ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart26e03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_186256.1| Oryza sativa (japonica cultivar-group), mRNA 56 1e-04
2ref|XM_476609.1| Oryza sativa (japonica cultivar-group), mRNA 56 1e-04
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
4dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
5dbj|AK108823.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
6ref|NM_186254.2| Oryza sativa (japonica cultivar-group), mRNA 48 0.026
7dbj|AK108897.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.026
8gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.6
9emb|BX914197.15| Zebrafish DNA sequence from clone DKEYP-81F11 i... 42 1.6
10gb|AC091849.2| Homo sapiens chromosome 5 clone CTD-2245E15, comp... 42 1.6
11gb|AC105352.2| Drosophila melanogaster X BAC RP98-45O17 (Roswell... 42 1.6
12gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 geno... 42 1.6
13dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
14gb|BC089772.1| Rattus norvegicus mitogen activated protein kinas... 42 1.6
15emb|Z16415.1|RNMAPKK R.norvegicus mRNA for MAP kinase kinase 42 1.6
16gb|AE003430.4| Drosophila melanogaster chromosome X, section 14 ... 42 1.6
17ref|NM_031643.3| Rattus norvegicus mitogen activated protein kin... 42 1.6
18dbj|D13341.1|RATMAPKKA Rattus norvegicus mRNA for MAP kinase kin... 42 1.6
19ref|NM_185007.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.3
20gb|AC133098.7| Mus musculus BAC clone RP23-336L12 from chromosom... 40 6.3
21gb|AC125076.4| Mus musculus BAC clone RP23-472F9 from chromosome... 40 6.3
22gb|AC115298.6| Mus musculus BAC clone RP23-224G24 from X, comple... 40 6.3
23gb|AC093141.2| Felis catus clone RP86-512F4, complete sequence 40 6.3
24emb|AL358785.10| Human DNA sequence from clone RP11-245E14 on ch... 40 6.3
25emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete ... 40 6.3
26gb|AC087894.15| Homo sapiens 12 BAC RP11-749H20 (Roswell Park Ca... 40 6.3
27ref|XM_688200.1| PREDICTED: Danio rerio similar to parathyroid h... 40 6.3
28gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 6.3
29dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
30gb|AC108491.4| Homo sapiens BAC clone RP11-138I17 from 4, comple... 40 6.3
31gb|AC113618.5| Homo sapiens BAC clone RP11-1367O10 from 2, compl... 40 6.3
32gb|AC074224.3|AC074224 Mus musculus strain C57BL6/J chromosome 2... 40 6.3
33gb|AC117376.3| Homo sapiens 12 BAC RP11-349K16 (Roswell Park Can... 40 6.3
34gb|AC005678.1|AC005678 Homo sapiens PAC clone RP11-569I24 from 7... 40 6.3
35dbj|AP002870.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
36dbj|AK070713.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
37emb|BX664720.7| Zebrafish DNA sequence from clone DKEYP-4H4 in l... 40 6.3
38emb|AL928590.10| Mouse DNA sequence from clone RP23-26A12 on chr... 40 6.3
39emb|AL845453.6| Mouse DNA sequence from clone RP23-296G5 on chro... 40 6.3 
>ref|NM_186256.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 507

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                       
Query: 393 acggacggcatcggcggcagtggcaccttgggcaggtcggggatggacggcataggcggc 452
           ||||| |||||||||||||| | ||||||||||| | | || || |||||||| ||||||
Sbjct: 470 acggatggcatcggcggcagcgtcaccttgggcacggccggcatcgacggcatcggcggc 411

               
Query: 453 agcg 456
           ||||
Sbjct: 410 agcg 407



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 62/76 (81%)
 Strand = Plus / Minus

                                                                       
Query: 351 acggacggcatcggaggcaatggcaccttgggcaggtcggggacggacggcatcggcggc 410
           ||||| |||||||| ||||  | ||||||||||| | | || |  |||||||||||||||
Sbjct: 470 acggatggcatcggcggcagcgtcaccttgggcacggccggcatcgacggcatcggcggc 411

