ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart26e05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AF174004.1|AF174004 Triticum aestivum alternative oxidase mRN... 478 e-132
2dbj|AB078882.1| Triticum aestivum mRNA for alternative oxidase, ... 319 5e-84
3dbj|AK064040.1| Oryza sativa (japonica cultivar-group) cDNA clon... 174 2e-40
4dbj|AB007452.1| Oryza sativa mRNA for alternative oxidase, compl... 174 2e-40
5dbj|AB004864.1| Oryza sativa (japonica cultivar-group) AOX1a mRN... 174 2e-40
6ref|XM_473757.1| Oryza sativa (japonica cultivar-group), predic... 170 3e-39
7gb|AY644465.1| Saccharum officinarum mitochondrial alternative o... 155 2e-34
8gb|AY059647.1| Zea mays alternative oxidase AOX2 precursor (Aox2... 143 6e-31
9gb|AY108791.1| Zea mays PCO108471 mRNA sequence 143 6e-31
10dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 133 6e-28
11dbj|AB004813.1| Oryza sativa (japonica cultivar-group) AOX1b and... 133 6e-28
12emb|AL606683.3|OSJN00089 Oryza sativa genomic DNA, chromosome 4,... 133 6e-28
13dbj|AB189673.1| Dracunculus vulgaris DvAOX mRNA for alternative ... 131 2e-27
14gb|AY644466.1| Saccharum officinarum mitochondrial alternative o... 119 8e-24
15gb|AY485264.1| Zea mays alternative oxidase 1a (Aox1a) gene, com... 117 3e-23
16gb|AY644468.1| Saccharum officinarum mitochondrial alternative o... 113 5e-22
17gb|AY059648.1| Zea mays alternative oxidase AOX3 precursor (Aox3... 113 5e-22
18gb|M60330.1|SURAOX1A S.guttatum aox1 mRNA encoding an alternativ... 101 2e-18
19dbj|AB078883.1| Triticum aestivum mRNA for alternative oxidase, ... 100 8e-18
20ref|XM_473758.1| Oryza sativa (japonica cultivar-group), predic... 98 3e-17
21dbj|AK107376.1| Oryza sativa (japonica cultivar-group) cDNA clon... 98 3e-17
22dbj|AB004865.1| Oryza sativa (japonica cultivar-group) AOX1b mRN... 98 3e-17
23ref|XM_467319.1| Oryza sativa (japonica cultivar-group), mRNA 92 2e-15
24dbj|AB074005.1| Oryza sativa (japonica cultivar-group) mitochond... 92 2e-15
25dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 90 8e-15
26dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic D... 90 8e-15
27dbj|AP003994.3| Oryza sativa (japonica cultivar-group) genomic D... 90 8e-15
28dbj|AB074004.1| Oryza sativa (japonica cultivar-group) mitochond... 90 8e-15
29emb|Z15117.1|SGAOX1G S.guttatum aox1 gene for salicylic acid-ind... 86 1e-13
30dbj|AP004024.3| Oryza sativa (japonica cultivar-group) genomic D... 84 5e-13
31ref|NM_194839.1| Oryza sativa (japonica cultivar-group) putative... 82 2e-12
32gb|AY644467.1| Saccharum officinarum mitochondrial alternative o... 82 2e-12
33gb|AC135423.2| Oryza sativa (japonica cultivar-group) chromosome... 82 2e-12
34gb|AC121364.2| Oryza sativa (japonica cultivar-group) chromosome... 82 2e-12
35dbj|AB097428.1| Oryza sativa (japonica cultivar-group) transposo... 82 2e-12
36dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
37dbj|AB097430.1| Oryza sativa (japonica cultivar-group) transposo... 78 3e-11
38dbj|AB097429.1| Oryza sativa (japonica cultivar-group) transposo... 78 3e-11
39gb|AC074105.3| Oryza sativa chromosome 10 clone OSJNBa0030B02, c... 78 3e-11
40dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 78 3e-11
41dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 78 3e-11
42dbj|AP002854.2| Oryza sativa (japonica cultivar-group) genomic D... 78 3e-11
43gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 78 3e-11
44ref|XM_473445.1| Oryza sativa (japonica cultivar-group), predic... 76 1e-10
45emb|AL606633.3|OSJN00060 Oryza sativa genomic DNA, chromosome 4,... 74 4e-10
46dbj|AB097431.1| Oryza sativa (japonica cultivar-group) transposo... 74 4e-10
47dbj|AB183695.1| Symplocarpus foetidus SfAOX mRNA for skunk cabba... 72 2e-09
48gb|AY059646.1| Zea mays alternative oxidase AOX1 precursor (Aox1... 72 2e-09
49dbj|AB190213.1| Philodendron bipinnatifidum PsAOX mRNA for alter... 72 2e-09
50gb|AF040566.1|AF040566 Zea mays alternative oxidase (Aox) gene, ... 66 1e-07
51gb|AY422689.1| Nicotiana attenuata tissue-type shoot mitochondri... 52 0.002
52gb|AY422688.1| Nicotiana attenuata tissue-type shoot mitochondri... 46 0.10
53gb|AC108501.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.10
54gb|DQ100441.1| Vigna unguiculata mitochondrial alternative oxida... 44 0.40
55gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 44 0.40
56gb|S71335.1| Aox1=alternative oxidase {alternative pathway} [Nic... 44 0.40
57emb|AJ538951.1|NTA538951 Nicotiana tabacum cDNA-AFLP-fragment BT... 44 0.40
58emb|AJ718098.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT3-24-60... 44 0.40
59emb|AJ489270.1|CSA489270 Crocus sativus partial mRNA for alterna... 42 1.6
60gb|AC122451.3| Mus musculus BAC clone RP24-252G15 from 16, compl... 40 6.3
61ref|XM_644660.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 6.3
62emb|CR407594.22| Zebrafish DNA sequence from clone DKEY-122C11 i... 40 6.3
63gb|CP000088.1| Thermobifida fusca YX, complete genome 40 6.3
64gb|AC161457.5| Mus musculus BAC clone RP23-156A3 from chromosome... 40 6.3
65emb|AJ250581.1|STE250581 Streptomyces tendae nikkomycin biosynth... 40 6.3
66emb|AJ250199.1|STE250199 Streptomyces tendae nikkomycin biosynth... 40 6.3
67gb|DQ100440.1| Vigna unguiculata mitochondrial alternative oxida... 40 6.3
68gb|AC093151.2| Homo sapiens chromosome 1 clone RP11-399E6, compl... 40 6.3
69gb|AC013799.6| Homo sapiens, clone RP11-20J1, complete sequence 40 6.3
70gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome 40 6.3
71emb|X79768.1|NTSR1AOX N.tabacum (SR1) aox mRNA 40 6.3
72dbj|AB055060.1| Catharanthus roseus gene for alternative oxidase... 40 6.3

