Clone Name | rbart26c05 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_472267.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1188 Score = 262 bits (132), Expect = 1e-66 Identities = 159/168 (94%) Strand = Plus / Minus Query: 200 gtcgagccaccggtccatgggcgtgcactcggccttgtgcgccatcttccagtgcagcgc 259 |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 1128 gtcgagccaccggtccatgggcgtgcactccgccttgtgcgccgtcttccagtgcagcgc 1069 Query: 260 ctggcacgcgcgcgagcagtagttcaccacgccgcacacggagcaccgccggaactcgtg 319 ||||||||| || |||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 1068 ctggcacgcccgggagcagtagttcaccacgccgcacaccgagcagcgccggaactcgtg 1009 Query: 320 ccgccgcgtctccggccgaccgcacagcgcgtgcgagcacagccgcag 367 ||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 1008 gcgccgcgtctccggccgcccgcacagcgcgtgcgagcacaggcgcag 961 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 426 agcggccgcgacgcgaaccactcgacgaggaaccggttggcggcatgcgcctcgccg 482 ||||| |||||||||||||| ||||||||||| ||||||||||| |||||||||||| Sbjct: 890 agcgggcgcgacgcgaaccagtcgacgaggaagcggttggcggcgtgcgcctcgccg 834
>emb|AL731619.3|OSJN00267 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084N21, complete sequence Length = 143093 Score = 262 bits (132), Expect = 1e-66 Identities = 159/168 (94%) Strand = Plus / Plus Query: 200 gtcgagccaccggtccatgggcgtgcactcggccttgtgcgccatcttccagtgcagcgc 259 |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 132563 gtcgagccaccggtccatgggcgtgcactccgccttgtgcgccgtcttccagtgcagcgc 132622 Query: 260 ctggcacgcgcgcgagcagtagttcaccacgccgcacacggagcaccgccggaactcgtg 319 ||||||||| || |||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 132623 ctggcacgcccgggagcagtagttcaccacgccgcacaccgagcagcgccggaactcgtg 132682 Query: 320 ccgccgcgtctccggccgaccgcacagcgcgtgcgagcacagccgcag 367 ||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 132683 gcgccgcgtctccggccgcccgcacagcgcgtgcgagcacaggcgcag 132730 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 426 agcggccgcgacgcgaaccactcgacgaggaaccggttggcggcatgcgcctcgccg 482 ||||| |||||||||||||| ||||||||||| ||||||||||| |||||||||||| Sbjct: 132801 agcgggcgcgacgcgaaccagtcgacgaggaagcggttggcggcgtgcgcctcgccg 132857
>emb|AL731601.3|OSJN00245 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0044M19, complete sequence Length = 188317 Score = 262 bits (132), Expect = 1e-66 Identities = 159/168 (94%) Strand = Plus / Plus Query: 200 gtcgagccaccggtccatgggcgtgcactcggccttgtgcgccatcttccagtgcagcgc 259 |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 8575 gtcgagccaccggtccatgggcgtgcactccgccttgtgcgccgtcttccagtgcagcgc 8634 Query: 260 ctggcacgcgcgcgagcagtagttcaccacgccgcacacggagcaccgccggaactcgtg 319 ||||||||| || |||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 8635 ctggcacgcccgggagcagtagttcaccacgccgcacaccgagcagcgccggaactcgtg 8694 Query: 320 ccgccgcgtctccggccgaccgcacagcgcgtgcgagcacagccgcag 367 ||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 8695 gcgccgcgtctccggccgcccgcacagcgcgtgcgagcacaggcgcag 8742 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 426 agcggccgcgacgcgaaccactcgacgaggaaccggttggcggcatgcgcctcgccg 482 ||||| |||||||||||||| ||||||||||| ||||||||||| |||||||||||| Sbjct: 8813 agcgggcgcgacgcgaaccagtcgacgaggaagcggttggcggcgtgcgcctcgccg 8869