                           
Query: 411 agtggcaccttgggca 426
           || | |||||| ||||
Sbjct: 410 agcgtcaccttcggca 395



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 399 ggcatcggcggcagtggcaccttgggca 426
           |||||||||||||| | |||||||||||
Sbjct: 278 ggcatcggcggcagcgccaccttgggca 251
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>ref|XM_476609.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 858

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                       
Query: 393 acggacggcatcggcggcagtggcaccttgggcaggtcggggatggacggcataggcggc 452
           ||||| |||||||||||||| | ||||||||||| | | || || |||||||| ||||||
Sbjct: 597 acggatggcatcggcggcagcgtcaccttgggcacggccggcatcgacggcatcggcggc 538

               
Query: 453 agcg 456
           ||||
Sbjct: 537 agcg 534



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 62/76 (81%)
 Strand = Plus / Minus

                                                                       
Query: 351 acggacggcatcggaggcaatggcaccttgggcaggtcggggacggacggcatcggcggc 410
           ||||| |||||||| ||||  | ||||||||||| | | || |  |||||||||||||||
Sbjct: 597 acggatggcatcggcggcagcgtcaccttgggcacggccggcatcgacggcatcggcggc 538

                           
Query: 411 agtggcaccttgggca 426
           || | |||||| ||||
Sbjct: 537 agcgtcaccttcggca 522
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                           
Query: 393     acggacggcatcggcggcagtggcaccttgggcaggtcggggatggacggcataggcggc 452
               ||||| |||||||||||||| | ||||||||||| | | || || |||||||| ||||||
Sbjct: 2214519 acggatggcatcggcggcagcgtcaccttgggcacggccggcatcgacggcatcggcggc 2214460

                   
Query: 453     agcg 456
               ||||
Sbjct: 2214459 agcg 2214456



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                           
Query: 393     acggacggcatcggcggcagtggcaccttgggcaggtcggggatggacggcataggcggc 452
               ||||| |||||||||||||| | ||||||||||| | | || || |||||||| ||||||
Sbjct: 2212384 acggatggcatcggcggcagcgtcaccttgggcacggccggcatcgacggcatcggcggc 2212325

                   
Query: 453     agcg 456
               ||||
Sbjct: 2212324 agcg 2212321



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                           
Query: 393     acggacggcatcggcggcagtggcaccttgggcaggtcggggatggacggcataggcggc 452
               ||||| |||||||||||||| | |||||||||||   | || || |||||||| ||||||
Sbjct: 2209517 acggatggcatcggcggcagcgtcaccttgggcaccgccggaatcgacggcatcggcggc 2209458

                   
Query: 453     agcg 456
               ||||
Sbjct: 2209457 agcg 2209454



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                           
Query: 399     ggcatcggcggcagtggcaccttgggca 426
               |||||||||||||||| |||||||||||
Sbjct: 2209301 ggcatcggcggcagtgccaccttgggca 2209274



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 319     tcggcggcagtggcaccttgggcacg 344
               |||||||||||| |||||||||||||
Sbjct: 2209297 tcggcggcagtgccaccttgggcacg 2209272



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 62/76 (81%)
 Strand = Plus / Minus

                                                                           
Query: 351     acggacggcatcggaggcaatggcaccttgggcaggtcggggacggacggcatcggcggc 410
               ||||| |||||||| ||||  | ||||||||||| | | || |  |||||||||||||||
Sbjct: 2214519 acggatggcatcggcggcagcgtcaccttgggcacggccggcatcgacggcatcggcggc 2214460

                               
Query: 411     agtggcaccttgggca 426
               || | |||||| ||||
Sbjct: 2214459 agcgtcaccttcggca 2214444



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 399     ggcatcggcggcagtggcaccttgggca 426
               |||||||||||||| | |||||||||||
Sbjct: 2214327 ggcatcggcggcagcgccaccttgggca 2214300



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 62/76 (81%)
 Strand = Plus / Minus

