Clone Name | rbart26c04 |
---|---|
Clone Library Name | barley_pub |
>gb|AF099914.1| Caenorhabditis elegans cosmid C40A11, complete sequence Length = 29575 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Minus Query: 220 acatgcaaatgtaacttgaaatg 242 ||||||||||||||||||||||| Sbjct: 1140 acatgcaaatgtaacttgaaatg 1118
>gb|AC055845.15| Homo sapiens chromosome 11, clone RP11-682B13, complete sequence Length = 155304 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 95 ttcccttggcgaggtttacctagagg 120 ||||||||| |||||||||||||||| Sbjct: 143654 ttcccttggggaggtttacctagagg 143629
>gb|BC086300.1| Xenopus laevis cDNA clone IMAGE:3399754 Length = 1446 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 223 tgcaaatgtaacttgaaatggatc 246 ||||||||| |||||||||||||| Sbjct: 775 tgcaaatgttacttgaaatggatc 752
>emb|AL606686.3|OSJN00084 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070M12, complete sequence Length = 144670 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 268 aattaactagtgtggtcaaagatg 291 ||||||| |||||||||||||||| Sbjct: 29076 aattaacaagtgtggtcaaagatg 29053
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 268 aattaactagtgtggtcaaagatg 291 ||||||| |||||||||||||||| Sbjct: 35092573 aattaacaagtgtggtcaaagatg 35092550
>emb|AL732347.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0723C07, complete sequence Length = 112897 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 268 aattaactagtgtggtcaaagatg 291 ||||||| |||||||||||||||| Sbjct: 47662 aattaacaagtgtggtcaaagatg 47639
>emb|AL355835.3|CNS05TCP Human chromosome 14 DNA sequence BAC R-196N22 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 172374 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 aactagtgtggtcaaagatg 291 |||||||||||||||||||| Sbjct: 57911 aactagtgtggtcaaagatg 57930
>emb|AL161751.3|CNS01RHG Human chromosome 14 DNA sequence BAC R-96D24 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 184692 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 aactagtgtggtcaaagatg 291 |||||||||||||||||||| Sbjct: 94075 aactagtgtggtcaaagatg 94094 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,660,837 Number of Sequences: 3902068 Number of extensions: 2660837 Number of successful extensions: 49424 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 49411 Number of HSP's gapped (non-prelim): 13 length of query: 418 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 396 effective length of database: 17,147,199,772 effective search space: 6790291109712 effective search space used: 6790291109712 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)