ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart26c05 |
|---|---|
| Clone Library Name | barley_pub |
>YB2A_SCHPO (P87311) Hypothetical zinc finger MYND domain-containing protein| C31F10.10c Length = 574 Score = 42.7 bits (99), Expect = 5e-04 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = -2 Query: 373 GGLRLCSHALCGRPETRRHEFRRCSVCGVVNYCSRACQALHW 248 GG+R C++ LC + E +F +C C YCS+ CQ W Sbjct: 475 GGIRRCANLLCNKWEEHSRQFAKCRRCRRTKYCSKECQHQAW 516
>PDCD2_MOUSE (P46718) Programmed cell death protein 2 (Zinc finger protein Rp-8)| Length = 343 Score = 40.8 bits (94), Expect = 0.002 Identities = 20/54 (37%), Positives = 25/54 (46%) Frame = -2 Query: 370 GLRLCSHALCGRPETRRHEFRRCSVCGVVNYCSRACQALHWKMAHKAECTPMDR 209 G LC C P T CS C +YCS+ Q L W++ HK CT D+ Sbjct: 130 GAHLCRVCGCLAPMT-------CSRCKQAHYCSKEHQTLDWRLGHKQACTQSDK 176
>YRM4_CAEEL (Q09415) Hypothetical protein R06F6.4 in chromosome II| Length = 429 Score = 40.8 bits (94), Expect = 0.002 Identities = 17/40 (42%), Positives = 23/40 (57%) Frame = -2 Query: 343 CGRPETRRHEFRRCSVCGVVNYCSRACQALHWKMAHKAEC 224 C + T E ++CS C + YCS+ CQ WK+ HK EC Sbjct: 26 CNQCLTSMAELKKCSACRRLAYCSQECQRADWKL-HKVEC 64
>PDCD2_RAT (P47816) Programmed cell death protein 2 (Zinc finger protein Rp-8)| (Fragment) Length = 287 Score = 39.7 bits (91), Expect = 0.005 Identities = 20/53 (37%), Positives = 24/53 (45%) Frame = -2 Query: 370 GLRLCSHALCGRPETRRHEFRRCSVCGVVNYCSRACQALHWKMAHKAECTPMD 212 G LC C P T CS C +YCS+ Q L W++ HK CT D Sbjct: 74 GAHLCRVCGCLAPMT-------CSRCKQAHYCSKEHQTLDWQLGHKQACTQSD 119
>YMZ0_YEAST (Q03162) Hypothetical 72.2 kDa protein in SNZ1-YPK2 intergenic| region Length = 620 Score = 39.7 bits (91), Expect = 0.005 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = -2 Query: 370 GLRLCSHALCGRPETRRHEFRRCSVCGVVNYCSRACQALHW 248 G+R C++ CG+ E +F +C C YCSR CQ W Sbjct: 508 GVRQCANFSCGKWEDFPRQFAKCRRCKRTKYCSRKCQLKAW 548
>ASHR1_ARATH (Q7XJS0) Histone-lysine N-methyltransferase ASHR1 (EC 2.1.1.43)| (ASH1-related protein 1) (Protein SET DOMAIN GROUP 37) Length = 480 Score = 38.9 bits (89), Expect = 0.008 Identities = 15/39 (38%), Positives = 23/39 (58%) Frame = -2 Query: 325 RRHEFRRCSVCGVVNYCSRACQALHWKMAHKAECTPMDR 209 + + ++CS C VV YC +CQ WK+ H+ EC + R Sbjct: 61 KTNNLKKCSACQVVWYCGSSCQKSEWKL-HRDECKALTR 98
>SMYD1_HUMAN (Q8NB12) SET and MYND domain-containing protein 1| Length = 490 Score = 37.4 bits (85), Expect = 0.023 Identities = 15/40 (37%), Positives = 22/40 (55%) Frame = -2 Query: 325 RRHEFRRCSVCGVVNYCSRACQALHWKMAHKAECTPMDRW 206 R+ + RC C +YC R CQ W + HK EC+ + R+ Sbjct: 58 RQEKLHRCGQCKFAHYCDRTCQKDAW-LNHKNECSAIKRY 96