                                                                           
Query: 351     acggacggcatcggaggcaatggcaccttgggcaggtcggggacggacggcatcggcggc 410
               ||||| |||||||| ||||  | ||||||||||| | | || |  |||||||||||||||
Sbjct: 2212384 acggatggcatcggcggcagcgtcaccttgggcacggccggcatcgacggcatcggcggc 2212325

                               
Query: 411     agtggcaccttgggca 426
               || | |||||| ||||
Sbjct: 2212324 agcgtcaccttcggca 2212309
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>dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1351_C05
          Length = 112465

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                         
Query: 393   acggacggcatcggcggcagtggcaccttgggcaggtcggggatggacggcataggcggc 452
             ||||| |||||||||||||| | ||||||||||| | | || || |||||||| ||||||
Sbjct: 82421 acggatggcatcggcggcagcgtcaccttgggcacggccggcatcgacggcatcggcggc 82362

                 
Query: 453   agcg 456
             ||||
Sbjct: 82361 agcg 82358



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                         
Query: 393   acggacggcatcggcggcagtggcaccttgggcaggtcggggatggacggcataggcggc 452
             ||||| |||||||||||||| | ||||||||||| | | || || |||||||| ||||||
Sbjct: 80286 acggatggcatcggcggcagcgtcaccttgggcacggccggcatcgacggcatcggcggc 80227

                 
Query: 453   agcg 456
             ||||
Sbjct: 80226 agcg 80223



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                         
Query: 393   acggacggcatcggcggcagtggcaccttgggcaggtcggggatggacggcataggcggc 452
             ||||| |||||||||||||| | |||||||||||   | || || |||||||| ||||||
Sbjct: 77419 acggatggcatcggcggcagcgtcaccttgggcaccgccggaatcgacggcatcggcggc 77360

                 
Query: 453   agcg 456
             ||||
Sbjct: 77359 agcg 77356



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 399   ggcatcggcggcagtggcaccttgggca 426
             |||||||||||||||| |||||||||||
Sbjct: 77203 ggcatcggcggcagtgccaccttgggca 77176



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 319   tcggcggcagtggcaccttgggcacg 344
             |||||||||||| |||||||||||||
Sbjct: 77199 tcggcggcagtgccaccttgggcacg 77174



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 62/76 (81%)
 Strand = Plus / Minus

                                                                         
Query: 351   acggacggcatcggaggcaatggcaccttgggcaggtcggggacggacggcatcggcggc 410
             ||||| |||||||| ||||  | ||||||||||| | | || |  |||||||||||||||
Sbjct: 82421 acggatggcatcggcggcagcgtcaccttgggcacggccggcatcgacggcatcggcggc 82362

                             
Query: 411   agtggcaccttgggca 426
             || | |||||| ||||
Sbjct: 82361 agcgtcaccttcggca 82346



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 399   ggcatcggcggcagtggcaccttgggca 426
             |||||||||||||| | |||||||||||
Sbjct: 82229 ggcatcggcggcagcgccaccttgggca 82202



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 62/76 (81%)
 Strand = Plus / Minus

                                                                         
Query: 351   acggacggcatcggaggcaatggcaccttgggcaggtcggggacggacggcatcggcggc 410
             ||||| |||||||| ||||  | ||||||||||| | | || |  |||||||||||||||
Sbjct: 80286 acggatggcatcggcggcagcgtcaccttgggcacggccggcatcgacggcatcggcggc 80227

                             
Query: 411   agtggcaccttgggca 426
             || | |||||| ||||
Sbjct: 80226 agcgtcaccttcggca 80211
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>dbj|AK108823.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-F04, full
           insert sequence
          Length = 858

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                       
Query: 393 acggacggcatcggcggcagtggcaccttgggcaggtcggggatggacggcataggcggc 452
           ||||| |||||||||||||| | ||||||||||| | | || || |||||||| ||||||
Sbjct: 597 acggatggcatcggcggcagcgtcaccttgggcacggccggcatcgacggcatcggcggc 538