>gb|AF174004.1|AF174004 Triticum aestivum alternative oxidase mRNA, partial cds; nuclear gene
            for mitochondrial product
          Length = 1100

 Score =  478 bits (241), Expect = e-132
 Identities = 359/392 (91%), Gaps = 16/392 (4%)
 Strand = Plus / Minus

                                                                        
Query: 86   tggcgtaagccaaataggttcatctttga--gcgaaatggtggttcaacaatatcctag- 142
            ||||||| |||||||||||||||||| ||  |||||| ||||||||||||||||||||  
Sbjct: 1069 tggcgtacgccaaataggttcatcttagatagcgaaacggtggttcaacaatatcctaat 1010

                                                                        
Query: 143  atacgtaactgacaagcacactgcttatttctcagtactcgatagttaccaaaggagcaa 202
            ||||| ||||||||||||||||| |||||||||||||||  |||||||||||||||||||
Sbjct: 1009 atacgcaactgacaagcacactgattatttctcagtactgaatagttaccaaaggagcaa 950

                                                                        
Query: 203  caattgcgacatcctatacagctaaaga--gccctcatttcctcggaagccttc-aaaac 259
            ||||||| ||||||||||||||||||||  || ||||||||||| |   ||||| |||||
Sbjct: 949  caattgcaacatcctatacagctaaagatagctctcatttcctctg---ccttccaaaac 893

                                                                        
Query: 260  gaaacactcatttgcttggtagtagtag------cgatgcaaaattcagcagaagacggc 313
            |||||||||||||||||||| |||||||      |||||||||| ||||||||| |||||
Sbjct: 892  gaaacactcatttgcttggtggtagtagtagcagcgatgcaaaactcagcagaacacggc 833

                                                                        
Query: 314  caagcctcagtggtatccgatcggcgccggggtggccttcagctccataccctggtagta 373
            || |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 832  ca-gcctcagtggtatccgatcggcgctggggtggccttcagctgcataccctggtagta 774

                                                                        
Query: 374  cacgtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggt 433
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773  cacgtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggt 714

                                            
Query: 434  gaccacgtccttgagggtggcgttggccggga 465
            ||||||||||||||||||||||||||| ||||
Sbjct: 713  gaccacgtccttgagggtggcgttggcaggga 682



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>dbj|AB078882.1| Triticum aestivum mRNA for alternative oxidase, complete cds
          Length = 1119

 Score =  319 bits (161), Expect = 5e-84
 Identities = 206/221 (93%), Gaps = 10/221 (4%)
 Strand = Plus / Minus

                                                                        
Query: 254  caaaacgaaacactcatttgcttggt---------agtagtagcgatgcaaaattcagca 304
            ||||||||||||||||||||||||||         |||||||||| ||||||||||||||
Sbjct: 1096 caaaacgaaacactcatttgcttggtggtagtagcagtagtagcgttgcaaaattcagca 1037

                                                                        
Query: 305  gaagacggccaagcctcagtggtatccgatcggcgccggggtggccttcagctccatacc 364
            ||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1036 gaacacggcca-gcctcagtggtatccgatcggcgccggggtggccttcagctgcatacc 978

                                                                        
Query: 365  ctggtagtacacgtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcg 424
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977  ctggtagtacacgtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcg 918

                                                     
Query: 425  caccacggtgaccacgtccttgagggtggcgttggccggga 465
             ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 917  gaccacggtgaccacgtccttgagggtggcgttggcaggga 877



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>dbj|AK064040.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-C12, full
            insert sequence
          Length = 1471

 Score =  174 bits (88), Expect = 2e-40
 Identities = 133/148 (89%)
 Strand = Plus / Minus

                                                                        
Query: 318  cctcagtggtatccgatcggcgccggggtggccttcagctccataccctggtagtacacg 377
            |||||||| |||||||||||||| |||||   |||||||||||| |||||||| |  | |
Sbjct: 1104 cctcagtgatatccgatcggcgcaggggtctgcttcagctccatgccctggtaatggatg 1045

                                                                        
Query: 378  tccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacc 437
            |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| 
Sbjct: 1044 tccgatgcgaagtgattgacgtcgcggtggtgagcctcgtcggcgcgcacgacggtgacg 985

                                        
Query: 438  acgtccttgagggtggcgttggccggga 465
            ||||||||||| ||||||||||| ||||
Sbjct: 984  acgtccttgagcgtggcgttggcgggga 957



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 213  atcctatacagctaaagagccctcattt 240
            |||| ||||||||||||||| |||||||
Sbjct: 1207 atccgatacagctaaagagctctcattt 1180



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>dbj|AB007452.1| Oryza sativa mRNA for alternative oxidase, complete cds
          Length = 1256

 Score =  174 bits (88), Expect = 2e-40
 Identities = 133/148 (89%)
 Strand = Plus / Minus

                                                                        
Query: 318  cctcagtggtatccgatcggcgccggggtggccttcagctccataccctggtagtacacg 377
            |||||||| |||||||||||||| |||||   |||||||||||| |||||||| |  | |
Sbjct: 1085 cctcagtgatatccgatcggcgcaggggtctgcttcagctccatgccctggtaatggatg 1026

                                                                        
Query: 378  tccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacc 437
            |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| 
Sbjct: 1025 tccgatgcgaagtgattgacgtcgcggtggtgagcctcgtcggcgcgcacgacggtgacg 966

                                        
Query: 438  acgtccttgagggtggcgttggccggga 465
            ||||||||||| ||||||||||| ||||
Sbjct: 965  acgtccttgagcgtggcgttggcgggga 938



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 213  atcctatacagctaaagagccctcattt 240
            |||| ||||||||||||||| |||||||
Sbjct: 1188 atccgatacagctaaagagctctcattt 1161



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>dbj|AB004864.1| Oryza sativa (japonica cultivar-group) AOX1a mRNA for alternative
            oxidase, complete cds
          Length = 1459

 Score =  174 bits (88), Expect = 2e-40
 Identities = 133/148 (89%)
 Strand = Plus / Minus

                                                                        
Query: 318  cctcagtggtatccgatcggcgccggggtggccttcagctccataccctggtagtacacg 377
            |||||||| |||||||||||||| |||||   |||||||||||| |||||||| |  | |
Sbjct: 1092 cctcagtgatatccgatcggcgcaggggtctgcttcagctccatgccctggtaatggatg 1033

                                                                        
Query: 378  tccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacc 437
            |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| 
Sbjct: 1032 tccgatgcgaagtgattgacgtcgcggtggtgagcctcgtcggcgcgcacgacggtgacg 973

                                        
Query: 438  acgtccttgagggtggcgttggccggga 465
            ||||||||||| ||||||||||| ||||
Sbjct: 972  acgtccttgagcgtggcgttggcgggga 945



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 213  atcctatacagctaaagagccctcattt 240
            |||| ||||||||||||||| |||||||
Sbjct: 1195 atccgatacagctaaagagctctcattt 1168



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>ref|XM_473757.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 999

