ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart26c10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DGKE_MOUSE (Q9R1C6) Diacylglycerol kinase epsilon (EC 2.7.1.107)... 29 5.9

>DGKE_MOUSE (Q9R1C6) Diacylglycerol kinase epsilon (EC 2.7.1.107) (Diglyceride|
           kinase epsilon) (DGK-epsilon) (DAG kinase epsilon)
          Length = 564

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = -3

Query: 163 CFNLYFCRPSCCSQPESCVF--LWCTEYIY 80
           C    FCR  C SQP+ C +  +WC + ++
Sbjct: 132 CSYCVFCRQQCGSQPKLCDYRCIWCQKTVH 161


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,795,452
Number of Sequences: 219361
Number of extensions: 1335590
Number of successful extensions: 2793
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2790
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3420806017
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top