ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart26d10 |
|---|---|
| Clone Library Name | barley_pub |
>NOX1_HUMAN (Q9Y5S8) NADPH oxidase homolog 1 (NOX-1) (NOH-1) (NADH/NADPH| mitogenic oxidase subunit P65-MOX) (Mitogenic oxidase 1) (MOX1) Length = 564 Score = 52.8 bits (125), Expect = 3e-07 Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 2/68 (2%) Frame = -3 Query: 416 SGTRVRTHFARPCWRDVYKRVACDHQGQRVGVFYCGDQKLTPELRRLSHDFSHRTTTK-- 243 +G + +T F RP W + + +A H VGVF CG + L LR+ H +S K Sbjct: 497 TGLKQKTSFGRPMWDNEFSTIATSHPKSVVGVFLCGPRTLAKSLRKCCHRYSSLDPRKVQ 556 Query: 242 FVFHKENF 219 F F+KENF Sbjct: 557 FYFNKENF 564
>NOX3_HUMAN (Q9HBY0) NADPH oxidase 3 (EC 1.6.3.-) (gp91phox homolog 3) (GP91-3)| (Mitogenic oxidase 2) Length = 568 Score = 50.8 bits (120), Expect = 1e-06 Identities = 21/68 (30%), Positives = 41/68 (60%), Gaps = 2/68 (2%) Frame = -3 Query: 416 SGTRVRTHFARPCWRDVYKRVACDHQGQRVGVFYCGDQKLTPELRRLSHDFSHRTT--TK 243 +G + +T + RP W + +K++A +H +GVF+CG + L+ L+++ H +S Sbjct: 501 TGLKQKTFYGRPNWNNEFKQIAYNHPSSSIGVFFCGPKALSRTLQKMCHLYSSADPRGVH 560 Query: 242 FVFHKENF 219 F ++KE+F Sbjct: 561 FYYNKESF 568
>CY24B_PIG (P52649) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)| (Neutrophil cytochrome b 91 kDa polypeptide) (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane glycoprotein gp91phox) (Cytochrome b(558) beta chain) (Cytochrome b558 beta Length = 484 Score = 50.4 bits (119), Expect = 2e-06 Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 2/68 (2%) Frame = -3 Query: 416 SGTRVRTHFARPCWRDVYKRVACDHQGQRVGVFYCGDQKLTPELRR--LSHDFSHRTTTK 243 +G + +T + RP W + +K +A H R+GVF CG + L L + +S+ S Sbjct: 417 TGLKQKTLYGRPNWDNEFKTIASQHPTTRIGVFLCGPEALAETLNKQCISNSDSSPRGVH 476 Query: 242 FVFHKENF 219 F+F+KENF Sbjct: 477 FIFNKENF 484
>CY24B_HUMAN (P04839) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)| (Neutrophil cytochrome b 91 kDa polypeptide) (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane glycoprotein gp91phox) (Cytochrome b(558) beta chain) (Cytochrome b558 be Length = 569 Score = 50.4 bits (119), Expect = 2e-06 Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 2/68 (2%) Frame = -3 Query: 416 SGTRVRTHFARPCWRDVYKRVACDHQGQRVGVFYCGDQKLTPELRR--LSHDFSHRTTTK 243 +G + +T + RP W + +K +A H R+GVF CG + L L + +S+ S Sbjct: 502 TGLKQKTLYGRPNWDNEFKTIASQHPNTRIGVFLCGPEALAETLSKQSISNSESGPRGVH 561 Query: 242 FVFHKENF 219 F+F+KENF Sbjct: 562 FIFNKENF 569
>NOX3_RAT (Q672K1) NADPH oxidase 3 (EC 1.6.3.-)| Length = 568 Score = 49.7 bits (117), Expect = 3e-06 Identities = 20/68 (29%), Positives = 40/68 (58%), Gaps = 2/68 (2%) Frame = -3 Query: 416 SGTRVRTHFARPCWRDVYKRVACDHQGQRVGVFYCGDQKLTPELRRLSHDFSHRTT--TK 243 +G + +T + RP W + +K++A +H +GVF+CG + ++ L+++ +S Sbjct: 501 TGLKQKTFYGRPNWNEEFKQIAYNHPSSSIGVFFCGPKAMSKTLQKMCRLYSSSDPRGVH 560 Query: 242 FVFHKENF 219 F ++KENF Sbjct: 561 FYYNKENF 568
>CY24B_BOVIN (O46522) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)| (Neutrophil cytochrome b 91 kDa polypeptide) (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane glycoprotein gp91phox) (Cytochrome b(558) beta chain) (Cytochrome b558 be Length = 570 Score = 49.3 bits (116), Expect = 4e-06 Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 2/68 (2%) Frame = -3 Query: 416 SGTRVRTHFARPCWRDVYKRVACDHQGQRVGVFYCGDQKLTPELRR--LSHDFSHRTTTK 243 +G + +T + RP W + +K + H R+GVF CG + L L + +S+ S Sbjct: 503 TGLKQKTLYGRPNWDNEFKTIGSQHPNTRIGVFLCGPEALADTLNKQCISNSDSGPRGVH 562 Query: 242 FVFHKENF 219 F+F+KENF Sbjct: 563 FIFNKENF 570
