ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart26c03 |
|---|---|
| Clone Library Name | barley_pub |
>SNAA_VITVI (P93798) Alpha-soluble NSF attachment protein (Alpha-SNAP)| (N-ethylmaleimide-sensitive factor attachment protein, alpha) Length = 289 Score = 125 bits (314), Expect = 7e-29 Identities = 60/89 (67%), Positives = 71/89 (79%) Frame = -1 Query: 519 ICQLCRADTVAIQNSXERYQEIDPTFSGTREYKLLADLAASMDDGDVAKFTDAIKEFDGM 340 ICQLC+ D VAI N+ +RYQE+DPTFSGTREYKLL DLAA++D+ DV KFTDA+KEFD M Sbjct: 201 ICQLCKGDVVAITNALDRYQEMDPTFSGTREYKLLVDLAAAVDEEDVVKFTDAVKEFDSM 260 Query: 339 TRLDPWKTTLLLRAKNELKKQXXXXXDLT 253 T+LD WKTTLLLR K +K + DLT Sbjct: 261 TQLDAWKTTLLLRVKEAIKAKELEEDDLT 289
>SNAA_SOLTU (Q9M5P8) Alpha-soluble NSF attachment protein (Alpha-SNAP)| (N-ethylmaleimide-sensitive factor attachment protein, alpha) Length = 288 Score = 122 bits (305), Expect = 8e-28 Identities = 59/89 (66%), Positives = 70/89 (78%) Frame = -1 Query: 519 ICQLCRADTVAIQNSXERYQEIDPTFSGTREYKLLADLAASMDDGDVAKFTDAIKEFDGM 340 ICQLC+ D V I N+ ERYQE+DPTFSGTRE KLL DLAA++D+ DVAKFTDA+KE+D M Sbjct: 200 ICQLCKGDVVPINNALERYQELDPTFSGTRECKLLVDLAAAIDEEDVAKFTDAVKEYDSM 259 Query: 339 TRLDPWKTTLLLRAKNELKKQXXXXXDLT 253 T+LD W+TTLLLR K LK + DLT Sbjct: 260 TQLDAWRTTLLLRVKETLKAKELEEDDLT 288
>SNAA2_ARATH (Q9SPE6) Alpha-soluble NSF attachment protein 2 (Alpha-SNAP2)| (N-ethylmaleimide-sensitive factor attachment protein, alpha 2) Length = 289 Score = 115 bits (288), Expect = 7e-26 Identities = 53/89 (59%), Positives = 70/89 (78%) Frame = -1 Query: 519 ICQLCRADTVAIQNSXERYQEIDPTFSGTREYKLLADLAASMDDGDVAKFTDAIKEFDGM 340 +C LC+AD V+I N+ E+YQ++DPTF+GTRE K LADLA+++D+ D+AKFTD +KEFD M Sbjct: 201 MCHLCKADVVSITNALEKYQDLDPTFTGTRECKFLADLASAIDEEDIAKFTDVVKEFDSM 260 Query: 339 TRLDPWKTTLLLRAKNELKKQXXXXXDLT 253 T LD WKTT+LLR K +LK + DLT Sbjct: 261 TPLDSWKTTMLLRVKEKLKAKELEEDDLT 289
>SNAA1_ARATH (Q9LXZ5) Alpha-soluble NSF attachment protein 1 (Alpha-SNAP1)| (N-ethylmaleimide-sensitive factor attachment protein, alpha 1) Length = 381 Score = 84.7 bits (208), Expect = 1e-16 Identities = 37/63 (58%), Positives = 51/63 (80%) Frame = -1 Query: 519 ICQLCRADTVAIQNSXERYQEIDPTFSGTREYKLLADLAASMDDGDVAKFTDAIKEFDGM 340 +C LC+AD V+I N+ E+YQ++DPTFSGTRE K LADLA+++D+ D+AKFTD KE D + Sbjct: 252 MCHLCKADVVSITNALEKYQDLDPTFSGTRECKFLADLASAIDEEDIAKFTDVSKEIDSV 311 Query: 339 TRL 331 + L Sbjct: 312 SPL 314