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 262 bits (132), Expect = 1e-66 Identities = 159/168 (94%) Strand = Plus / Plus Query: 200 gtcgagccaccggtccatgggcgtgcactcggccttgtgcgccatcttccagtgcagcgc 259 |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 18916653 gtcgagccaccggtccatgggcgtgcactccgccttgtgcgccgtcttccagtgcagcgc 18916712 Query: 260 ctggcacgcgcgcgagcagtagttcaccacgccgcacacggagcaccgccggaactcgtg 319 ||||||||| || |||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 18916713 ctggcacgcccgggagcagtagttcaccacgccgcacaccgagcagcgccggaactcgtg 18916772 Query: 320 ccgccgcgtctccggccgaccgcacagcgcgtgcgagcacagccgcag 367 ||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 18916773 gcgccgcgtctccggccgcccgcacagcgcgtgcgagcacaggcgcag 18916820 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 426 agcggccgcgacgcgaaccactcgacgaggaaccggttggcggcatgcgcctcgccg 482 ||||| |||||||||||||| ||||||||||| ||||||||||| |||||||||||| Sbjct: 18916891 agcgggcgcgacgcgaaccagtcgacgaggaagcggttggcggcgtgcgcctcgccg 18916947
>gb|AC148759.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0030K09, complete sequence Length = 143355 Score = 163 bits (82), Expect = 7e-37 Identities = 124/138 (89%) Strand = Plus / Minus Query: 245 cttccagtgcagcgcctggcacgcgcgcgagcagtagttcaccacgccgcacacggagca 304 |||||||| ||||||||||||||||||||||||||| | | |||||||||| ||||| Sbjct: 101426 cttccagtcgagcgcctggcacgcgcgcgagcagtagctggcggcgccgcacaccgagca 101367 Query: 305 ccgccggaactcgtgccgccgcgtctccggccgaccgcacagcgcgtgcgagcacagccg 364 |||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||| Sbjct: 101366 ccgccggaactcgtgccgccgcgtctcccgccgcccgcaccgcgcgtgcgagcacagccg 101307 Query: 365 caggcccccgccgtcgtc 382 |||| || ||||| |||| Sbjct: 101306 caggtcctcgccgccgtc 101289
>gb|AC136378.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0047D03, complete sequence Length = 126165 Score = 163 bits (82), Expect = 7e-37 Identities = 124/138 (89%) Strand = Plus / Minus Query: 245 cttccagtgcagcgcctggcacgcgcgcgagcagtagttcaccacgccgcacacggagca 304 |||||||| ||||||||||||||||||||||||||| | | |||||||||| ||||| Sbjct: 18812 cttccagtcgagcgcctggcacgcgcgcgagcagtagctggcggcgccgcacaccgagca 18753 Query: 305 ccgccggaactcgtgccgccgcgtctccggccgaccgcacagcgcgtgcgagcacagccg 364 |||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||| Sbjct: 18752 ccgccggaactcgtgccgccgcgtctcccgccgcccgcaccgcgcgtgcgagcacagccg 18693 Query: 365 caggcccccgccgtcgtc 382 |||| || ||||| |||| Sbjct: 18692 caggtcctcgccgccgtc 18675
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 163 bits (82), Expect = 7e-37 Identities = 124/138 (89%) Strand = Plus / Minus Query: 245 cttccagtgcagcgcctggcacgcgcgcgagcagtagttcaccacgccgcacacggagca 304 |||||||| ||||||||||||||||||||||||||| | | |||||||||| ||||| Sbjct: 16731522 cttccagtcgagcgcctggcacgcgcgcgagcagtagctggcggcgccgcacaccgagca 16731463 Query: 305 ccgccggaactcgtgccgccgcgtctccggccgaccgcacagcgcgtgcgagcacagccg 364 |||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||| Sbjct: 16731462 ccgccggaactcgtgccgccgcgtctcccgccgcccgcaccgcgcgtgcgagcacagccg 16731403 Query: 365 caggcccccgccgtcgtc 382 |||| || ||||| |||| Sbjct: 16731402 caggtcctcgccgccgtc 16731385
>ref|XM_465888.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1140 Score = 149 bits (75), Expect = 1e-32 Identities = 102/111 (91%) Strand = Plus / Minus Query: 233 cttgtgcgccatcttccagtgcagcgcctggcacgcgcgcgagcagtagttcaccacgcc 292 ||||||||||| ||||||||||| ||||||||||||||| ||||||||| ||||| ||| Sbjct: 1035 cttgtgcgccaccttccagtgcatcgcctggcacgcgcgggagcagtagatcaccccgct 976 Query: 293 gcacacggagcaccgccggaactcgtgccgccgcgtctccggccgaccgca 343 |||||||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 975 gcacacggagcaccgccggaactcgtgcttccgcgtctccggccgcccgca 925