>CY24B_BISBI (Q95L74) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)| (Neutrophil cytochrome b 91 kDa polypeptide) (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane glycoprotein gp91phox) (Cytochrome b(558) beta chain) (Cytochrome b558 be Length = 570 Score = 49.3 bits (116), Expect = 4e-06 Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 2/68 (2%) Frame = -3 Query: 416 SGTRVRTHFARPCWRDVYKRVACDHQGQRVGVFYCGDQKLTPELRR--LSHDFSHRTTTK 243 +G + +T + RP W + +K + H R+GVF CG + L L + +S+ S Sbjct: 503 TGLKQKTLYGRPNWDNEFKTIGSQHPNTRIGVFLCGPEALADTLNKQCISNSDSGPRGVH 562 Query: 242 FVFHKENF 219 F+F+KENF Sbjct: 563 FIFNKENF 570
>CY24B_MOUSE (Q61093) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)| (Neutrophil cytochrome b 91 kDa polypeptide) (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane glycoprotein gp91phox) (Cytochrome b(558) beta chain) (Cytochrome b558 be Length = 570 Score = 48.9 bits (115), Expect = 5e-06 Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 2/68 (2%) Frame = -3 Query: 416 SGTRVRTHFARPCWRDVYKRVACDHQGQRVGVFYCGDQKLTPELRR--LSHDFSHRTTTK 243 +G + +T + RP W + +K +A +H +GVF CG + L L + +S+ S Sbjct: 503 TGLKQKTLYGRPNWDNEFKTIASEHPNTTIGVFLCGPEALAETLSKQSISNSESGPRGVH 562 Query: 242 FVFHKENF 219 F+F+KENF Sbjct: 563 FIFNKENF 570
>NOX3_MOUSE (Q672J9) NADPH oxidase 3 (EC 1.6.3.-)| Length = 568 Score = 48.9 bits (115), Expect = 5e-06 Identities = 20/68 (29%), Positives = 39/68 (57%), Gaps = 2/68 (2%) Frame = -3 Query: 416 SGTRVRTHFARPCWRDVYKRVACDHQGQRVGVFYCGDQKLTPELRRLSHDFS--HRTTTK 243 +G + + + RP W D +K++A +H +GVF+CG + ++ L+++ +S Sbjct: 501 TGLKQKAFYGRPNWNDEFKQIAYNHPSSSIGVFFCGSKAMSKTLQKMCRLYSSVDPRGVH 560 Query: 242 FVFHKENF 219 F ++KENF Sbjct: 561 FYYNKENF 568
>NOX1_RAT (Q9WV87) NADPH oxidase homolog 1 (NOX-1) (NOH-1) (NADH/NADPH| mitogenic oxidase subunit P65-MOX) (Mitogenic oxidase 1) (MOX1) Length = 563 Score = 48.1 bits (113), Expect = 8e-06 Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 2/68 (2%) Frame = -3 Query: 416 SGTRVRTHFARPCWRDVYKRVACDHQGQRVGVFYCGDQKLTPELRRLSHDFSHRTTTK-- 243 +G + +T F RP W + + R+A H VGVF CG L LR+ +S K Sbjct: 496 TGLKQKTSFGRPMWDNEFSRIATAHPKSVVGVFLCGPPTLAKSLRKCCRRYSSLDPRKVQ 555 Query: 242 FVFHKENF 219 F F+KE F Sbjct: 556 FYFNKETF 563
>DUOX2_PIG (Q8HZK2) Dual oxidase 2 precursor (EC 1.6.3.1) (EC 1.11.1.-)| (NADH/NADPH thyroid oxidase p138-tox) Length = 1545 Score = 41.6 bits (96), Expect = 7e-04 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Frame = -3 Query: 416 SGTRVRTHFARPCWRDVYKRVACDH-QGQRVGVFYCGDQKLTPELRRLSHDFSHRTTTKF 240 +G R THF RP + + + H Q +++GVF CG +T + + + + T F Sbjct: 1479 TGLRSITHFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKTCQLINRQDQTHF 1538 Query: 239 VFHKENF 219 V H ENF Sbjct: 1539 VHHYENF 1545
>DUOX1_CANFA (Q9MZF4) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-) (NADPH| thyroid oxidase 1) (Thyroid oxidase 1) Length = 1551 Score = 41.2 bits (95), Expect = 0.001 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Frame = -3 Query: 416 SGTRVRTHFARPCWRDVYKRVACDH-QGQRVGVFYCGDQKLTPELRRLSHDFSHRTTTKF 240 +G R THF RP + +K + H Q +++GVF CG +T + + + + T F Sbjct: 1485 TGLRSITHFGRPPFEPFFKSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLINRQDRTHF 1544 Query: 239 VFHKENF 219 H ENF Sbjct: 1545 SHHYENF 1551
>DUOX1_HUMAN (Q9NRD9) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-) (NADPH| thyroid oxidase 1) (Thyroid oxidase 1) (Large NOX 1) (Long NOX 1) Length = 1551 Score = 39.3 bits (90), Expect = 0.004 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Frame = -3 Query: 416 SGTRVRTHFARPCWRDVYKRVACDH-QGQRVGVFYCGDQKLTPELRRLSHDFSHRTTTKF 240 +G R THF RP + + + H Q +++GVF CG +T + + + + T F Sbjct: 1485 TGLRSITHFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLINRQDRTHF 1544 Query: 239 VFHKENF 219 H ENF Sbjct: 1545 SHHYENF 1551