>UBP19_HUMAN (O94966) Ubiquitin carboxyl-terminal hydrolase 19 (EC 3.1.2.15)| (Ubiquitin thioesterase 19) (Ubiquitin-specific-processing protease 19) (Deubiquitinating enzyme 19) (Zinc finger MYND domain-containing protein 9) (Fragment) Length = 1371 Score = 37.4 bits (85), Expect = 0.023 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%) Frame = -2 Query: 349 ALCGRPETRRHE-FRRCSVCGVVNYCSRACQALHWKMAHKAECTP 218 A C R + E +RC+ C V YC++ CQ HW HK C P Sbjct: 845 AACQRKQQSEDEKLKRCTRCYRVGYCNQLCQKTHWP-DHKGLCRP 888
>PDCD2_HUMAN (Q16342) Programmed cell death protein 2 (Zinc finger protein Rp-8)| (Zinc finger MYND domain-containing protein 7) Length = 344 Score = 37.4 bits (85), Expect = 0.023 Identities = 19/53 (35%), Positives = 23/53 (43%) Frame = -2 Query: 370 GLRLCSHALCGRPETRRHEFRRCSVCGVVNYCSRACQALHWKMAHKAECTPMD 212 G LC C P+T CS C YCS+ Q L W++ HK C D Sbjct: 131 GAHLCRVCGCLGPKT-------CSRCHKAYYCSKEHQTLDWRLGHKQACAQPD 176
>ZMY19_RAT (Q7TSV3) Zinc finger MYND domain-containing protein 19| (Melanin-concentrating hormone receptor 1-interacting zinc-finger protein) (MCH-R1-interacting zinc-finger protein) Length = 227 Score = 36.6 bits (83), Expect = 0.039 Identities = 18/50 (36%), Positives = 20/50 (40%) Frame = -2 Query: 358 CSHALCGRPETRRHEFRRCSVCGVVNYCSRACQALHWKMAHKAECTPMDR 209 C + C E + EF C C V YC CQ W AHK C R Sbjct: 169 CHYPPCTVIEKQLREFNICGRCQVARYCGSQCQQKDWP-AHKKHCRERKR 217
>ZMY19_MOUSE (Q9CQG3) Zinc finger MYND domain-containing protein 19| (Melanin-concentrating hormone receptor 1-interacting zinc-finger protein) (MCH-R1-interacting zinc-finger protein) Length = 227 Score = 36.6 bits (83), Expect = 0.039 Identities = 18/50 (36%), Positives = 20/50 (40%) Frame = -2 Query: 358 CSHALCGRPETRRHEFRRCSVCGVVNYCSRACQALHWKMAHKAECTPMDR 209 C + C E + EF C C V YC CQ W AHK C R Sbjct: 169 CHYPPCTVIEKQLREFNICGRCQVARYCGSQCQQKDWP-AHKKHCRERKR 217
>ZMY19_HUMAN (Q96E35) Zinc finger MYND domain-containing protein 19| (Melanin-concentrating hormone receptor 1-interacting zinc-finger protein) (MCH-R1-interacting zinc-finger protein) Length = 227 Score = 36.6 bits (83), Expect = 0.039 Identities = 18/50 (36%), Positives = 20/50 (40%) Frame = -2 Query: 358 CSHALCGRPETRRHEFRRCSVCGVVNYCSRACQALHWKMAHKAECTPMDR 209 C + C E + EF C C V YC CQ W AHK C R Sbjct: 169 CHYPPCTVIEKQLREFNICGRCQVARYCGSQCQQKDWP-AHKKHCRERKR 217
>SMYD2_HUMAN (Q9NRG4) SET and MYND domain-containing protein 2 (HSKM-B)| Length = 433 Score = 36.6 bits (83), Expect = 0.039 Identities = 16/38 (42%), Positives = 20/38 (52%) Frame = -2 Query: 328 TRRHEFRRCSVCGVVNYCSRACQALHWKMAHKAECTPM 215 TR+ +C C YC+ CQ W M HK EC+PM Sbjct: 57 TRKEGLSKCGRCKQAFYCNVECQKEDWPM-HKLECSPM 93
