = 342 Score = 31.6 bits (70), Expect = 1.1 Identities = 11/22 (50%), Positives = 18/22 (81%) Frame = -3 Query: 454 ATLKDVVTVVRADEAHHRDVNH 389 +T +D++ +RADE+ HR+VNH Sbjct: 274 STFRDLIQRIRADESKHREVNH 295
>AOX_AJECA (Q9Y711) Alternative oxidase, mitochondrial precursor (EC 1.-.-.-)| Length = 356 Score = 31.2 bits (69), Expect = 1.4 Identities = 12/21 (57%), Positives = 17/21 (80%) Frame = -3 Query: 451 TLKDVVTVVRADEAHHRDVNH 389 T+ D++ +RADEA HR+VNH Sbjct: 292 TILDLLYYIRADEAKHREVNH 312
>AOX_MONFR (Q96UR9) Alternative oxidase, mitochondrial precursor (EC 1.-.-.-)| (MfAOX1) Length = 358 Score = 31.2 bits (69), Expect = 1.4 Identities = 11/21 (52%), Positives = 18/21 (85%) Frame = -3 Query: 451 TLKDVVTVVRADEAHHRDVNH 389 +++D++ +RADEA HR+VNH Sbjct: 294 SMRDLLYYIRADEAKHREVNH 314
>AOX_MAGGR (O93788) Alternative oxidase, mitochondrial precursor (EC 1.-.-.-)| (MgAOX) (AOXMg) Length = 377 Score = 30.8 bits (68), Expect = 1.8 Identities = 11/21 (52%), Positives = 18/21 (85%) Frame = -3 Query: 451 TLKDVVTVVRADEAHHRDVNH 389 T++D++ +RADEA+HR V+H Sbjct: 291 TMRDLLLYIRADEANHRGVHH 311
>MFP1_ARATH (Q9LW85) MAR binding filament-like protein 1| Length = 726 Score = 30.8 bits (68), Expect = 1.8 Identities = 15/33 (45%), Positives = 20/33 (60%) Frame = +1 Query: 250 PSKRNTHLLGSSSDAKFSRRRPSLSGIRSAPGW 348 PS LL SS+ AKF RRRP+L+ + G+ Sbjct: 32 PSSSQFGLLCSSNVAKFKRRRPTLASLNQEDGY 64
>FIBA_HUMAN (P02671) Fibrinogen alpha chain precursor [Contains: Fibrinopeptide| A] Length = 866 Score = 30.4 bits (67), Expect = 2.3 Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 1/55 (1%) Frame = +1 Query: 187 VTKGATIATSY-TAKEPSFPRKPSKRNTHLLGSSSDAKFSRRRPSLSGIRSAPGW 348 +T+G + TSY T E PR PS + GSS R P SG W Sbjct: 269 ITRGGS--TSYGTGSETESPRNPSSAGSWNSGSSGPGSTGNRNPGSSGTGGTATW 321
>UB2J1_MOUSE (Q9JJZ4) Ubiquitin-conjugating enzyme E2 J1 (EC 6.3.2.19)| (Non-canonical ubiquitin-conjugating enzyme 1) (NCUBE1) Length = 318 Score = 30.0 bits (66), Expect = 3.1 Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 6/50 (12%) Frame = +1 Query: 193 KGATIATSYTAKEPS-----FPRKPSKRNTHLLGSSSDA-KFSRRRPSLS 324 +GAT +TSY A+ PS P +P+ +NT + A + S+RRPS S Sbjct: 219 QGATASTSYGAQNPSGAPLPQPTQPAPKNTSMSPRQRRAQQQSQRRPSTS 268
>KIRR1_RAT (Q6X936) Kin of IRRE-like protein 1 precursor (Kin of irregular| chiasm-like protein 1) (Nephrin-like protein 1) Length = 789 Score = 29.6 bits (65), Expect = 4.0 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Frame = +1 Query: 199 ATIATSYTAKEPS-FPRKPSKRNTHLLGSSSDAKFSRRRPSLSGIRSAPGWPSAP 360 A + Y A P+ F +PS R +H G + +SR S G P PSAP Sbjct: 651 AVLYADYRAPGPTRFDGRPSSRLSHSSGYAQLNTYSRAPASDYGTEPTPSGPSAP 705
