>TIP12_ORYSA (Q94CS9) Probable aquaporin TIP1.2 (Tonoplast intrinsic protein|
           1.2) (OsTIP1.2)
          Length = 252

 Score = 34.3 bits (77), Expect = 0.074
 Identities = 13/15 (86%), Positives = 15/15 (100%)
 Frame = -3

Query: 389 FIGQRPHEQLPTAEY 345
           FIGQRPH+QLPTA+Y
Sbjct: 238 FIGQRPHDQLPTADY 252

>SYV_BUCAI (P57447) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 955

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 8/54 (14%)
 Frame = +3

Query: 117 INLDHGIEAFITEDVHQDKRLFLTDSHTV-----YPEF---LKDKRVTMKLNWL 254
           + L H I  FITE + Q  +L    S        +PE+   L DK++ +++NW+
Sbjct: 747 LKLAHPIMPFITETIWQRIKLIQNISEKTIMLQDFPEYNHKLFDKKILVQMNWM 800

>PRP28_DEBHA (Q6BLU9) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC|
           3.6.1.-)
          Length = 580

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 19/63 (30%), Positives = 31/63 (49%)
 Frame = +3

Query: 30  YVVTGQKPEHVHKIGKTSNC*DRQQICTNINLDHGIEAFITEDVHQDKRLFLTDSHTVYP 209
           Y +T +  E++H+IG+T    ++   CT I+ D   E F+      D + FL       P
Sbjct: 512 YQMTKKFDEYIHRIGRTGRAGNKGTSCTFID-DGDSEVFL------DLKKFLNKGKKKCP 564

Query: 210 EFL 218
           E+L
Sbjct: 565 EWL 567

>E4PD_SHIFL (P0A9B9) D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.-) (E4PDH)|
          Length = 338

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 271 HLLDFSISHGDDAWMIRRDSD 333
           HLL +  SHG  AW +R++ D
Sbjct: 45  HLLKYDTSHGRFAWEVRQERD 65

>E4PD_ECOLI (P0A9B6) D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.-) (E4PDH)|
          Length = 338

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 271 HLLDFSISHGDDAWMIRRDSD 333
           HLL +  SHG  AW +R++ D
Sbjct: 45  HLLKYDTSHGRFAWEVRQERD 65

>E4PD_ECOL6 (P0A9B7) D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.-) (E4PDH)|
          Length = 338

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 271 HLLDFSISHGDDAWMIRRDSD 333
           HLL +  SHG  AW +R++ D
Sbjct: 45  HLLKYDTSHGRFAWEVRQERD 65

>E4PD_ECO57 (P0A9B8) D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.-) (E4PDH)|
          Length = 338

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 271 HLLDFSISHGDDAWMIRRDSD 333
           HLL +  SHG  AW +R++ D
Sbjct: 45  HLLKYDTSHGRFAWEVRQERD 65

>DUOX_DROME (Q9VQH2) Dual oxidase (EC 1.6.3.1) (EC 1.11.1.-)|
          Length = 1475

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1

Query: 127 SRLMFVQICCLS*QFDVLPILCTCSGFCPV 38
           S LMF+ +C        +PILC  +G+C V
Sbjct: 563 SELMFIYVCVF---LGFVPILCAGAGYCVV 589

>NFYB5_ARATH (O82248) Nuclear transcription factor Y subunit B-5 (AtNF-YB-5)|
          Length = 160

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 6   IKNACHRYYVVTGQKPEHVHKIGKTSN 86
           +K   HRY V+ G+KP H  K G  S+
Sbjct: 131 LKKYLHRYRVLEGEKPNHHGKGGPKSS 157

>DPO4_METAC (Q8TIW3) DNA polymerase IV (EC 2.7.7.7) (Pol IV)|
          Length = 366

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 16/45 (35%), Positives = 26/45 (57%)
 Frame = +1

Query: 40  QDKSQSMYTRLARHQIARTDSRFVQTLILTME*KHS*LRTYTKTR 174
           Q+   S+  +LA   I + DSR +   ++T+   +S  RTYTK+R
Sbjct: 269 QELILSLLEKLAGDVIEKLDSRELSFRVVTVTVINSNFRTYTKSR 313


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,570,724
Number of Sequences: 219361
Number of extensions: 820841
Number of successful extensions: 1642
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1642
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 1380984984
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)