>SMYD3_HUMAN (Q9H7B4) SET and MYND domain-containing protein 3 (EC 2.1.1.43)| (Zinc finger MYND domain-containing protein 1) Length = 428 Score = 36.6 bits (83), Expect = 0.039 Identities = 17/41 (41%), Positives = 20/41 (48%) Frame = -2 Query: 346 LCGRPETRRHEFRRCSVCGVVNYCSRACQALHWKMAHKAEC 224 +C R + + RCS C V YCS CQ W HK EC Sbjct: 48 VCDRCLLGKEKLMRCSQCRVAKYCSAKCQKKAWP-DHKREC 87
>SMYD1_MOUSE (P97443) SET and MYND domain-containing protein 1 (Zinc-finger| protein BOP) (m-BOP) (CD8b-opposite) Length = 485 Score = 35.8 bits (81), Expect = 0.066 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = -2 Query: 325 RRHEFRRCSVCGVVNYCSRACQALHWKMAHKAECTPMDRW 206 R+ + RC C +YC R CQ W + HK EC + ++ Sbjct: 53 RQEKLHRCGQCKFAHYCDRTCQKDAW-LNHKNECAAIKKY 91
>SMYD3_MOUSE (Q9CWR2) SET and MYND domain-containing protein 3 (EC 2.1.1.43)| (Zinc finger MYND domain-containing protein 1) Length = 428 Score = 35.4 bits (80), Expect = 0.086 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = -2 Query: 346 LCGRPETRRHEFRRCSVCGVVNYCSRACQALHWKMAHKAECT 221 +C R + + RCS C + YCS CQ W H+ EC+ Sbjct: 48 VCDRCLLGKEKLMRCSQCRIAKYCSAKCQKKAWP-DHRRECS 88
>DEAF1_DROME (Q24180) Deformed epidermal autoregulatory factor 1 (Protein| DEAF-1) Length = 576 Score = 35.0 bits (79), Expect = 0.11 Identities = 15/34 (44%), Positives = 17/34 (50%) Frame = -2 Query: 322 RHEFRRCSVCGVVNYCSRACQALHWKMAHKAECT 221 R CS+C YCS CQ W AH+ ECT Sbjct: 526 REALAECSLCRKTPYCSEFCQRKDWN-AHQVECT 558
>ZMY10_MOUSE (Q99ML0) Zinc finger MYND domain-containing protein 10 (BLu| protein) Length = 440 Score = 32.3 bits (72), Expect = 0.73 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = -2 Query: 310 RRCSVCGVVNYCSRACQALHWK 245 +RCS C V YC R CQ HW+ Sbjct: 403 KRCSRCQNVWYCCRECQVKHWE 424
>SMYD4_PONPY (Q5R5X9) SET and MYND domain-containing protein 4| Length = 804 Score = 32.3 bits (72), Expect = 0.73 Identities = 10/27 (37%), Positives = 14/27 (51%) Frame = -2 Query: 304 CSVCGVVNYCSRACQALHWKMAHKAEC 224 C C YCS+ C W++ H+ EC Sbjct: 309 CDGCSYAKYCSQECLQQAWELYHRTEC 335
>SMYD4_HUMAN (Q8IYR2) SET and MYND domain-containing protein 4| Length = 804 Score = 32.3 bits (72), Expect = 0.73 Identities = 10/27 (37%), Positives = 14/27 (51%) Frame = -2 Query: 304 CSVCGVVNYCSRACQALHWKMAHKAEC 224 C C YCS+ C W++ H+ EC Sbjct: 309 CDGCSYAKYCSQECLQQAWELYHRTEC 335
>SMYD4_MOUSE (Q8BTK5) SET and MYND domain-containing protein 4| Length = 799 Score = 32.3 bits (72), Expect = 0.73 Identities = 10/28 (35%), Positives = 13/28 (46%) Frame = -2 Query: 304 CSVCGVVNYCSRACQALHWKMAHKAECT 221 C C YCS+ C W + H EC+ Sbjct: 309 CGSCSYAKYCSQECMQQAWDLYHSTECS 336
>SMYD4_CHICK (Q5F3V0) SET and MYND domain-containing protein 4| Length = 742 Score = 32.0 bits (71), Expect = 0.95 Identities = 10/27 (37%), Positives = 14/27 (51%) Frame = -2 Query: 304 CSVCGVVNYCSRACQALHWKMAHKAEC 224 C C YCS+ C + W+ H+ EC Sbjct: 308 CCGCSYAKYCSQNCADVAWEQYHRTEC 334