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 149 bits (75), Expect = 1e-32 Identities = 102/111 (91%) Strand = Plus / Plus Query: 233 cttgtgcgccatcttccagtgcagcgcctggcacgcgcgcgagcagtagttcaccacgcc 292 ||||||||||| ||||||||||| ||||||||||||||| ||||||||| ||||| ||| Sbjct: 18125609 cttgtgcgccaccttccagtgcatcgcctggcacgcgcgggagcagtagatcaccccgct 18125668 Query: 293 gcacacggagcaccgccggaactcgtgccgccgcgtctccggccgaccgca 343 |||||||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 18125669 gcacacggagcaccgccggaactcgtgcttccgcgtctccggccgcccgca 18125719 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 474 gcctcgccggccgcggcgaccgcggcg 500 ||||||||||||||||| ||||||||| Sbjct: 25027252 gcctcgccggccgcggccaccgcggcg 25027278 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 474 gcctcgccggccgcggcgaccgcggcg 500 ||||||||||||||||| ||||||||| Sbjct: 25013538 gcctcgccggccgcggccaccgcggcg 25013564
>dbj|AP005066.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0047E05 Length = 184323 Score = 149 bits (75), Expect = 1e-32 Identities = 102/111 (91%) Strand = Plus / Plus Query: 233 cttgtgcgccatcttccagtgcagcgcctggcacgcgcgcgagcagtagttcaccacgcc 292 ||||||||||| ||||||||||| ||||||||||||||| ||||||||| ||||| ||| Sbjct: 49010 cttgtgcgccaccttccagtgcatcgcctggcacgcgcgggagcagtagatcaccccgct 49069 Query: 293 gcacacggagcaccgccggaactcgtgccgccgcgtctccggccgaccgca 343 |||||||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 49070 gcacacggagcaccgccggaactcgtgcttccgcgtctccggccgcccgca 49120
>dbj|AP003707.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1485_B09 Length = 66599 Score = 135 bits (68), Expect = 2e-28 Identities = 134/156 (85%) Strand = Plus / Plus Query: 203 gagccaccggtccatgggcgtgcactcggccttgtgcgccatcttccagtgcagcgcctg 262 ||||||||||||||||||| ||||| ||||||||||| |||||||| ||||||||| Sbjct: 49261 gagccaccggtccatgggcacgcactgcgccttgtgcgcgcgcttccagtccagcgcctg 49320 Query: 263 gcacgcgcgcgagcagtagttcaccacgccgcacacggagcaccgccggaactcgtgccg 322 ||||||||| ||||||||||| || ||||||| ||||||||||||||||||||||| || Sbjct: 49321 gcacgcgcgggagcagtagttggccgcgccgcagacggagcaccgccggaactcgtggcg 49380 Query: 323 ccgcgtctccggccgaccgcacagcgcgtgcgagca 358 || |||||| ||| |||||| || |||| ||||| Sbjct: 49381 gcgggtctccctccggccgcaccgcacgtgggagca 49416
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 135 bits (68), Expect = 2e-28 Identities = 134/156 (85%) Strand = Plus / Plus Query: 203 gagccaccggtccatgggcgtgcactcggccttgtgcgccatcttccagtgcagcgcctg 262 ||||||||||||||||||| ||||| ||||||||||| |||||||| ||||||||| Sbjct: 40250309 gagccaccggtccatgggcacgcactgcgccttgtgcgcgcgcttccagtccagcgcctg 40250368 Query: 263 gcacgcgcgcgagcagtagttcaccacgccgcacacggagcaccgccggaactcgtgccg 322 ||||||||| ||||||||||| || ||||||| ||||||||||||||||||||||| || Sbjct: 40250369 gcacgcgcgggagcagtagttggccgcgccgcagacggagcaccgccggaactcgtggcg 40250428 Query: 323 ccgcgtctccggccgaccgcacagcgcgtgcgagca 358 || |||||| ||| |||||| || |||| ||||| Sbjct: 40250429 gcgggtctccctccggccgcaccgcacgtgggagca 40250464 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 cggccgcggcgaccgcggcg 500 |||||||||||||||||||| Sbjct: 10507466 cggccgcggcgaccgcggcg 10507447
>dbj|AP006843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1793G04 Length = 156714 Score = 135 bits (68), Expect = 2e-28 Identities = 134/156 (85%) Strand = Plus / Plus Query: 203 gagccaccggtccatgggcgtgcactcggccttgtgcgccatcttccagtgcagcgcctg 262 ||||||||||||||||||| ||||| ||||||||||| |||||||| ||||||||| Sbjct: 116087 gagccaccggtccatgggcacgcactgcgccttgtgcgcgcgcttccagtccagcgcctg 116146 Query: 263 gcacgcgcgcgagcagtagttcaccacgccgcacacggagcaccgccggaactcgtgccg 322 ||||||||| ||||||||||| || ||||||| ||||||||||||||||||||||| || Sbjct: 116147 gcacgcgcgggagcagtagttggccgcgccgcagacggagcaccgccggaactcgtggcg 116206 Query: 323 ccgcgtctccggccgaccgcacagcgcgtgcgagca 358 || |||||| ||| |||||| || |||| ||||| Sbjct: 116207 gcgggtctccctccggccgcaccgcacgtgggagca 116242