               
Query: 453 agcg 456
           ||||
Sbjct: 537 agcg 534



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 62/76 (81%)
 Strand = Plus / Minus

                                                                       
Query: 351 acggacggcatcggaggcaatggcaccttgggcaggtcggggacggacggcatcggcggc 410
           ||||| |||||||| ||||  | ||||||||||| | | || |  |||||||||||||||
Sbjct: 597 acggatggcatcggcggcagcgtcaccttgggcacggccggcatcgacggcatcggcggc 538

                           
Query: 411 agtggcaccttgggca 426
           || | |||||| ||||
Sbjct: 537 agcgtcaccttcggca 522
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>ref|NM_186254.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 817

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                       
Query: 393 acggacggcatcggcggcagtggcaccttgggcaggtcggggatggacggcataggcggc 452
           ||||| |||||||||||||| | |||||||||||   | || || |||||||| ||||||
Sbjct: 542 acggatggcatcggcggcagcgtcaccttgggcaccgccggaatcgacggcatcggcggc 483

               
Query: 453 agcg 456
           ||||
Sbjct: 482 agcg 479



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 399 ggcatcggcggcagtggcaccttgggca 426
           |||||||||||||||| |||||||||||
Sbjct: 326 ggcatcggcggcagtgccaccttgggca 299



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 319 tcggcggcagtggcaccttgggcacg 344
           |||||||||||| |||||||||||||
Sbjct: 322 tcggcggcagtgccaccttgggcacg 297
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>dbj|AK108897.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-F01, full
           insert sequence
          Length = 817

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                       
Query: 393 acggacggcatcggcggcagtggcaccttgggcaggtcggggatggacggcataggcggc 452
           ||||| |||||||||||||| | |||||||||||   | || || |||||||| ||||||
Sbjct: 542 acggatggcatcggcggcagcgtcaccttgggcaccgccggaatcgacggcatcggcggc 483

               
Query: 453 agcg 456
           ||||
Sbjct: 482 agcg 479



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 399 ggcatcggcggcagtggcaccttgggca 426
           |||||||||||||||| |||||||||||
Sbjct: 326 ggcatcggcggcagtgccaccttgggca 299



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 319 tcggcggcagtggcaccttgggcacg 344
           |||||||||||| |||||||||||||
Sbjct: 322 tcggcggcagtgccaccttgggcacg 297
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 432      gggatggacggcataggcggcagcg 456
                |||||||||||||| ||||||||||
Sbjct: 32124593 gggatggacggcatcggcggcagcg 32124569



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 392      gacggacggcatcggcggcagtgg 415
                ||||||||||||||||||| ||||
Sbjct: 32122216 gacggacggcatcggcggctgtgg 32122193
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>emb|BX914197.15| Zebrafish DNA sequence from clone DKEYP-81F11 in linkage group 11,
            complete sequence
          Length = 198600

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 198  gcagtttcatcacactcgtga 218
            |||||||||||||||||||||
Sbjct: 3565 gcagtttcatcacactcgtga 3585
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>gb|AC091849.2| Homo sapiens chromosome 5 clone CTD-2245E15, complete sequence
          Length = 131371

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 129   cacaggtgctgctcaaacgaa 149
             |||||||||||||||||||||
Sbjct: 59909 cacaggtgctgctcaaacgaa 59889
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>gb|AC105352.2| Drosophila melanogaster X BAC RP98-45O17 (Roswell Park Cancer
            Institute Drosophila BAC Library) complete sequence
          Length = 172784

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 147  gaatactatcaagttaaagta 167
            |||||||||||||||||||||
Sbjct: 2192 gaatactatcaagttaaagta 2212
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>gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 genomic sequence, complete
              sequence
          Length = 178158

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 432    gggatggacggcataggcggcagcg 456
              |||||||||||||| ||||||||||
Sbjct: 125718 gggatggacggcatcggcggcagcg 125694