 Score =  170 bits (86), Expect = 3e-39
 Identities = 131/146 (89%)
 Strand = Plus / Minus

                                                                       
Query: 320 tcagtggtatccgatcggcgccggggtggccttcagctccataccctggtagtacacgtc 379
           |||||| |||||||||||||| |||||   |||||||||||| |||||||| |  | |||
Sbjct: 999 tcagtgatatccgatcggcgcaggggtctgcttcagctccatgccctggtaatggatgtc 940

                                                                       
Query: 380 cgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgaccac 439
           |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 939 cgatgcgaagtgattgacgtcgcggtggtgagcctcgtcggcgcgcacgacggtgacgac 880

                                     
Query: 440 gtccttgagggtggcgttggccggga 465
           ||||||||| ||||||||||| ||||
Sbjct: 879 gtccttgagcgtggcgttggcgggga 854



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>gb|AY644465.1| Saccharum officinarum mitochondrial alternative oxidase 1 mRNA,
            complete cds; nuclear gene for mitochondrial product
          Length = 1316

 Score =  155 bits (78), Expect = 2e-34
 Identities = 126/142 (88%)
 Strand = Plus / Minus

                                                                        
Query: 316  agcctcagtggtatccgatcggcgccggggtggccttcagctccataccctggtagtaca 375
            ||||||||||||||||||||||||| ||||    |||||||| ||| |||||| | |  |
Sbjct: 1096 agcctcagtggtatccgatcggcgcaggggactgcttcagctgcatgccctggcaatgga 1037

                                                                        
Query: 376  cgtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtga 435
             ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1036 tgtccgatgcaaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcacgacggtga 977

                                  
Query: 436  ccacgtccttgagggtggcgtt 457
            | ||||||||||| ||||||||
Sbjct: 976  cgacgtccttgagcgtggcgtt 955



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>gb|AY059647.1| Zea mays alternative oxidase AOX2 precursor (Aox2) mRNA, nuclear gene
            encoding mitochondrial protein, complete cds~~
          Length = 1456

 Score =  143 bits (72), Expect = 6e-31
 Identities = 123/140 (87%)
 Strand = Plus / Minus

                                                                        
Query: 318  cctcagtggtatccgatcggcgccggggtggccttcagctccataccctggtagtacacg 377
            ||||||||||||||||||||||| ||||    |||||||| ||| |||||| | |  | |
Sbjct: 1099 cctcagtggtatccgatcggcgcaggggactgcttcagctgcattccctggcaatggatg 1040

                                                                        
Query: 378  tccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacc 437
            |||||||| |||||||||||||||||||||||||||||||||||||| || |||||||| 
Sbjct: 1039 tccgatgcaaagtggttgacgtcgcggtggtgagcctcgtcggcgcggacgacggtgact 980

                                
Query: 438  acgtccttgagggtggcgtt 457
            ||||||||||| ||||||||
Sbjct: 979  acgtccttgagcgtggcgtt 960



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>gb|AY108791.1| Zea mays PCO108471 mRNA sequence
          Length = 1415

 Score =  143 bits (72), Expect = 6e-31
 Identities = 123/140 (87%)
 Strand = Plus / Minus

                                                                        
Query: 318  cctcagtggtatccgatcggcgccggggtggccttcagctccataccctggtagtacacg 377
            ||||||||||||||||||||||| ||||    |||||||| ||| |||||| | |  | |
Sbjct: 1113 cctcagtggtatccgatcggcgcaggggactgcttcagctgcattccctggcaatggatg 1054

                                                                        
Query: 378  tccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacc 437
            |||||||| |||||||||||||||||||||||||||||||||||||| || |||||||| 
Sbjct: 1053 tccgatgcaaagtggttgacgtcgcggtggtgagcctcgtcggcgcggacgacggtgact 994

                                
Query: 438  acgtccttgagggtggcgtt 457
            ||||||||||| ||||||||
Sbjct: 993  acgtccttgagcgtggcgtt 974



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  133 bits (67), Expect = 6e-28
 Identities = 82/87 (94%)
 Strand = Plus / Plus

                                                                            
Query: 379      ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 438
                ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 30321728 ccgatgcgaagtgattgacgtcgcggtggtgagcctcgtcggcgcgcacgacggtgacga 30321787

                                           
Query: 439      cgtccttgagggtggcgttggccggga 465
                |||||||||| ||||||||||| ||||
Sbjct: 30321788 cgtccttgagcgtggcgttggcgggga 30321814



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 77/87 (88%)
 Strand = Plus / Plus

                                                                            
Query: 379      ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 438
                |||||||||| ||||||| |||||||||||| |||||||||||||| |  |||||||| |
Sbjct: 30325836 ccgatgcgaaatggttgaggtcgcggtggtgcgcctcgtcggcgcggatgacggtgacga 30325895

                                           
Query: 439      cgtccttgagggtggcgttggccggga 465
                |||||||||| ||||||| ||| ||||
Sbjct: 30325896 cgtccttgagcgtggcgtcggcgggga 30325922



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                            
Query: 379      ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 438
                |||||||||| |||||||||||||||||||| ||||||||||| || || ||   ||| |
Sbjct: 27704187 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcgtcggcacgaacaacaacgacga 27704128

                                 
Query: 439      cgtccttgagggtggcg 455
                |||||||||| ||||||
Sbjct: 27704127 cgtccttgagcgtggcg 27704111



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                     
Query: 318      cctcagtggtatccgatcggcgccggggtggccttcagctccataccctggta 370
                |||||||| |||||||||||||| |||||   |||||||||||| ||||||||
Sbjct: 30321565 cctcagtgatatccgatcggcgcaggggtctgcttcagctccatgccctggta 30321617



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 213      atcctatacagctaaagagccctcattt 240
                |||| ||||||||||||||| |||||||
Sbjct: 30321462 atccgatacagctaaagagctctcattt 30321489



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>dbj|AB004813.1| Oryza sativa (japonica cultivar-group) AOX1b and AOX1a genes,
            complete cds
          Length = 7421

 Score =  133 bits (67), Expect = 6e-28
 Identities = 82/87 (94%)
 Strand = Plus / Minus

                                                                        
Query: 379  ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 438
            ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 6561 ccgatgcgaagtgattgacgtcgcggtggtgagcctcgtcggcgcgcacgacggtgacga 6502

                                       
Query: 439  cgtccttgagggtggcgttggccggga 465
            |||||||||| ||||||||||| ||||
Sbjct: 6501 cgtccttgagcgtggcgttggcgggga 6475



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 77/87 (88%)
 Strand = Plus / Minus

                                                                        
Query: 379  ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 438
            |||||||||| ||||||| |||||||||||| |||||||||||||| |  |||||||| |
Sbjct: 2453 ccgatgcgaaatggttgaggtcgcggtggtgcgcctcgtcggcgcggatgacggtgacga 2394

