Clone Name | rbart26d12 |
---|---|
Clone Library Name | barley_pub |
>CTRO_MOUSE (P49025) Citron Rho-interacting kinase (EC 2.7.11.1) (CRIK)| (Rho-interacting, serine/threonine-protein kinase 21) Length = 2055 Score = 32.0 bits (71), Expect = 0.93 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Frame = -3 Query: 489 AEEEEEDAH-RQDKDEGLKMKLFRRFHRHHAHDSENEVDEVEELARK 352 AE E E H R+D EG+K KL R H+ EN+V +E + R+ Sbjct: 668 AERELEKLHNREDSSEGIKKKLVEAEERRHS--LENKVKRLETMERR 712
>LEGB_PEA (P14594) Legumin B [Contains: Legumin B alpha chain (Legumin B| acidic chain); Legumin B beta chain (Legumin B basic chain)] (Fragment) Length = 338 Score = 30.8 bits (68), Expect = 2.1 Identities = 17/45 (37%), Positives = 26/45 (57%) Frame = -3 Query: 486 EEEEEDAHRQDKDEGLKMKLFRRFHRHHAHDSENEVDEVEELARK 352 +EEEE +H Q K+E + + R HR H+ + + DE EE R+ Sbjct: 52 QEEEEQSHSQRKEEEEEEQEQR--HRKHSKKEDEDEDEEEEEERE 94
>AT11C_HUMAN (Q8NB49) Probable phospholipid-transporting ATPase IG (EC 3.6.3.1)| (ATPase class I type 11C) (ATPase IG) (ATPase IQ) (ATPase class VI type 11C) Length = 1132 Score = 30.4 bits (67), Expect = 2.7 Identities = 10/29 (34%), Positives = 20/29 (68%) Frame = -2 Query: 124 YFFFLRIPRYITTWVYVLLCLFVSLFARV 38 YF F ++ ++TW+ ++L +F+SLF + Sbjct: 1057 YFVFAQMLSSVSTWLAIILLIFISLFPEI 1085
>VGLM_BUNSH (P04875) M polyprotein precursor [Contains: Glycoprotein G2;| Nonstructural protein NS-M; Glycoprotein G1] Length = 1441 Score = 30.0 bits (66), Expect = 3.5 Identities = 12/50 (24%), Positives = 28/50 (56%), Gaps = 8/50 (16%) Frame = -2 Query: 130 ISYFFFLRIPRYITTWVYVLLCLFVSL--------FARVGRLYEQQCDVF 5 I++++F+ I Y TW +++ L + L F+ + +Y ++CD++ Sbjct: 354 INFYYFVCIMNYAVTWGLIIIGLLIGLLFKKYQHRFSNLYAMYCEECDMY 403
>AT11C_MOUSE (Q9QZW0) Probable phospholipid-transporting ATPase 11C (EC 3.6.3.1)| (Fragment) Length = 347 Score = 29.6 bits (65), Expect = 4.6 Identities = 10/29 (34%), Positives = 20/29 (68%) Frame = -2 Query: 124 YFFFLRIPRYITTWVYVLLCLFVSLFARV 38 YF F ++ ++TW+ ++L +F+SLF + Sbjct: 285 YFVFAQMLCSVSTWLAIILLIFISLFPEI 313
>SRCH_RABIT (P16230) Sarcoplasmic reticulum histidine-rich calcium-binding| protein precursor Length = 852 Score = 29.3 bits (64), Expect = 6.0 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Frame = -3 Query: 480 EEEDAHRQDKDEGLKMKLFR-RFHRHHAHDSENEVDEVEE 364 EEE+ D DEG + R + HRH H E + D+ +E Sbjct: 260 EEEEDEEDDDDEGDSTESDRHQAHRHRGHREEEDEDDDDE 299
>MYO5C_HUMAN (Q9NQX4) Myosin-5C (Myosin Vc)| Length = 1742 Score = 28.9 bits (63), Expect = 7.8 Identities = 11/42 (26%), Positives = 21/42 (50%) Frame = -3 Query: 486 EEEEEDAHRQDKDEGLKMKLFRRFHRHHAHDSENEVDEVEEL 361 EE HR ++EG + K + H + E +D+++E+ Sbjct: 1244 EELSNQLHRSQEEEGTQRKALEAQNEIHTKEKEKLIDKIQEM 1285
>SRCH_HUMAN (P23327) Sarcoplasmic reticulum histidine-rich calcium-binding| protein precursor Length = 699 Score = 28.9 bits (63), Expect = 7.8 Identities = 11/37 (29%), Positives = 20/37 (54%) Frame = -3 Query: 486 EEEEEDAHRQDKDEGLKMKLFRRFHRHHAHDSENEVD 376 +E EE+ ++++E + + HRH H SE + D Sbjct: 190 DEGEEEEEEEEEEEEASTEYGHQAHRHRGHGSEEDED 226
>HMW2_MYCGE (P47460) Cytadherence high molecular weight protein 2 (Cytadherence| accessory protein 2) Length = 1805 Score = 28.9 bits (63), Expect = 7.8 Identities = 12/49 (24%), Positives = 28/49 (57%) Frame = -3 Query: 480 EEEDAHRQDKDEGLKMKLFRRFHRHHAHDSENEVDEVEELARKLGEAIV 334 +E+D R+D++ + K F + + + E++E+E++ R L ++ V Sbjct: 1038 KEQDQQRKDQEINWRFKQFEKEYTDFDEAKKRELEELEKIRRSLSQSNV 1086 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,903,017 Number of Sequences: 219361 Number of extensions: 939117 Number of successful extensions: 3184 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 2889 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3148 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3478785780 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)