>dbj|AP006165.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1425D05, complete sequence Length = 66450 Score = 135 bits (68), Expect = 2e-28 Identities = 134/156 (85%) Strand = Plus / Plus Query: 203 gagccaccggtccatgggcgtgcactcggccttgtgcgccatcttccagtgcagcgcctg 262 ||||||||||||||||||| ||||| ||||||||||| |||||||| ||||||||| Sbjct: 41659 gagccaccggtccatgggcacgcactgcgccttgtgcgcgcgcttccagtccagcgcctg 41718 Query: 263 gcacgcgcgcgagcagtagttcaccacgccgcacacggagcaccgccggaactcgtgccg 322 ||||||||| ||||||||||| || ||||||| ||||||||||||||||||||||| || Sbjct: 41719 gcacgcgcgggagcagtagttggccgcgccgcagacggagcaccgccggaactcgtggcg 41778 Query: 323 ccgcgtctccggccgaccgcacagcgcgtgcgagca 358 || |||||| ||| |||||| || |||| ||||| Sbjct: 41779 gcgggtctccctccggccgcaccgcacgtgggagca 41814
>ref|XM_466846.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2142 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 474 gcctcgccggccgcggcgaccgcggcg 500 ||||||||||||||||| ||||||||| Sbjct: 227 gcctcgccggccgcggccaccgcggcg 201
>ref|XM_466849.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2407 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 474 gcctcgccggccgcggcgaccgcggcg 500 ||||||||||||||||| ||||||||| Sbjct: 262 gcctcgccggccgcggccaccgcggcg 236
>gb|BT016397.1| Zea mays clone Contig230 mRNA sequence Length = 1387 Score = 46.1 bits (23), Expect = 0.11 Identities = 83/103 (80%) Strand = Plus / Minus Query: 241 ccatcttccagtgcagcgcctggcacgcgcgcgagcagtagttcaccacgccgcacacgg 300 ||||| |||||||||||| |||||| | ||| ||||||||| | | | |||||| |||| Sbjct: 1000 ccatcctccagtgcagcgactggcaggagcgggagcagtagcgcgcgatgccgcagacgg 941 Query: 301 agcaccgccggaactcgtgccgccgcgtctccggccgaccgca 343 ||| || ||| ||||| | | |||||||||||| || ||||| Sbjct: 940 ggcagcggcggtactcgaggccccgcgtctccgggcggccgca 898
>emb|CT010521.4| M.truncatula DNA sequence from clone MTH2-34D24 on chromosome 3, complete sequence Length = 104085 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 303 caccgccggaactcgtgccgccgcgtctccg 333 |||||||||||||| ||| |||||||||||| Sbjct: 78806 caccgccggaactcatgcggccgcgtctccg 78776
>gb|AC144342.26| Medicago truncatula clone mth2-10n2, complete sequence Length = 145497 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 303 caccgccggaactcgtgccgccgcgtctccg 333 |||||||||||||| ||| |||||||||||| Sbjct: 9026 caccgccggaactcatgcggccgcgtctccg 8996
>dbj|AP005000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0042D01 Length = 148305 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 474 gcctcgccggccgcggcgaccgcggcg 500 ||||||||||||||||| ||||||||| Sbjct: 40240 gcctcgccggccgcggccaccgcggcg 40266 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 474 gcctcgccggccgcggcgaccgcggcg 500 ||||||||||||||||| ||||||||| Sbjct: 26526 gcctcgccggccgcggccaccgcggcg 26552
>dbj|AK068993.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001A06, full insert sequence Length = 2406 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 474 gcctcgccggccgcggcgaccgcggcg 500 ||||||||||||||||| ||||||||| Sbjct: 261 gcctcgccggccgcggccaccgcggcg 235
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 475 cctcgccggccgcggcgaccgcggcg 500 ||||||||||||||||| |||||||| Sbjct: 11889155 cctcgccggccgcggcggccgcggcg 11889180
>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1001_G09 Length = 118018 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 475 cctcgccggccgcggcgaccgcggcg 500 ||||||||||||||||| |||||||| Sbjct: 70645 cctcgccggccgcggcggccgcggcg 70670
>ref|XM_480435.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3294 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 464 ggcggcatgcgcctcgccggc 484 ||||||||||||||||||||| Sbjct: 447 ggcggcatgcgcctcgccggc 427
>emb|CR667931.1|CNS0FECH Tetraodon nigroviridis full-length cDNA Length = 1245 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 gggttggggttagcgttggcg 197 ||||||||||||||||||||| Sbjct: 797 gggttggggttagcgttggcg 777