                                       
Query: 439  cgtccttgagggtggcgttggccggga 465
            |||||||||| ||||||| ||| ||||
Sbjct: 2393 cgtccttgagcgtggcgtcggcgggga 2367



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                 
Query: 318  cctcagtggtatccgatcggcgccggggtggccttcagctccataccctggta 370
            |||||||| |||||||||||||| |||||   |||||||||||| ||||||||
Sbjct: 6724 cctcagtgatatccgatcggcgcaggggtctgcttcagctccatgccctggta 6672



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 213  atcctatacagctaaagagccctcattt 240
            |||| ||||||||||||||| |||||||
Sbjct: 6827 atccgatacagctaaagagctctcattt 6800



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>emb|AL606683.3|OSJN00089 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083N12,
             complete sequence
          Length = 160989

 Score =  133 bits (67), Expect = 6e-28
 Identities = 82/87 (94%)
 Strand = Plus / Plus

                                                                         
Query: 379   ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 438
             ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 71624 ccgatgcgaagtgattgacgtcgcggtggtgagcctcgtcggcgcgcacgacggtgacga 71683

                                        
Query: 439   cgtccttgagggtggcgttggccggga 465
             |||||||||| ||||||||||| ||||
Sbjct: 71684 cgtccttgagcgtggcgttggcgggga 71710



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 77/87 (88%)
 Strand = Plus / Plus

                                                                         
Query: 379   ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 438
             |||||||||| ||||||| |||||||||||| |||||||||||||| |  |||||||| |
Sbjct: 75732 ccgatgcgaaatggttgaggtcgcggtggtgcgcctcgtcggcgcggatgacggtgacga 75791

                                        
Query: 439   cgtccttgagggtggcgttggccggga 465
             |||||||||| ||||||| ||| ||||
Sbjct: 75792 cgtccttgagcgtggcgtcggcgggga 75818



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                  
Query: 318   cctcagtggtatccgatcggcgccggggtggccttcagctccataccctggta 370
             |||||||| |||||||||||||| |||||   |||||||||||| ||||||||
Sbjct: 71461 cctcagtgatatccgatcggcgcaggggtctgcttcagctccatgccctggta 71513



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 213   atcctatacagctaaagagccctcattt 240
             |||| ||||||||||||||| |||||||
Sbjct: 71358 atccgatacagctaaagagctctcattt 71385



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>dbj|AB189673.1| Dracunculus vulgaris DvAOX mRNA for alternative oxidase, complete cds
          Length = 1372

 Score =  131 bits (66), Expect = 2e-27
 Identities = 111/126 (88%)
 Strand = Plus / Minus

                                                                        
Query: 317  gcctcagtggtatccgatcggcgccggggtggccttcagctccataccctggtagtacac 376
            |||||||||||| |||| ||||||||| || | ||||||||| | |||||||||||  ||
Sbjct: 1153 gcctcagtggtacccgagcggcgccggcgtcgtcttcagctcaagaccctggtagtggac 1094

                                                                        
Query: 377  gtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgac 436
            ||| || |||||||||||||||||||||||||| |||||||||||||| || ||||||||
Sbjct: 1093 gtcggaggcgaagtggttgacgtcgcggtggtgtgcctcgtcggcgcggacgacggtgac 1034

                  
Query: 437  cacgtc 442
             |||||
Sbjct: 1033 gacgtc 1028



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>gb|AY644466.1| Saccharum officinarum mitochondrial alternative oxidase 1b mRNA,
           complete cds; nuclear gene for mitochondrial product
          Length = 989

 Score =  119 bits (60), Expect = 8e-24
 Identities = 123/144 (85%)
 Strand = Plus / Minus

                                                                       
Query: 322 agtggtatccgatcggcgccggggtggccttcagctccataccctggtagtacacgtccg 381
           ||||||| ||||  ||||| || ||| ||||||||| ||| |||||||| |  | |||||
Sbjct: 875 agtggtacccgagaggcgcaggcgtgtccttcagcttcatcccctggtaatgaatgtccg 816

                                                                       
Query: 382 atgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgaccacgt 441
           |||||||||||||||| ||||||||||| ||||||||||||||||| | |||||| ||||
Sbjct: 815 atgcgaagtggttgacatcgcggtggtgcgcctcgtcggcgcgcacgatggtgacgacgt 756

                                   
Query: 442 ccttgagggtggcgttggccggga 465
           |||||||  |||||| ||| ||||
Sbjct: 755 ccttgagcttggcgtcggcgggga 732



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>gb|AY485264.1| Zea mays alternative oxidase 1a (Aox1a) gene, complete cds
          Length = 3361

 Score =  117 bits (59), Expect = 3e-23
 Identities = 74/79 (93%)
 Strand = Plus / Minus

                                                                        
Query: 379  ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 438
            ||||||| |||||||||||||||||||||||||||||||||||||| || |||||||| |
Sbjct: 2887 ccgatgcaaagtggttgacgtcgcggtggtgagcctcgtcggcgcggacgacggtgacta 2828

                               
Query: 439  cgtccttgagggtggcgtt 457
            |||||||||| ||||||||
Sbjct: 2827 cgtccttgagcgtggcgtt 2809



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 318  cctcagtggtatccgatcggcgccgggg 345
            ||||||||||||||||||||||| ||||
Sbjct: 3050 cctcagtggtatccgatcggcgcagggg 3023



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>gb|AY644468.1| Saccharum officinarum mitochondrial alternative oxidase 1d mRNA,
           complete cds; nuclear gene for mitochondrial product
          Length = 1108

 Score =  113 bits (57), Expect = 5e-22
 Identities = 81/89 (91%)
 Strand = Plus / Minus

                                                                       
Query: 377 gtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgac 436
           |||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 823 gtccgacgcgaagtggttgacgtcgcggtggtgcgcctcgtcggcgcgcacgacggtgac 764

                                        
Query: 437 cacgtccttgagggtggcgttggccggga 465
            |||||||||||  |||||| ||| ||||
Sbjct: 763 aacgtccttgagcttggcgtcggcgggga 735



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>gb|AY059648.1| Zea mays alternative oxidase AOX3 precursor (Aox3) mRNA, nuclear gene
            encoding mitochondrial protein, complete cds~~
          Length = 1397

 Score =  113 bits (57), Expect = 5e-22
 Identities = 81/89 (91%)
 Strand = Plus / Minus

                                                                        
Query: 377  gtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgac 436
            |||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 1101 gtccgacgcgaagtggttgacgtcgcggtggtgcgcctcgtcggcgcgcacgacggtgac 1042

                                         
Query: 437  cacgtccttgagggtggcgttggccggga 465
             |||||||||||  |||||| ||| ||||
Sbjct: 1041 gacgtccttgagcttggcgtcggcgggga 1013



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>gb|M60330.1|SURAOX1A S.guttatum aox1 mRNA encoding an alternative oxidase protein
          Length = 1404

 Score =  101 bits (51), Expect = 2e-18
 Identities = 105/123 (85%)
 Strand = Plus / Minus

