ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart26c04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GLGC_NITEU (Q82T88) Glucose-1-phosphate adenylyltransferase (EC ... 29 5.0

>GLGC_NITEU (Q82T88) Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)|
           (ADP-glucose synthase) (ADP-glucose pyrophosphorylase)
           (ADPGlc PPase)
          Length = 433

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 14/51 (27%), Positives = 23/51 (45%)
 Frame = +2

Query: 71  SWLKMILVFPWRGLPRGQNISSNPFRKKKHFKTRGKQVAWILMHLLATSIH 223
           ++LK ++V     +P G  +  NP   +KHF      +  I   +L   IH
Sbjct: 380 AYLKRVVVEKECQIPEGLKVGFNPDEDRKHFYVTDDGITLITPEMLGQGIH 430


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,852,151
Number of Sequences: 219361
Number of extensions: 952860
Number of successful extensions: 2073
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2073
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top