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 392    gacggacggcatcggcggcagtgg 415
              ||||||||||||||||||| ||||
Sbjct: 123341 gacggacggcatcggcggctgtgg 123318
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 432      gggatggacggcataggcggcagcg 456
                |||||||||||||| ||||||||||
Sbjct: 32215105 gggatggacggcatcggcggcagcg 32215081



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 392      gacggacggcatcggcggcagtgg 415
                ||||||||||||||||||| ||||
Sbjct: 32212728 gacggacggcatcggcggctgtgg 32212705
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>gb|BC089772.1| Rattus norvegicus mitogen activated protein kinase kinase 1, mRNA
            (cDNA clone MGC:108573 IMAGE:7382030), complete cds
          Length = 2145

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 148  aatactatcaagttaaagtaa 168
            |||||||||||||||||||||
Sbjct: 2102 aatactatcaagttaaagtaa 2122
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>emb|Z16415.1|RNMAPKK R.norvegicus mRNA for MAP kinase kinase
          Length = 2136

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 148  aatactatcaagttaaagtaa 168
            |||||||||||||||||||||
Sbjct: 2090 aatactatcaagttaaagtaa 2110
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>gb|AE003430.4| Drosophila melanogaster chromosome X, section 14 of 74 of the complete
              sequence
          Length = 296227

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 147    gaatactatcaagttaaagta 167
              |||||||||||||||||||||
Sbjct: 135884 gaatactatcaagttaaagta 135864
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>ref|NM_031643.3| Rattus norvegicus mitogen activated protein kinase kinase 1 (Map2k1),
            mRNA
          Length = 2136

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 148  aatactatcaagttaaagtaa 168
            |||||||||||||||||||||
Sbjct: 2090 aatactatcaagttaaagtaa 2110
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>dbj|D13341.1|RATMAPKKA Rattus norvegicus mRNA for MAP kinase kinase, complete cds
          Length = 2136

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 148  aatactatcaagttaaagtaa 168
            |||||||||||||||||||||
Sbjct: 2090 aatactatcaagttaaagtaa 2110
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>ref|NM_185007.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 849

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 392 gacggacggcatcggcggcagtgg 415
           ||||||||||||||||||| ||||
Sbjct: 432 gacggacggcatcggcggctgtgg 409
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>gb|AC133098.7| Mus musculus BAC clone RP23-336L12 from chromosome 6, complete sequence
          Length = 182955

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 48    tacacacatccacaccacac 67
             ||||||||||||||||||||
Sbjct: 81781 tacacacatccacaccacac 81762
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>gb|AC125076.4| Mus musculus BAC clone RP23-472F9 from chromosome 2, complete sequence
          Length = 165496

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    acaccacacgcaccaatcga 78
             ||||||||||||||||||||
Sbjct: 75393 acaccacacgcaccaatcga 75412
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>gb|AC115298.6| Mus musculus BAC clone RP23-224G24 from X, complete sequence
          Length = 184032

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    aaatgtacaagcataaagta 49
             ||||||||||||||||||||
Sbjct: 47971 aaatgtacaagcataaagta 47952
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>gb|AC093141.2| Felis catus clone RP86-512F4, complete sequence
          Length = 119353

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 420   ttgggcaggtcggggatgga 439
             ||||||||||||||||||||
Sbjct: 53165 ttgggcaggtcggggatgga 53184
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>emb|AL358785.10| Human DNA sequence from clone RP11-245E14 on chromosome 6 Contains
            the 3' end of the gene for a novel protein similar to
            zinc finger protein 306 (ZNF306, ZFP47), the 3' end of
            gene KIAA0426, ESTs, STSs and GSSs, complete sequence
          Length = 17464

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 162  aaagtaaccatatggtttat 181
            ||||||||||||||||||||
Sbjct: 5195 aaagtaaccatatggtttat 5176
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>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29
          Length = 290850

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 288    ggcacggccggcacaccggg 307
              ||||||||||||||||||||
Sbjct: 208545 ggcacggccggcacaccggg 208564
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>gb|AC087894.15| Homo sapiens 12 BAC RP11-749H20 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 169117