                                                                        
Query: 320  tcagtggtatccgatcggcgccggggtggccttcagctccataccctggtagtacacgtc 379
            ||||||||| |||| ||||||||| || | ||||||||| | | ||||||| |  |||||
Sbjct: 1123 tcagtggtacccgagcggcgccggcgtcgtcttcagctcaagatcctggtaatggacgtc 1064

                                                                        
Query: 380  cgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgaccac 439
             || |||||||||||||||||||||||||| |||||||| ||||| || |||||||| ||
Sbjct: 1063 ggaggcgaagtggttgacgtcgcggtggtgtgcctcgtctgcgcggacgacggtgacgac 1004

               
Query: 440  gtc 442
            |||
Sbjct: 1003 gtc 1001



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>dbj|AB078883.1| Triticum aestivum mRNA for alternative oxidase, complete cds
          Length = 1136

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 74/82 (90%)
 Strand = Plus / Minus

                                                                        
Query: 384  gcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgaccacgtcc 443
            |||||||||||||| ||||||||||| ||||||||||||||||| |||||||| ||||||
Sbjct: 1048 gcgaagtggttgacatcgcggtggtgcgcctcgtcggcgcgcacgacggtgacgacgtcc 989

                                  
Query: 444  ttgagggtggcgttggccggga 465
            |||||  |||||| ||| ||||
Sbjct: 988  ttgagcctggcgtcggcgggga 967



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>ref|XM_473758.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1008

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 79/89 (88%)
 Strand = Plus / Minus

                                                                       
Query: 377 gtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgac 436
           |||||||||||| ||||||| |||||||||||| |||||||||||||| |  ||||||||
Sbjct: 951 gtccgatgcgaaatggttgaggtcgcggtggtgcgcctcgtcggcgcggatgacggtgac 892

                                        
Query: 437 cacgtccttgagggtggcgttggccggga 465
            ||||||||||| ||||||| ||| ||||
Sbjct: 891 gacgtccttgagcgtggcgtcggcgggga 863



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>dbj|AK107376.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-B09, full
            insert sequence
          Length = 1360

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 79/89 (88%)
 Strand = Plus / Minus

                                                                        
Query: 377  gtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgac 436
            |||||||||||| ||||||| |||||||||||| |||||||||||||| |  ||||||||
Sbjct: 1098 gtccgatgcgaaatggttgaggtcgcggtggtgcgcctcgtcggcgcggatgacggtgac 1039

                                         
Query: 437  cacgtccttgagggtggcgttggccggga 465
             ||||||||||| ||||||| ||| ||||
Sbjct: 1038 gacgtccttgagcgtggcgtcggcgggga 1010



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>dbj|AB004865.1| Oryza sativa (japonica cultivar-group) AOX1b mRNA for alternative
            oxidase, complete cds
          Length = 1343

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 79/89 (88%)
 Strand = Plus / Minus

                                                                        
Query: 377  gtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgac 436
            |||||||||||| ||||||| |||||||||||| |||||||||||||| |  ||||||||
Sbjct: 1083 gtccgatgcgaaatggttgaggtcgcggtggtgcgcctcgtcggcgcggatgacggtgac 1024

                                         
Query: 437  cacgtccttgagggtggcgttggccggga 465
             ||||||||||| ||||||| ||| ||||
Sbjct: 1023 gacgtccttgagcgtggcgtcggcgggga 995



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>ref|XM_467319.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1038

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 70/78 (89%)
 Strand = Plus / Minus

                                                                       
Query: 378 tccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacc 437
           ||||| |||||||||||||||||||||||||| |||||||||||||| || |||  ||| 
Sbjct: 980 tccgacgcgaagtggttgacgtcgcggtggtgtgcctcgtcggcgcggacgacgacgacg 921

                             
Query: 438 acgtccttgagggtggcg 455
           ||||||||||| ||||||
Sbjct: 920 acgtccttgagcgtggcg 903



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>dbj|AB074005.1| Oryza sativa (japonica cultivar-group) mitochondrial AOX1c mRNA for
            alternative oxidase 1c, complete cds
          Length = 1088

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 70/78 (89%)
 Strand = Plus / Minus

                                                                        
Query: 378  tccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacc 437
            ||||| |||||||||||||||||||||||||| |||||||||||||| || |||  ||| 
Sbjct: 1013 tccgacgcgaagtggttgacgtcgcggtggtgtgcctcgtcggcgcggacgacgacgacg 954

                              
Query: 438  acgtccttgagggtggcg 455
            ||||||||||| ||||||
Sbjct: 953  acgtccttgagcgtggcg 936



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                            
Query: 379      ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 438
                |||| |||||||||||||||||||||||||| |||||||||||||| || |||  ||| |
Sbjct: 28831344 ccgacgcgaagtggttgacgtcgcggtggtgtgcctcgtcggcgcggacgacgacgacga 28831403

                                 
Query: 439      cgtccttgagggtggcg 455
                |||||||||| ||||||
Sbjct: 28831404 cgtccttgagcgtggcg 28831420



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 69/78 (88%)
 Strand = Plus / Minus

                                                                            
Query: 388      agtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgaccacgtccttga 447
                |||||||||||||||||||||| |||||||||||||| || ||  |||| |||||| |||
Sbjct: 12646581 agtggttgacgtcgcggtggtgggcctcgtcggcgcggacgaccatgacgacgtccctga 12646522

                                  
Query: 448      gggtggcgttggccggga 465
                ||||||||| ||| ||||
Sbjct: 12646521 gggtggcgtcggcgggga 12646504



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>dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0459B01
          Length = 163087

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                          
Query: 379    ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 438
              |||| |||||||||||||||||||||||||| |||||||||||||| || |||  ||| |
Sbjct: 147917 ccgacgcgaagtggttgacgtcgcggtggtgtgcctcgtcggcgcggacgacgacgacga 147976

                               
Query: 439    cgtccttgagggtggcg 455
              |||||||||| ||||||
Sbjct: 147977 cgtccttgagcgtggcg 147993



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>dbj|AP003994.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1111_E07
          Length = 123613

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                         
Query: 379   ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 438
             |||| |||||||||||||||||||||||||| |||||||||||||| || |||  ||| |
Sbjct: 24036 ccgacgcgaagtggttgacgtcgcggtggtgtgcctcgtcggcgcggacgacgacgacga 24095

                              
Query: 439   cgtccttgagggtggcg 455
             |||||||||| ||||||
Sbjct: 24096 cgtccttgagcgtggcg 24112



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>dbj|AB074004.1| Oryza sativa (japonica cultivar-group) mitochondrial AOX1c gene for
            alternative oxidase 1c, complete cds
          Length = 2674

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 69/77 (89%)
 Strand = Plus / Minus

                                                                        
Query: 379  ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 438
            |||| |||||||||||||||||||||||||| |||||||||||||| || |||  ||| |
Sbjct: 1753 ccgacgcgaagtggttgacgtcgcggtggtgtgcctcgtcggcgcggacgacgacgacga 1694