>DUOX1_PIG (Q8HZK3) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-)| Length = 1553 Score = 39.3 bits (90), Expect = 0.004 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Frame = -3 Query: 416 SGTRVRTHFARPCWRDVYKRVACDH-QGQRVGVFYCGDQKLTPELRRLSHDFSHRTTTKF 240 +G R THF RP + + + H Q +++GVF CG +T + + + + T F Sbjct: 1487 TGLRSITHFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLINRQDRTHF 1546 Query: 239 VFHKENF 219 H ENF Sbjct: 1547 SHHYENF 1553
>DUOX1_RAT (Q8CIY2) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-)| Length = 1551 Score = 38.9 bits (89), Expect = 0.005 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Frame = -3 Query: 416 SGTRVRTHFARPCWRDVYKRVACDH-QGQRVGVFYCGDQKLTPELRRLSHDFSHRTTTKF 240 +G R THF RP + + + H Q +++GVF CG +T + + + + T F Sbjct: 1485 TGLRSVTHFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLINKQDRTHF 1544 Query: 239 VFHKENF 219 H ENF Sbjct: 1545 SHHYENF 1551
>DUOX2_HUMAN (Q9NRD8) Dual oxidase 2 precursor (EC 1.6.3.1) (EC 1.11.1.-) (NADPH| oxidase/peroxidase DUOX2) (NADPH thyroid oxidase 2) (Thyroid oxidase 2) (NADH/NADPH thyroid oxidase p138-tox) (p138 thyroid oxidase) (Large NOX 2) (Long NOX 2) Length = 1548 Score = 38.1 bits (87), Expect = 0.008 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Frame = -3 Query: 416 SGTRVRTHFARPCWRDVYKRVACDH-QGQRVGVFYCGDQKLTPELRRLSHDFSHRTTTKF 240 +G R THF RP + + + H Q +++GVF CG +T + + + + F Sbjct: 1482 TGLRSITHFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLVNRQDRAHF 1541 Query: 239 VFHKENF 219 + H ENF Sbjct: 1542 MHHYENF 1548
>DUOX2_RAT (Q9ES45) Dual oxidase 2 precursor (EC 1.6.3.1) (EC 1.11.1.-)| (NADH/NADPH thyroid oxidase THOX2) (Thyroid oxidase 2) (Large NOX 2) (Long NOX 2) Length = 1517 Score = 36.2 bits (82), Expect = 0.031 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = -3 Query: 416 SGTRVRTHFARPCWRDVYKRVACDH-QGQRVGVFYCGDQKLTPELRRLSHDFSHRTTTKF 240 +G R THF RP + + H Q ++GVF CG +T + + + + F Sbjct: 1451 TGLRSVTHFGRPPFELFLDSLQEVHPQVHKIGVFSCGPPGMTKNVEKACQLINRQDRAHF 1510 Query: 239 VFHKENF 219 V H ENF Sbjct: 1511 VHHYENF 1517
>DUOX_DROME (Q9VQH2) Dual oxidase (EC 1.6.3.1) (EC 1.11.1.-)| Length = 1475 Score = 33.1 bits (74), Expect = 0.27 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 2/68 (2%) Frame = -3 Query: 416 SGTRVRTHFARPCWRDVYKRVACDHQG-QRVGVFYCGDQKLTPELRRLSHDFSH-RTTTK 243 +G + HF RP K V H ++GVF CG + LT + + + R Sbjct: 1407 TGLKAVNHFGRPDMSSFLKFVQKKHSYVSKIGVFSCGPRPLTKSVMSACDEVNKTRKLPY 1466 Query: 242 FVFHKENF 219 F+ H ENF Sbjct: 1467 FIHHFENF 1474
>DUOX1_CAEEL (O61213) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-) (DUOX1)| (NADPH thyroid oxidase 1) (Blistered cuticle protein 3) Length = 1497 Score = 33.1 bits (74), Expect = 0.27 Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 10/67 (14%) Frame = -3 Query: 416 SGTRVRTHFARPCWRDVYKRVACDHQGQ-RVGVFYCGDQKLTPEL---------RRLSHD 267 +G + HF RP ++ ++ + +H+ Q ++GVF CG L + +R + Sbjct: 1430 TGLHAKNHFGRPNFKAFFQFIQSEHKEQSKIGVFSCGPVNLNESIAEGCADANRQRDAPS 1489 Query: 266 FSHRTTT 246 F+HR T Sbjct: 1490 FAHRFET 1496 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,867,453 Number of Sequences: 219361 Number of extensions: 955110 Number of successful extensions: 1813 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 1786 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1812 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2228238148 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