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 48     tacacacatccacaccacacgcac 71
              ||||||||| ||||||||||||||
Sbjct: 136930 tacacacatgcacaccacacgcac 136907
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>ref|XM_688200.1| PREDICTED: Danio rerio similar to parathyroid hormone type-2 receptor
            precursor (LOC564876), mRNA
          Length = 2118

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 82   gatacgacacacgtaaacaa 101
            ||||||||||||||||||||
Sbjct: 1343 gatacgacacacgtaaacaa 1362
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 348     ggaacggacggcatcggaggcaat 371
               |||||||||||||||| |||||||
Sbjct: 2537295 ggaacggacggcatcgaaggcaat 2537318
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 157      aagttaaagtaaccatatgg 176
                ||||||||||||||||||||
Sbjct: 14231804 aagttaaagtaaccatatgg 14231823
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>gb|AC108491.4| Homo sapiens BAC clone RP11-138I17 from 4, complete sequence
          Length = 133452

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 363   ggaggcaatggcaccttggg 382
             ||||||||||||||||||||
Sbjct: 85256 ggaggcaatggcaccttggg 85237
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>gb|AC113618.5| Homo sapiens BAC clone RP11-1367O10 from 2, complete sequence
          Length = 199917

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 48     tacacacatccacaccacacgcac 71
              ||||||||| ||||||||||||||
Sbjct: 141143 tacacacatacacaccacacgcac 141166
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>gb|AC074224.3|AC074224 Mus musculus strain C57BL6/J chromosome 2 clone RP23-43C3, complete
             sequence
          Length = 188989

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 410   cagtggcaccttgggcaggt 429
             ||||||||||||||||||||
Sbjct: 99093 cagtggcaccttgggcaggt 99074
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>gb|AC117376.3| Homo sapiens 12 BAC RP11-349K16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 177041

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 48     tacacacatccacaccacacgcac 71
              ||||||||| ||||||||||||||
Sbjct: 117575 tacacacatgcacaccacacgcac 117598
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>gb|AC005678.1|AC005678 Homo sapiens PAC clone RP11-569I24 from 7, complete sequence
          Length = 187543

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   aaagtaaccatatggtttat 181
             ||||||||||||||||||||
Sbjct: 32866 aaagtaaccatatggtttat 32847
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>dbj|AP002870.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0458A05
          Length = 120593

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 157   aagttaaagtaaccatatgg 176
             ||||||||||||||||||||
Sbjct: 27494 aagttaaagtaaccatatgg 27513
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>dbj|AK070713.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063G16, full
           insert sequence
          Length = 1148

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 392 gacggacggcatcggcggcagtgg 415
           ||||||||||||||||||| ||||
Sbjct: 493 gacggacggcatcggcggctgtgg 470
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>emb|BX664720.7| Zebrafish DNA sequence from clone DKEYP-4H4 in linkage group 22,
            complete sequence
          Length = 121320

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 82   gatacgacacacgtaaacaa 101
            ||||||||||||||||||||
Sbjct: 4024 gatacgacacacgtaaacaa 4005
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>emb|AL928590.10| Mouse DNA sequence from clone RP23-26A12 on chromosome 2, complete
              sequence
          Length = 171007

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 410    cagtggcaccttgggcaggt 429
              ||||||||||||||||||||
Sbjct: 149577 cagtggcaccttgggcaggt 149596
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>emb|AL845453.6| Mouse DNA sequence from clone RP23-296G5 on chromosome 2, complete
             sequence
          Length = 159565

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    acaccacacgcaccaatcga 78
             ||||||||||||||||||||
Sbjct: 15940 acaccacacgcaccaatcga 15921


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,012,118
Number of Sequences: 3902068
Number of extensions: 3012118
Number of successful extensions: 68006
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67666
Number of HSP's gapped (non-prelim): 333
length of query: 465
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 443
effective length of database: 17,147,199,772
effective search space: 7596209498996
effective search space used: 7596209498996
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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