>emb|CR665073.2|CNS0FC53 Tetraodon nigroviridis full-length cDNA Length = 1646 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 gggttggggttagcgttggcg 197 ||||||||||||||||||||| Sbjct: 1199 gggttggggttagcgttggcg 1179
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 480 ccggccgcggcgaccgcggcg 500 ||||||||||||||||||||| Sbjct: 2186742 ccggccgcggcgaccgcggcg 2186762
>gb|AC027796.9| Homo sapiens chromosome 17, clone RP11-235E17, complete sequence Length = 127431 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 249 cagtgcagcgcctggcacgcg 269 ||||||||||||||||||||| Sbjct: 108689 cagtgcagcgcctggcacgcg 108709
>dbj|AK011956.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610301H18 product:hypothetical protein, full insert sequence Length = 2511 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 472 gcgcctcgccggccgcggcgaccgc 496 ||||||| ||||||||||||||||| Sbjct: 93 gcgcctccccggccgcggcgaccgc 117
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 464 ggcggcatgcgcctcgccggc 484 ||||||||||||||||||||| Sbjct: 5103473 ggcggcatgcgcctcgccggc 5103453
>dbj|AP004568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0547A06 Length = 150922 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 464 ggcggcatgcgcctcgccggc 484 ||||||||||||||||||||| Sbjct: 141030 ggcggcatgcgcctcgccggc 141010
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 477 tcgccggccgcggcgaccgcg 497 ||||||||||||||||||||| Sbjct: 4659581 tcgccggccgcggcgaccgcg 4659561
>dbj|AP004656.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0020B10 Length = 136175 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 464 ggcggcatgcgcctcgccggc 484 ||||||||||||||||||||| Sbjct: 53237 ggcggcatgcgcctcgccggc 53217
>dbj|AK120496.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120I03, full insert sequence Length = 3280 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 464 ggcggcatgcgcctcgccggc 484 ||||||||||||||||||||| Sbjct: 447 ggcggcatgcgcctcgccggc 427
>gb|AY108193.1| Zea mays PCO082877 mRNA sequence Length = 485 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 241 ccatcttccagtgcagcgcctggcacgcgcgcgagcagtag 281 ||||| |||||||||||| |||||| | ||| ||||||||| Sbjct: 56 ccatcctccagtgcagcgactggcaggagcgggagcagtag 16
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 289 cgccgcacacggagcaccgccggaa 313 |||||||||||| |||||||||||| Sbjct: 924583 cgccgcacacggcgcaccgccggaa 924607
>ref|NM_183597.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1431 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 cggccgcggcgaccgcggcg 500 |||||||||||||||||||| Sbjct: 325 cggccgcggcgaccgcggcg 306
>ref|XM_479274.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1023 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 cggccgcggcgaccgcggcg 500 |||||||||||||||||||| Sbjct: 186 cggccgcggcgaccgcggcg 205
>ref|XM_364592.1| Magnaporthe grisea 70-15 hypothetical protein (MG09334.4) partial mRNA Length = 777 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 cgttggcgccgtcgagccac 209 |||||||||||||||||||| Sbjct: 640 cgttggcgccgtcgagccac 621
>gb|BC007992.2| Homo sapiens mitogen-activated protein kinase 7, transcript variant 2, mRNA (cDNA clone MGC:3875 IMAGE:3009873), complete cds Length = 2737 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 tggggttggggttagcgttggcgc 198 ||||||||||||| |||||||||| Sbjct: 1748 tggggttggggttggcgttggcgc 1725
>gb|BC030134.1| Homo sapiens mitogen-activated protein kinase 7, transcript variant 4, mRNA (cDNA clone MGC:19581 IMAGE:4111084), complete cds Length = 2819 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 tggggttggggttagcgttggcgc 198 ||||||||||||| |||||||||| Sbjct: 1819 tggggttggggttggcgttggcgc 1796