                             
Query: 439  cgtccttgagggtggcg 455
            |||||||||| ||||||
Sbjct: 1693 cgtccttgagcgtggcg 1677



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>emb|Z15117.1|SGAOX1G S.guttatum aox1 gene for salicylic acid-inducible alternative oxidase
          Length = 3584

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 55/59 (93%)
 Strand = Plus / Minus

                                                                       
Query: 384  gcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgaccacgtc 442
            |||||||||||||||||||||||||| |||||||||||||| || |||||||| |||||
Sbjct: 2806 gcgaagtggttgacgtcgcggtggtgtgcctcgtcggcgcggacgacggtgacgacgtc 2748



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>dbj|AP004024.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1134_B09
          Length = 105247

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 69/78 (88%)
 Strand = Plus / Minus

                                                                         
Query: 388   agtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgaccacgtccttga 447
             |||||||||||||||||||||| |||||||||||||| || ||  |||| |||||| |||
Sbjct: 43640 agtggttgacgtcgcggtggtgggcctcgtcggcgcggacgaccatgacgacgtccctga 43581

                               
Query: 448   gggtggcgttggccggga 465
             ||||||||| ||| ||||
Sbjct: 43580 gggtggcgtcggcgggga 43563



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>ref|NM_194839.1| Oryza sativa (japonica cultivar-group) putative alternative oxidase
           (OSJNBa0030B02.13), mRNA
          Length = 732

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 92/109 (84%)
 Strand = Plus / Minus

                                                                       
Query: 357 tccataccctggtagtacacgtccgatgcgaagtggttgacgtcgcggtggtgagcctcg 416
           ||||| |||||| | | ||| ||||||||||| |||||||||||||||||||| ||||| 
Sbjct: 695 tccatcccctggaaatgcacatccgatgcgaaatggttgacgtcgcggtggtgcgcctca 636

                                                            
Query: 417 tcggcgcgcaccacggtgaccacgtccttgagggtggcgttggccggga 465
           |||||||  || |||  ||| ||||||||||| ||||||| ||| ||||
Sbjct: 635 tcggcgcagacaacgacgacgacgtccttgagcgtggcgtcggcaggga 587



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>gb|AY644467.1| Saccharum officinarum mitochondrial alternative oxidase 1c mRNA,
           complete cds; nuclear gene for mitochondrial product
          Length = 1189

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 104/125 (83%)
 Strand = Plus / Minus

                                                                       
Query: 324 tggtatccgatcggcgccggggtggccttcagctccataccctggtagtacacgtccgat 383
           |||||||| | |||||| || ||  |||| |||| |||||||||| | |  | |||||| 
Sbjct: 951 tggtatccaagcggcgcaggtgtctccttgagctgcataccctggaaatgaatgtccgac 892

                                                                       
Query: 384 gcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgaccacgtcc 443
           || ||||| ||||||||||||||||| |||||||||| |||||||||| | ||||| |||
Sbjct: 891 gcaaagtgattgacgtcgcggtggtgcgcctcgtcggagcgcaccacgataaccacatcc 832

                
Query: 444 ttgag 448
           |||||
Sbjct: 831 ttgag 827



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>gb|AC135423.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0015C02,
            complete sequence
          Length = 147407

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 68/77 (88%)
 Strand = Plus / Minus

                                                                        
Query: 379  ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 438
            |||||||||| |||||||||||||||||||| ||||||| |||||| || |||  ||| |
Sbjct: 5229 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcgttggcgcggacgacgacgacga 5170

                             
Query: 439  cgtccttgagggtggcg 455
            |||||||||| ||||||
Sbjct: 5169 cgtccttgagcgtggcg 5153



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>gb|AC121364.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0052E20, complete sequence
          Length = 162434

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 68/77 (88%)
 Strand = Plus / Minus

                                                                         
Query: 379   ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 438
             |||||||||| |||||||||||||||||||| ||||||| |||||| || |||  ||| |
Sbjct: 46762 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcgttggcgcggacgacgacgacga 46703

                              
Query: 439   cgtccttgagggtggcg 455
             |||||||||| ||||||
Sbjct: 46702 cgtccttgagcgtggcg 46686



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>dbj|AB097428.1| Oryza sativa (japonica cultivar-group) transposon AnacA1(AOX) DNA,
            complete sequence
          Length = 2105

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 68/77 (88%)
 Strand = Plus / Minus

                                                                        
Query: 379  ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 438
            |||||||||| |||||||||||||||||||| ||||||| |||||| || |||  ||| |
Sbjct: 1129 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcgttggcgcggacgacgacgacga 1070

                             
Query: 439  cgtccttgagggtggcg 455
            |||||||||| ||||||
Sbjct: 1069 cgtccttgagcgtggcg 1053



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 68/77 (88%)
 Strand = Plus / Minus

                                                                            
Query: 379      ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 438
                |||||||||| |||||||||||||||||||| ||||||| |||||| || |||  ||| |
Sbjct: 22942749 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcgttggcgcggacgacgacgacga 22942690

                                 
Query: 439      cgtccttgagggtggcg 455
                |||||||||| ||||||
Sbjct: 22942689 cgtccttgagcgtggcg 22942673



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                               
Query: 398      gtcgcggtggtgagcctcgtcggcgcgcaccacggtgaccacgtcct 444
                ||||| |||||| |||||||||||||| |  |||||||| |||||||
Sbjct: 18430137 gtcgcagtggtgcgcctcgtcggcgcggatgacggtgacgacgtcct 18430183



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>dbj|AB097430.1| Oryza sativa (japonica cultivar-group) transposon AnacA3(AOX) DNA,
            complete sequence
          Length = 3051

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 75/87 (86%)
 Strand = Plus / Minus

                                                                        
Query: 379  ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 438
            |||||||||| |||||||||||||||||||| ||||| |||||||  || |||  ||| |
Sbjct: 2068 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcatcggcgcagacaacgacgacga 2009

                                       
Query: 439  cgtccttgagggtggcgttggccggga 465
            |||||||||| ||||||| ||| ||||
Sbjct: 2008 cgtccttgagcgtggcgtcggcaggga 1982



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>dbj|AB097429.1| Oryza sativa (japonica cultivar-group) transposon AnacA2(AOX) DNA,
            complete sequence
          Length = 2164

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 68/77 (88%), Gaps = 3/77 (3%)
 Strand = Plus / Minus

                                                                        
Query: 379  ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 438
            |||||||||| |||||||||||||||||||| ||||||||||||||    ||| |||| |
Sbjct: 1186 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcgtcggcgcg---gacgatgacaa 1130

                             
Query: 439  cgtccttgagggtggcg 455
            |||||||||| ||||||
Sbjct: 1129 cgtccttgagcgtggcg 1113



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>gb|AC074105.3| Oryza sativa chromosome 10 clone OSJNBa0030B02, complete sequence
          Length = 146836