>KIRR1_MOUSE (Q80W68) Kin of IRRE-like protein 1 precursor (Kin of irregular| chiasm-like protein 1) (Nephrin-like protein 1) Length = 789 Score = 29.6 bits (65), Expect = 4.0 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Frame = +1 Query: 199 ATIATSYTAKEPS-FPRKPSKRNTHLLGSSSDAKFSRRRPSLSGIRSAPGWPSAP 360 A + Y A P+ F +PS R +H G + +SR S G P PSAP Sbjct: 651 AVLYADYRAPGPTRFDGRPSSRLSHSSGYAQLNTYSRAPASDYGTEPTPSGPSAP 705
>CD63_MOUSE (P41731) CD63 antigen| Length = 237 Score = 29.6 bits (65), Expect = 4.0 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = +3 Query: 96 QIGSSLSEMVVQQYPRYVTDKHTAYFSVLDSYQRSNNC 209 Q+ S ++ QQ Y+ D TA ++LD Q+ NNC Sbjct: 109 QVKSEFNKSFQQQMQNYLKDNKTA--TILDKLQKENNC 144
>PALF_NEUCR (Q7SGZ5) pH-response regulator protein palF/rim-8| Length = 927 Score = 29.3 bits (64), Expect = 5.2 Identities = 16/48 (33%), Positives = 22/48 (45%) Frame = +1 Query: 217 YTAKEPSFPRKPSKRNTHLLGSSSDAKFSRRRPSLSGIRSAPGWPSAP 360 YTA PSFP S H + + ++ RP G + G PS+P Sbjct: 834 YTAGGPSFPSAASGNGGHEEETVPEYTYNNHRPGSVGAVTVVGNPSSP 881
>GAT14_ARATH (Q9FH57) GATA transcription factor 14| Length = 339 Score = 28.9 bits (63), Expect = 6.8 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Frame = +1 Query: 220 TAKEPSFPRKPSKRNTHLLGSSSDAKFS-RRRPSLSGIRSAPGWPSAP 360 T++ P FP+K KR+ + S + +R+ S G++ P W + P Sbjct: 219 TSERPPFPKKHKKRSAESVFSGELQQLQPQRKCSHCGVQKTPQWRAGP 266
>DTX2_MOUSE (Q8R3P2) Protein deltex-2 (Deltex-2) (Deltex2) (mDTX2)| Length = 619 Score = 28.9 bits (63), Expect = 6.8 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 6/49 (12%) Frame = +1 Query: 232 PSFPRKPSKRNTHLLGSSSDAKFSRRRPSLSGIRSAP------GWPSAP 360 P++P + T + + A +PSLSG RSAP W +AP Sbjct: 222 PAYPAPQAPHRTTTVSGAHQAFAPYNKPSLSGARSAPRLNTTNPWAAAP 270
>FCY22_YEAST (Q12119) Purine-cytosine permease FCY22 (PCP FCY22)| (Cytosine/purine transport protein FCY22) (Fluorocytosine resistance protein 22) Length = 530 Score = 28.5 bits (62), Expect = 8.9 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = -3 Query: 448 LKDVVTVVRADEAHHRDVNHFASDVYYQGMELKAT 344 +KD + +R E+ D A+DVYY+G+EL T Sbjct: 12 IKDAGSELRDLESGALDTKSSAADVYYEGVELHRT 46 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,679,210 Number of Sequences: 219361 Number of extensions: 966475 Number of successful extensions: 3508 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 3450 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3508 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