>gb|BC007404.2| Homo sapiens mitogen-activated protein kinase 7, transcript variant 2, mRNA (cDNA clone MGC:2148 IMAGE:3009873), complete cds Length = 2737 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 tggggttggggttagcgttggcgc 198 ||||||||||||| |||||||||| Sbjct: 1748 tggggttggggttggcgttggcgc 1725
>gb|AC004448.4| Homo sapiens chromosome 17, clone CTB-187M2, complete sequence Length = 149157 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 175 tggggttggggttagcgttggcgc 198 ||||||||||||| |||||||||| Sbjct: 134794 tggggttggggttggcgttggcgc 134817
>gb|AC124066.6| Homo sapiens chromosome 17, clone RP11-135L13, complete sequence Length = 160380 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 175 tggggttggggttagcgttggcgc 198 ||||||||||||| |||||||||| Sbjct: 14681 tggggttggggttggcgttggcgc 14704
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 cggccacggcgacggcattg 176 |||||||||||||||||||| Sbjct: 4276417 cggccacggcgacggcattg 4276436
>gb|BT008149.1| Synthetic construct Homo sapiens mitogen-activated protein kinase 7 mRNA, partial cds Length = 2034 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 tggggttggggttagcgttggcgc 198 ||||||||||||| |||||||||| Sbjct: 1380 tggggttggggttggcgttggcgc 1357
>emb|AL954167.4| Mouse DNA sequence from clone RP23-300M3 on chromosome 11 Contains a zinc finger protein pseudogene, complete sequence Length = 190351 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 ggcattggggttggggttag 189 |||||||||||||||||||| Sbjct: 13725 ggcattggggttggggttag 13744
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 gcgcctcgccggccgcggcg 491 |||||||||||||||||||| Sbjct: 2005745 gcgcctcgccggccgcggcg 2005726 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 cggccgcggcgaccgcggcg 500 |||||||||||||||||||| Sbjct: 1560195 cggccgcggcgaccgcggcg 1560176
>emb|CR604533.1| full-length cDNA clone CS0DF021YJ14 of Fetal brain of Homo sapiens (human) Length = 1963 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 tggggttggggttagcgttggcgc 198 ||||||||||||| |||||||||| Sbjct: 1034 tggggttggggttggcgttggcgc 1011
>emb|CR592256.1| full-length cDNA clone CS0DC002YL01 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1408 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 tggggttggggttagcgttggcgc 198 ||||||||||||| |||||||||| Sbjct: 453 tggggttggggttggcgttggcgc 430
>ref|NM_079138.1| Drosophila melanogaster gooseberry-neuro CG2692-RA (gsb-n), mRNA Length = 2234 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 agttcaccacgccgcacacg 299 |||||||||||||||||||| Sbjct: 1219 agttcaccacgccgcacacg 1238
>gb|AY071593.1| Drosophila melanogaster RE64348 full length cDNA Length = 2250 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 agttcaccacgccgcacacg 299 |||||||||||||||||||| Sbjct: 1220 agttcaccacgccgcacacg 1239
>gb|AC078893.10| Oryza sativa chromosome 10 BAC OSJNBb0044B19 genomic sequence, complete sequence Length = 81784 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 cggccgcggcgaccgcggcg 500 |||||||||||||||||||| Sbjct: 73641 cggccgcggcgaccgcggcg 73660
>gb|AC078948.11| Oryza sativa chromosome 10 BAC OSJNBa0001K12 genomic sequence, complete sequence Length = 144724 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 cggccgcggcgaccgcggcg 500 |||||||||||||||||||| Sbjct: 18377 cggccgcggcgaccgcggcg 18396
>gb|AC007582.7| Drosophila melanogaster, chromosome 2R, region 60F-60F, BAC clone BACR17E16, complete sequence Length = 180162 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 agttcaccacgccgcacacg 299 |||||||||||||||||||| Sbjct: 151140 agttcaccacgccgcacacg 151159