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 75/87 (86%)
 Strand = Plus / Plus

                                                                          
Query: 379    ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 438
              |||||||||| |||||||||||||||||||| ||||| |||||||  || |||  ||| |
Sbjct: 110474 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcatcggcgcagacaacgacgacga 110533

                                         
Query: 439    cgtccttgagggtggcgttggccggga 465
              |||||||||| ||||||| ||| ||||
Sbjct: 110534 cgtccttgagcgtggcgtcggcaggga 110560



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 75/87 (86%)
 Strand = Plus / Plus

                                                                           
Query: 379     ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 438
               |||||||||| |||||||||||||||||||| ||||| |||||||  || |||  ||| |
Sbjct: 2783698 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcatcggcgcagacaacgacgacga 2783757

                                          
Query: 439     cgtccttgagggtggcgttggccggga 465
               |||||||||| ||||||| ||| ||||
Sbjct: 2783758 cgtccttgagcgtggcgtcggcaggga 2783784



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 68/77 (88%), Gaps = 3/77 (3%)
 Strand = Plus / Plus

                                                                           
Query: 379     ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 438
               |||||||||| |||||||||||||||||||| ||||||||||||||    ||| |||| |
Sbjct: 3654211 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcgtcggcgcg---gacgatgacaa 3654267

                                
Query: 439     cgtccttgagggtggcg 455
               |||||||||| ||||||
Sbjct: 3654268 cgtccttgagcgtggcg 3654284



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>dbj|AP002854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0014B15
          Length = 158821

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 68/77 (88%), Gaps = 3/77 (3%)
 Strand = Plus / Plus

                                                                         
Query: 379   ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 438
             |||||||||| |||||||||||||||||||| ||||||||||||||    ||| |||| |
Sbjct: 48439 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcgtcggcgcg---gacgatgacaa 48495

                              
Query: 439   cgtccttgagggtggcg 455
             |||||||||| ||||||
Sbjct: 48496 cgtccttgagcgtggcg 48512



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 75/87 (86%)
 Strand = Plus / Plus

                                                                           
Query: 379     ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 438
               |||||||||| |||||||||||||||||||| ||||| |||||||  || |||  ||| |
Sbjct: 2783649 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcatcggcgcagacaacgacgacga 2783708

                                          
Query: 439     cgtccttgagggtggcgttggccggga 465
               |||||||||| ||||||| ||| ||||
Sbjct: 2783709 cgtccttgagcgtggcgtcggcaggga 2783735



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>ref|XM_473445.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 378

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 68/78 (87%)
 Strand = Plus / Minus

                                                                       
Query: 378 tccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacc 437
           ||||||||||| |||||||||||||||||||| ||||||||||| || || ||   ||| 
Sbjct: 320 tccgatgcgaaatggttgacgtcgcggtggtgcgcctcgtcggcacgaacaacaacgacg 261

                             
Query: 438 acgtccttgagggtggcg 455
           ||||||||||| ||||||
Sbjct: 260 acgtccttgagcgtggcg 243



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>emb|AL606633.3|OSJN00060 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0010H02,
              complete sequence
          Length = 173522

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                          
Query: 379    ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 438
              |||||||||| |||||||||||||||||||| ||||||||||| || || ||   ||| |
Sbjct: 134813 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcgtcggcacgaacaacaacgacga 134754

                               
Query: 439    cgtccttgagggtggcg 455
              |||||||||| ||||||
Sbjct: 134753 cgtccttgagcgtggcg 134737



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>dbj|AB097431.1| Oryza sativa (japonica cultivar-group) transposon AnacA4(AOX) DNA,
            complete sequence
          Length = 2115

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                        
Query: 379  ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 438
            |||||||||| |||||||||||||||||||| ||||||||||| || || ||   ||| |
Sbjct: 1144 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcgtcggcacgaacaacaacgacga 1085

                             
Query: 439  cgtccttgagggtggcg 455
            |||||||||| ||||||
Sbjct: 1084 cgtccttgagcgtggcg 1068



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>dbj|AB183695.1| Symplocarpus foetidus SfAOX mRNA for skunk cabbage alternative
            oxidase, complete cds
          Length = 1233

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                            
Query: 377  gtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcg 424
            |||||| || ||||||||||||||||||||||| ||||||||||||||
Sbjct: 1095 gtccgaggcaaagtggttgacgtcgcggtggtgggcctcgtcggcgcg 1048



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>gb|AY059646.1| Zea mays alternative oxidase AOX1 precursor (Aox1) mRNA, nuclear gene
            encoding mitochondrial protein, complete cds
          Length = 1519

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 63/72 (87%)
 Strand = Plus / Minus

                                                                        
Query: 377  gtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgac 436
            |||||| || ||||| ||||||||||||||||| |||||||||| ||||||||||   ||
Sbjct: 1110 gtccgacgcaaagtgattgacgtcgcggtggtgcgcctcgtcggagcgcaccacgacaac 1051

                        
Query: 437  cacgtccttgag 448
            ||| ||||||||
Sbjct: 1050 cacatccttgag 1039



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>dbj|AB190213.1| Philodendron bipinnatifidum PsAOX mRNA for alternative oxidase,
            complete cds
          Length = 1283

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 90/108 (83%)
 Strand = Plus / Minus

                                                                        
Query: 317  gcctcagtggtatccgatcggcgccggggtggccttcagctccataccctggtagtacac 376
            |||||||||||| || | |||||| || |  |||||||||||   ||| |||||||  | 
Sbjct: 1107 gcctcagtggtacccaagcggcgctggcgccgccttcagctcatgaccttggtagtggat 1048

                                                            
Query: 377  gtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcg 424
            ||| || |||||||||||||||||||||||||| |||||||| |||||
Sbjct: 1047 gtcggaagcgaagtggttgacgtcgcggtggtgggcctcgtctgcgcg 1000



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>gb|AF040566.1|AF040566 Zea mays alternative oxidase (Aox) gene, partial cds
          Length = 447

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 405 tggtgagcctcgtcggcgcgcaccacggtgaccacgtccttgagggtggcgtt 457
           |||||||| ||||||||||| || |||||||| ||||||||||| ||||||||
Sbjct: 446 tggtgagcttcgtcggcgcggacgacggtgactacgtccttgagcgtggcgtt 394



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>gb|AY422689.1| Nicotiana attenuata tissue-type shoot mitochondrial alternative
            oxidase (AOX2) mRNA, complete cds
          Length = 1278

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 381  gatgcgaagtggttgacgtcgcggtggtgagcctcgtc 418
            ||||| ||||||||||| |||||||| |||||||||||
Sbjct: 1102 gatgcaaagtggttgacatcgcggtgatgagcctcgtc 1065



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>gb|AY422688.1| Nicotiana attenuata tissue-type shoot mitochondrial alternative
            oxidase (AOX1) mRNA, complete cds
          Length = 1420