>GUNA_XANCP (P19487) Major extracellular endoglucanase precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Cellulase) Length = 484 Score = 31.2 bits (69), Expect = 1.6 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -3 Query: 213 TGGSTAPTLTPTPMPSPWP 157 T G+T PT TPTP P+P P Sbjct: 371 TAGNTTPTPTPTPTPTPTP 389
>DEAF1_PANTR (O77562) Deformed epidermal autoregulatory factor 1 homolog| (Nuclear DEAF-1-related transcriptional regulator) (NUDR) Length = 565 Score = 31.2 bits (69), Expect = 1.6 Identities = 12/26 (46%), Positives = 13/26 (50%) Frame = -2 Query: 322 RHEFRRCSVCGVVNYCSRACQALHWK 245 R C+ C VNYCS CQ WK Sbjct: 509 REAMNECTGCHKVNYCSTFCQRKDWK 534
>DEAF1_RAT (O88450) Deformed epidermal autoregulatory factor 1 homolog| (Nuclear DEAF-1-related transcriptional regulator) (NUDR) (Suppressin) Length = 565 Score = 30.8 bits (68), Expect = 2.1 Identities = 12/26 (46%), Positives = 13/26 (50%) Frame = -2 Query: 322 RHEFRRCSVCGVVNYCSRACQALHWK 245 R C+ C VNYCS CQ WK Sbjct: 509 REAMSECTGCHKVNYCSTFCQRKDWK 534
>DEAF1_HUMAN (O75398) Deformed epidermal autoregulatory factor 1 homolog| (Nuclear DEAF-1-related transcriptional regulator) (NUDR) (Suppressin) (Zinc finger MYND domain-containing protein 5) Length = 565 Score = 30.8 bits (68), Expect = 2.1 Identities = 12/26 (46%), Positives = 13/26 (50%) Frame = -2 Query: 322 RHEFRRCSVCGVVNYCSRACQALHWK 245 R C+ C VNYCS CQ WK Sbjct: 509 REAMSECTGCHKVNYCSTFCQRKDWK 534
>DEAF1_MOUSE (Q9Z1T5) Deformed epidermal autoregulatory factor 1 homolog| (Nuclear DEAF-1-related transcriptional regulator) (NUDR) Length = 566 Score = 30.8 bits (68), Expect = 2.1 Identities = 12/26 (46%), Positives = 13/26 (50%) Frame = -2 Query: 322 RHEFRRCSVCGVVNYCSRACQALHWK 245 R C+ C VNYCS CQ WK Sbjct: 510 REAMSECTGCHKVNYCSTFCQRKDWK 535
>ZMY11_MOUSE (Q8R5C8) Zinc finger MYND domain-containing protein 11| Length = 562 Score = 30.4 bits (67), Expect = 2.8 Identities = 11/24 (45%), Positives = 12/24 (50%) Frame = -2 Query: 295 CGVVNYCSRACQALHWKMAHKAEC 224 C +YCS CQ HW HK C Sbjct: 535 CWNTSYCSIKCQQEHWHAEHKRTC 558
>ZMY11_HUMAN (Q15326) Zinc finger MYND domain-containing protein 11 (Adenovirus| 5 E1A-binding protein) (BS69 protein) Length = 562 Score = 30.4 bits (67), Expect = 2.8 Identities = 11/24 (45%), Positives = 12/24 (50%) Frame = -2 Query: 295 CGVVNYCSRACQALHWKMAHKAEC 224 C +YCS CQ HW HK C Sbjct: 535 CWNTSYCSIKCQQEHWHAEHKRTC 558
>ZMY10_HUMAN (O75800) Zinc finger MYND domain-containing protein 10 (BLu| protein) Length = 440 Score = 30.0 bits (66), Expect = 3.6 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = -2 Query: 310 RRCSVCGVVNYCSRACQALHWK 245 +RCS C YC R CQ HW+ Sbjct: 403 KRCSRCQNEWYCCRECQVKHWE 424