>gb|AY335567.1| Synthetic construct Homo sapiens mitogen-activated protein kinase 7 (MAPK7) mRNA, partial cds Length = 2034 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 tggggttggggttagcgttggcgc 198 ||||||||||||| |||||||||| Sbjct: 1380 tggggttggggttggcgttggcgc 1357
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 cggccgcggcgaccgcggcg 500 |||||||||||||||||||| Sbjct: 17173959 cggccgcggcgaccgcggcg 17173940
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 cggccgcggcgaccgcggcg 500 |||||||||||||||||||| Sbjct: 26504569 cggccgcggcgaccgcggcg 26504550
>dbj|AP002482.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0706B05 Length = 187835 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 cggccgcggcgaccgcggcg 500 |||||||||||||||||||| Sbjct: 2089 cggccgcggcgaccgcggcg 2070
>dbj|AP002480.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0469E05 Length = 160769 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 cggccgcggcgaccgcggcg 500 |||||||||||||||||||| Sbjct: 152426 cggccgcggcgaccgcggcg 152407
>ref|NM_139032.1| Homo sapiens mitogen-activated protein kinase 7 (MAPK7), transcript variant 2, mRNA Length = 2737 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 tggggttggggttagcgttggcgc 198 ||||||||||||| |||||||||| Sbjct: 1748 tggggttggggttggcgttggcgc 1725
>ref|NM_139033.1| Homo sapiens mitogen-activated protein kinase 7 (MAPK7), transcript variant 1, mRNA Length = 3113 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 tggggttggggttagcgttggcgc 198 ||||||||||||| |||||||||| Sbjct: 2151 tggggttggggttggcgttggcgc 2128
>ref|NM_002749.2| Homo sapiens mitogen-activated protein kinase 7 (MAPK7), transcript variant 3, mRNA Length = 2918 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 tggggttggggttagcgttggcgc 198 ||||||||||||| |||||||||| Sbjct: 1939 tggggttggggttggcgttggcgc 1916
>ref|NM_139034.1| Homo sapiens mitogen-activated protein kinase 7 (MAPK7), transcript variant 4, mRNA Length = 2813 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 tggggttggggttagcgttggcgc 198 ||||||||||||| |||||||||| Sbjct: 1851 tggggttggggttggcgttggcgc 1828
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 cggccgcggcgaccgcggcg 500 |||||||||||||||||||| Sbjct: 713815 cggccgcggcgaccgcggcg 713796
>dbj|AP005292.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1340_C08 Length = 192167 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 cggccgcggcgaccgcggcg 500 |||||||||||||||||||| Sbjct: 49840 cggccgcggcgaccgcggcg 49821
>gb|AY892292.1| Synthetic construct Homo sapiens clone FLH014955.01L mitogen-activated protein kinase 7 (MAPK7) mRNA, partial cds Length = 2034 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 tggggttggggttagcgttggcgc 198 ||||||||||||| |||||||||| Sbjct: 1380 tggggttggggttggcgttggcgc 1357
>gb|AY892291.1| Synthetic construct Homo sapiens clone FLH014954.01L mitogen-activated protein kinase 7 (MAPK7) mRNA, partial cds Length = 2034 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 tggggttggggttagcgttggcgc 198 ||||||||||||| |||||||||| Sbjct: 1380 tggggttggggttggcgttggcgc 1357
>gb|BC009963.2| Homo sapiens mitogen-activated protein kinase 7, transcript variant 3, mRNA (cDNA clone MGC:15371 IMAGE:4300124), complete cds Length = 2883 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 tggggttggggttagcgttggcgc 198 ||||||||||||| |||||||||| Sbjct: 1904 tggggttggggttggcgttggcgc 1881
>tpe|BN000634.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx105 gene for class III peroxidase 105 precursor, exon 1 Length = 1023 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 cggccgcggcgaccgcggcg 500 |||||||||||||||||||| Sbjct: 186 cggccgcggcgaccgcggcg 205
