>emb|BX511184.11| Zebrafish DNA sequence from clone DKEY-103A3 in linkage group 24,
             complete sequence
          Length = 209735

 Score = 40.1 bits (20), Expect = 0.51
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     caaaccaaaaaagagctccc 20
             ||||||||||||||||||||
Sbjct: 74526 caaaccaaaaaagagctccc 74545

>emb|BX005185.5| Zebrafish DNA sequence from clone CH211-132N11 in linkage group 24,
              complete sequence
          Length = 164521

 Score = 40.1 bits (20), Expect = 0.51
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      caaaccaaaaaagagctccc 20
              ||||||||||||||||||||
Sbjct: 102206 caaaccaaaaaagagctccc 102225

>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 38.2 bits (19), Expect = 2.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 35      accgttcttgtacagctcg 53
               |||||||||||||||||||
Sbjct: 3761024 accgttcttgtacagctcg 3761006

>gb|AY424691.1| Homo sapiens T-cell receptor beta chain variable region mRNA,
           partial cds
          Length = 354

 Score = 36.2 bits (18), Expect = 8.0
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                 
Query: 5   ccaaaaaagagctccccgttct 26
           |||||||| |||||||||||||
Sbjct: 158 ccaaaaaacagctccccgttct 137

>ref|XM_753111.1| Ustilago maydis 521 hypothetical protein (UM02057.1) partial mRNA
          Length = 1827

 Score = 36.2 bits (18), Expect = 8.0
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 36   ccgttcttgtacagctcg 53
            ||||||||||||||||||
Sbjct: 1289 ccgttcttgtacagctcg 1272

>emb|Z97353.3|HS90L6 Human DNA sequence from clone RP1-90L6 on chromosome 22q11.21-11.23,
              complete sequence
          Length = 190837

 Score = 36.2 bits (18), Expect = 8.0
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 7      aaaaaagagctccccgtt 24
              ||||||||||||||||||
Sbjct: 127763 aaaaaagagctccccgtt 127780

>gb|AY152830.1| Felis catus clone BAC 463h11 major histocompatiblity complex classical
             class II region, partial sequence
          Length = 141214

 Score = 36.2 bits (18), Expect = 8.0
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 2     aaaccaaaaaagagctcc 19
             ||||||||||||||||||
Sbjct: 37743 aaaccaaaaaagagctcc 37726

>gb|AY152829.1| Felis catus clone PAC f23 major histocompatiblity complex classical
             class II region, partial sequence
          Length = 69476

 Score = 36.2 bits (18), Expect = 8.0
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 2     aaaccaaaaaagagctcc 19
             ||||||||||||||||||
Sbjct: 45275 aaaccaaaaaagagctcc 45258

>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16
          Length = 347137

 Score = 36.2 bits (18), Expect = 8.0
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 37     cgttcttgtacagctcgg 54
              ||||||||||||||||||
Sbjct: 102520 cgttcttgtacagctcgg 102537

>emb|BX640433.1| Bordetella parapertussis strain 12822, complete genome; segment 11/14
          Length = 349305

 Score = 36.2 bits (18), Expect = 8.0
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 37    cgttcttgtacagctcgg 54
             ||||||||||||||||||
Sbjct: 39005 cgttcttgtacagctcgg 39022

>emb|BX640418.1| Bordetella pertussis strain Tohama I, complete genome; segment 8/12
          Length = 349346

 Score = 36.2 bits (18), Expect = 8.0
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 37     cgttcttgtacagctcgg 54
              ||||||||||||||||||
Sbjct: 103599 cgttcttgtacagctcgg 103616

>gb|AC090642.11| Homo sapiens 12 BAC RP11-463N10 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 177607

 Score = 36.2 bits (18), Expect = 8.0
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 3      aaccaaaaaagagctccc 20
              ||||||||||||||||||
Sbjct: 123219 aaccaaaaaagagctccc 123202

>gb|AC114316.2| Homo sapiens chromosome 5 clone RP11-348J24, complete sequence
          Length = 187136

 Score = 36.2 bits (18), Expect = 8.0
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 2      aaaccaaaaaagagctcc 19
              ||||||||||||||||||
Sbjct: 106267 aaaccaaaaaagagctcc 106284

>gb|AC108931.4| Homo sapiens BAC clone RP11-284E20 from 4, complete sequence
          Length = 114175

 Score = 36.2 bits (18), Expect = 8.0
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 3      aaccaaaaaagagctccc 20
              ||||||||||||||||||
Sbjct: 109111 aaccaaaaaagagctccc 109128

>gb|AC087774.27| Homo sapiens 12p BAC RP11-633O13 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 184000

 Score = 36.2 bits (18), Expect = 8.0
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 3    aaccaaaaaagagctccc 20
            ||||||||||||||||||
Sbjct: 3773 aaccaaaaaagagctccc 3790

>gb|AC090810.14| Homo sapiens chromosome 8, clone RP11-48J8, complete sequence
          Length = 168587

 Score = 36.2 bits (18), Expect = 8.0
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 3     aaccaaaaaagagctccc 20
             ||||||||||||||||||
Sbjct: 83509 aaccaaaaaagagctccc 83526

>gb|AC138990.2| Homo sapiens chromosome 5 clone RP13-708P15, complete sequence
          Length = 125439

 Score = 36.2 bits (18), Expect = 8.0
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 2     aaaccaaaaaagagctcc 19
             ||||||||||||||||||
Sbjct: 11924 aaaccaaaaaagagctcc 11907

>gb|AF254745.1| Ustilago maydis UDP-glucose:sterol glucosyltransferase Ugt51D1
            (UGT51D1) gene, partial cds
          Length = 3161

 Score = 36.2 bits (18), Expect = 8.0
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 36   ccgttcttgtacagctcg 53
            ||||||||||||||||||
Sbjct: 2839 ccgttcttgtacagctcg 2856

>gb|U86079.1|AAU86079 Aedes aegypti hexamerin 1 gamma (HEX1g) mRNA, partial cds
          Length = 2112

 Score = 36.2 bits (18), Expect = 8.0
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 39   ttcttgtacagctcggtg 56
            ||||||||||||||||||
Sbjct: 1649 ttcttgtacagctcggtg 1632

>ref|XM_311376.2| Anopheles gambiae str. PEST ENSANGP00000016795 (ENSANGG00000014306),
            partial mRNA
          Length = 1974

 Score = 36.2 bits (18), Expect = 8.0
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 39   ttcttgtacagctcggtg 56
            ||||||||||||||||||
Sbjct: 1625 ttcttgtacagctcggtg 1608

>gb|AC169371.2| Sorghum bicolor clone SB_BBc0127F08, complete sequence
          Length = 70712

 Score = 36.2 bits (18), Expect = 8.0
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 33    ccaccgttcttgtacagc 50
             ||||||||||||||||||
Sbjct: 17823 ccaccgttcttgtacagc 17840

>dbj|AP002783.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-664H7, complete
             sequence
          Length = 167026

 Score = 36.2 bits (18), Expect = 8.0
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 3     aaccaaaaaagagctccc 20
             ||||||||||||||||||
Sbjct: 27299 aaccaaaaaagagctccc 27282


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 507,460
Number of Sequences: 3902068
Number of extensions: 507460
Number of successful extensions: 137806
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 137733
Number of HSP's gapped (non-prelim): 73
length of query: 56
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 36
effective length of database: 17,155,003,908
effective search space: 617580140688
effective search space used: 617580140688
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)