>SMYD2_RAT (Q7M6Z3) SET and MYND domain-containing protein 2| Length = 433 Score = 30.0 bits (66), Expect = 3.6 Identities = 13/37 (35%), Positives = 17/37 (45%) Frame = -2 Query: 325 RRHEFRRCSVCGVVNYCSRACQALHWKMAHKAECTPM 215 R+ +C C YC CQ W + HK EC+ M Sbjct: 58 RKEGLSKCGRCKQAFYCDVECQKEDWPL-HKLECSSM 93
>SMYD2_MOUSE (Q8R5A0) SET and MYND domain-containing protein 2| Length = 433 Score = 30.0 bits (66), Expect = 3.6 Identities = 13/37 (35%), Positives = 17/37 (45%) Frame = -2 Query: 325 RRHEFRRCSVCGVVNYCSRACQALHWKMAHKAECTPM 215 R+ +C C YC CQ W + HK EC+ M Sbjct: 58 RKEGLSKCGRCKQAFYCDVECQKEDWPL-HKLECSSM 93
>MTG8R_MOUSE (O70374) Protein CBFA2T2 (MTG8-like protein) (MTG8-related protein| 1) Length = 574 Score = 29.6 bits (65), Expect = 4.7 Identities = 12/37 (32%), Positives = 16/37 (43%) Frame = -2 Query: 343 CGRPETRRHEFRRCSVCGVVNYCSRACQALHWKMAHK 233 CGR + CS C + YC CQ W+ H+ Sbjct: 481 CGRKASET-----CSGCNIARYCGSFCQHKDWERHHR 512
>SELV_HUMAN (P59797) Selenoprotein V| Length = 346 Score = 29.6 bits (65), Expect = 4.7 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = -3 Query: 204 STAPTLTPTPMPSPWPLRRCNRRRVLPPV 118 ++ PT TPTP+ +P P+R R L PV Sbjct: 21 ASTPTRTPTPLRTPTPVRTRTPIRTLTPV 49
>MTG8R_HUMAN (O43439) Protein CBFA2T2 (MTG8-like protein) (MTG8-related protein| 1) (Myeloid translocation-related protein 1) (ETO homologous on chromosome 20) (p85) Length = 604 Score = 29.6 bits (65), Expect = 4.7 Identities = 12/37 (32%), Positives = 16/37 (43%) Frame = -2 Query: 343 CGRPETRRHEFRRCSVCGVVNYCSRACQALHWKMAHK 233 CGR + CS C + YC CQ W+ H+ Sbjct: 510 CGRKASET-----CSGCNIARYCGSFCQHKDWERHHR 541
>MTG8R_XENLA (Q9IAB2) Protein CBFA2T2 (MTG8-like protein) (MTG8-related protein| 1) Length = 586 Score = 29.6 bits (65), Expect = 4.7 Identities = 12/37 (32%), Positives = 16/37 (43%) Frame = -2 Query: 343 CGRPETRRHEFRRCSVCGVVNYCSRACQALHWKMAHK 233 CGR + CS C + YC CQ W+ H+ Sbjct: 500 CGRKASET-----CSGCNIARYCGSFCQHKDWEKHHR 531
>ATXR2_ARATH (Q5PP37) Histone-lysine N-methyltransferase ATXR2 (EC 2.1.1.43)| (Trithorax-related protein 2) (TRX-related protein 2) (Protein SET DOMAIN GROUP 36) Length = 473 Score = 28.9 bits (63), Expect = 8.1 Identities = 10/25 (40%), Positives = 13/25 (52%) Frame = -2 Query: 295 CGVVNYCSRACQALHWKMAHKAECT 221 C YCS +C A W+ +H CT Sbjct: 180 CQEAFYCSESCAAADWESSHSLLCT 204 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,699,231 Number of Sequences: 219361 Number of extensions: 820599 Number of successful extensions: 3950 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 3253 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3842 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3581144924 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