>gb|AE003466.2| Drosophila melanogaster chromosome 2R, section 73 of 73 of the complete sequence Length = 228008 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 agttcaccacgccgcacacg 299 |||||||||||||||||||| Sbjct: 10334 agttcaccacgccgcacacg 10315
>gb|AY534741.1| Homo sapiens mitogen activated protein kinase 7 transcript variant 5 mRNA, complete cds Length = 2885 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 tggggttggggttagcgttggcgc 198 ||||||||||||| |||||||||| Sbjct: 1904 tggggttggggttggcgttggcgc 1881
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 169 cggcattggggttggggttagcgttggcgccg 200 ||||||||| ||||| ||| |||||||||||| Sbjct: 3468723 cggcattggcgttggcgttggcgttggcgccg 3468754
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 atgggcgtgcactcggcctt 235 |||||||||||||||||||| Sbjct: 2223890 atgggcgtgcactcggcctt 2223871
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 cggccgcggcgaccgcggcg 500 |||||||||||||||||||| Sbjct: 17182999 cggccgcggcgaccgcggcg 17182980
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 458 ccggttggcggcatgcgcctcgccggcc 485 ||||||| |||||| ||||||||||||| Sbjct: 271136 ccggttgacggcatccgcctcgccggcc 271109
>dbj|AB209611.1| Homo sapiens mRNA for Mitogen activated protein kinase 7 transcript variant 5 variant protein Length = 4533 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 tggggttggggttagcgttggcgc 198 ||||||||||||| |||||||||| Sbjct: 3572 tggggttggggttggcgttggcgc 3549
>gb|U31277.1|AMU31277 Amycolatopsis methanolica pyrophosphate-dependent phosphofructokinase (pfp) gene, complete cds, DAHP synthase (aroA) and chitinase (chiA) genes, partial cds Length = 2302 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 473 cgcctcgccggccgcggcgaccgcggcg 500 |||| ||||| ||||||||||||||||| Sbjct: 2020 cgccgcgccgcccgcggcgaccgcggcg 2047
>gb|U29727.1|HSU29727 Human BMK1 gamma kinase mRNA, complete cds Length = 2848 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 tggggttggggttagcgttggcgc 198 ||||||||||||| |||||||||| Sbjct: 1886 tggggttggggttggcgttggcgc 1863
>gb|U29726.1|HSU29726 Human BMK1 beta kinase mRNA, complete cds Length = 2813 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 tggggttggggttagcgttggcgc 198 ||||||||||||| |||||||||| Sbjct: 1851 tggggttggggttggcgttggcgc 1828
>gb|U29725.1|HSU29725 Human BMK1 alpha kinase mRNA, complete cds Length = 2980 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 tggggttggggttagcgttggcgc 198 ||||||||||||| |||||||||| Sbjct: 2018 tggggttggggttggcgttggcgc 1995
>gb|U25278.1|HSU25278 Human ERK5 mRNA, complete cds Length = 2828 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 tggggttggggttagcgttggcgc 198 ||||||||||||| |||||||||| Sbjct: 1877 tggggttggggttggcgttggcgc 1854
>emb|AL160492.5|HS162E17 Homo sapiens chromosome 17 sequence from PAC RPCI-1 162E17 region D17S842-D17S953 map 17p11.2, complete sequence Length = 124940 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 tggggttggggttagcgttggcgc 198 ||||||||||||| |||||||||| Sbjct: 99266 tggggttggggttggcgttggcgc 99243 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,356,645 Number of Sequences: 3902068 Number of extensions: 2356645 Number of successful extensions: 49922 Number of sequences better than 10.0: 83 Number of HSP's better than 10.0 without gapping: 85 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 47895 Number of HSP's gapped (non-prelim): 2023 length of query: 500 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 478 effective length of database: 17,147,199,772 effective search space: 8196361491016 effective search space used: 8196361491016 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)