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 381  gatgcgaagtggttgacgtcgcggtggtgagcctc 415
            ||||| ||||||||||| |||||||| ||||||||
Sbjct: 1090 gatgcaaagtggttgacatcgcggtgatgagcctc 1056



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>gb|AC108501.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1354_D07,
             complete sequence
          Length = 156163

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                            
Query: 398   gtcgcggtggtgagcctcgtcggcgcgcaccacggtgaccacgtcct 444
             ||||| |||||| |||||||||||||| |  |||||||| |||||||
Sbjct: 69974 gtcgcagtggtgcgcctcgtcggcgcggatgacggtgacgacgtcct 70020



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>gb|DQ100441.1| Vigna unguiculata mitochondrial alternative oxidase 1 mRNA,
           complete cds; nuclear gene for mitochondrial product
          Length = 951

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 377 gtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtc 418
           |||||| || ||||||||||| || |||||||| ||||||||
Sbjct: 894 gtccgaagcaaagtggttgacatcacggtggtgtgcctcgtc 853



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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 389     gtggttgacgtcgcggtggtgagcctcgtc 418
               ||||||||||||||||||||| || |||||
Sbjct: 1631710 gtggttgacgtcgcggtggtgcgcttcgtc 1631739



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>gb|S71335.1| Aox1=alternative oxidase {alternative pathway} [Nicotiana
            tabacum=tobacco, cv Bright Yellow, suspension cells,
            mRNA, 1408 nt]
          Length = 1408

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 381  gatgcgaagtggttgacgtcgcggtggtgagcctcgtc 418
            ||||| ||||||||||| || ||||| |||||||||||
Sbjct: 1071 gatgcaaagtggttgacatcacggtgatgagcctcgtc 1034



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>emb|AJ538951.1|NTA538951 Nicotiana tabacum cDNA-AFLP-fragment BT3-M24-001
          Length = 649

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 381 gatgcgaagtggttgacgtcgcggtggtgagcctcgtc 418
           ||||| ||||||||||| || ||||| |||||||||||
Sbjct: 555 gatgcaaagtggttgacatcacggtgatgagcctcgtc 518



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>emb|AJ718098.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT3-24-600, cultivar Bright
           Yellow 2
          Length = 637

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 381 gatgcgaagtggttgacgtcgcggtggtgagcctcgtc 418
           ||||| ||||||||||| || ||||| |||||||||||
Sbjct: 547 gatgcaaagtggttgacatcacggtgatgagcctcgtc 510



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>emb|AJ489270.1|CSA489270 Crocus sativus partial mRNA for alternative oxidase
          Length = 681

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                        
Query: 377 gtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggc 421
           |||||| || ||||| ||||||||||| || |||||||| |||||
Sbjct: 414 gtccgaagcaaagtgattgacgtcgcgatgatgagcctcatcggc 370



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>gb|AC122451.3| Mus musculus BAC clone RP24-252G15 from 16, complete sequence
          Length = 160256

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     aaagaaaaggaacagtaata 23
             ||||||||||||||||||||
Sbjct: 39750 aaagaaaaggaacagtaata 39769



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>ref|XM_644660.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (274.t00013)
           partial mRNA
          Length = 744

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 253 tcaaaacgaaacactcattt 272
           ||||||||||||||||||||
Sbjct: 204 tcaaaacgaaacactcattt 223



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>emb|CR407594.22| Zebrafish DNA sequence from clone DKEY-122C11 in linkage group 4,
             complete sequence
          Length = 160262

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 285   tagcgatgcaaaattcagca 304
             ||||||||||||||||||||
Sbjct: 20972 tagcgatgcaaaattcagca 20953



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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 418     cggcgcgcaccacggtgaccacgtcctt 445
               ||||||||||||||| || |||||||||
Sbjct: 1357570 cggcgcgcaccacggcgagcacgtcctt 1357543



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>gb|AC161457.5| Mus musculus BAC clone RP23-156A3 from chromosome 16, complete sequence
          Length = 208176

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 4      aaagaaaaggaacagtaata 23
              ||||||||||||||||||||
Sbjct: 169883 aaagaaaaggaacagtaata 169902



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>emb|AJ250581.1|STE250581 Streptomyces tendae nikkomycin biosynthetic gene cluster (nikP1,
            nikP2, nikQ, nikR, nikS, nikT, nikU, nikV genes), strain
            Tue901
          Length = 9389

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 418  cggcgcgcaccacggtgacc 437
            ||||||||||||||||||||
Sbjct: 4409 cggcgcgcaccacggtgacc 4390



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>emb|AJ250199.1|STE250199 Streptomyces tendae nikkomycin biosynthetic gene cluster (nikQ, nikR
            genes), strain Tue901
          Length = 2218

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 418  cggcgcgcaccacggtgacc 437
            ||||||||||||||||||||
Sbjct: 1508 cggcgcgcaccacggtgacc 1489



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>gb|DQ100440.1| Vigna unguiculata mitochondrial alternative oxidase 1 gene, complete
            cds; nuclear gene for mitochondrial product
          Length = 1543

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 387  aagtggttgacgtcgcggtggtgagcctcgtc 418
            ||||||||||| || |||||||| ||||||||
Sbjct: 1387 aagtggttgacatcacggtggtgtgcctcgtc 1356



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>gb|AC093151.2| Homo sapiens chromosome 1 clone RP11-399E6, complete sequence
          Length = 188276

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 146    cgtaactgacaagcacactg 165
              ||||||||||||||||||||
Sbjct: 119899 cgtaactgacaagcacactg 119918



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>gb|AC013799.6| Homo sapiens, clone RP11-20J1, complete sequence
          Length = 186076

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 39    tgtacatagtgaggtagatcaatg 62
             ||||||||||||||||||| ||||
Sbjct: 59591 tgtacatagtgaggtagatgaatg 59568



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>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome
          Length = 2628784

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 335     cggcgccggggtggccttca 354
               ||||||||||||||||||||
Sbjct: 1721041 cggcgccggggtggccttca 1721022



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>emb|X79768.1|NTSR1AOX N.tabacum (SR1) aox mRNA
          Length = 1134

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 387 aagtggttgacgtcgcggtggtgagcctcgtc 418
           ||||||||||| || ||||| |||||||||||
Sbjct: 862 aagtggttgacatcacggtgatgagcctcgtc 831



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>dbj|AB055060.1| Catharanthus roseus gene for alternative oxidase, complete cds
          Length = 11471

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 388  agtggttgacgtcgcggtggtgagcctc 415
            ||||||| || |||||||||||||||||
Sbjct: 5510 agtggttaacatcgcggtggtgagcctc 5483


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,671,841
Number of Sequences: 3902068
Number of extensions: 3671841
Number of successful extensions: 174720
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 174310
Number of HSP's gapped (non-prelim): 395
length of query: 465
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 443
effective length of database: 17,147,199,772
effective search space: 7596209498996
effective search space used: 7596209498996
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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