>SEC17_SCHPO (Q9P4X4) Probable vesicular-fusion protein sec17 homolog| Length = 289 Score = 73.9 bits (180), Expect = 2e-13 Identities = 30/80 (37%), Positives = 53/80 (66%) Frame = -1 Query: 519 ICQLCRADTVAIQNSXERYQEIDPTFSGTREYKLLADLAASMDDGDVAKFTDAIKEFDGM 340 +C + D +A + + E + EIDP+F+ TREY+LL DL +++ D F D + +D + Sbjct: 204 LCYMANGDEIATRRALEHFLEIDPSFASTREYQLLKDLQDTIEASDANMFADKVFTYDQL 263 Query: 339 TRLDPWKTTLLLRAKNELKK 280 ++LD WKTT+LL+ K+ +++ Sbjct: 264 SKLDSWKTTILLKIKSSIQE 283
>SEC17_NEUCR (Q9P6A5) Probable vesicular-fusion protein sec17 homolog| Length = 292 Score = 70.5 bits (171), Expect = 3e-12 Identities = 31/80 (38%), Positives = 48/80 (60%) Frame = -1 Query: 519 ICQLCRADTVAIQNSXERYQEIDPTFSGTREYKLLADLAASMDDGDVAKFTDAIKEFDGM 340 +C L D V Q + +Y E DP+F+G REY+LL DL + + ++ F D + +D M Sbjct: 207 LCSLATKDMVTAQRNITKYAEKDPSFTGQREYQLLVDLLEAASNNNLEMFQDKLAAYDKM 266 Query: 339 TRLDPWKTTLLLRAKNELKK 280 +RLD WK +LL+ KN ++ Sbjct: 267 SRLDDWKAAVLLQIKNNFEE 286
>SEC17_ASHGO (Q75D68) Vesicular-fusion protein SEC17| Length = 291 Score = 67.0 bits (162), Expect = 3e-11 Identities = 31/78 (39%), Positives = 49/78 (62%) Frame = -1 Query: 519 ICQLCRADTVAIQNSXERYQEIDPTFSGTREYKLLADLAASMDDGDVAKFTDAIKEFDGM 340 +C L +DTVA + + + + D +F G+RE+ LLA + + GDV F++ + EFD Sbjct: 206 LCFLAASDTVAAEKTLQEALQEDSSFHGSREHDLLAAIIEDVKQGDVEAFSNHVFEFDKF 265 Query: 339 TRLDPWKTTLLLRAKNEL 286 ++LD WKTT+LLR K + Sbjct: 266 SKLDKWKTTVLLRVKTSI 283
>SEC17_COPCI (P78603) Vesicular-fusion protein SEC17| Length = 285 Score = 65.1 bits (157), Expect = 1e-10 Identities = 32/78 (41%), Positives = 49/78 (62%) Frame = -1 Query: 510 LCRADTVAIQNSXERYQEIDPTFSGTREYKLLADLAASMDDGDVAKFTDAIKEFDGMTRL 331 LC D V + + ++Y D TF GTRE+K L ++D GDV +T A+ EFD +T+L Sbjct: 205 LC-TDIVTARRNAQKYIGQDNTFVGTREFKFADALMEAVDAGDVGAYTAAVVEFDRITKL 263 Query: 330 DPWKTTLLLRAKNELKKQ 277 D WKT +LL+ K ++++ Sbjct: 264 DNWKTAILLKIKRGIQEE 281
>SNAA_MOUSE (Q9DB05) Alpha-soluble NSF attachment protein (SNAP-alpha)| (N-ethylmaleimide-sensitive factor attachment protein, alpha) Length = 295 Score = 65.1 bits (157), Expect = 1e-10 Identities = 29/79 (36%), Positives = 52/79 (65%) Frame = -1 Query: 519 ICQLCRADTVAIQNSXERYQEIDPTFSGTREYKLLADLAASMDDGDVAKFTDAIKEFDGM 340 +C C D + + + ++Y+E+ P FS +RE KL+ L + ++ +V +T+A+KE+D + Sbjct: 211 LCHFC-IDMLNAKLAVQKYEELFPAFSDSRECKLMKKLLEAHEEQNVDSYTEAVKEYDSI 269 Query: 339 TRLDPWKTTLLLRAKNELK 283 +RLD W TT+LLR K ++ Sbjct: 270 SRLDQWLTTMLLRIKKTIQ 288
>SNAA_RAT (P54921) Alpha-soluble NSF attachment protein (SNAP-alpha)| (N-ethylmaleimide-sensitive factor attachment protein, alpha) Length = 295 Score = 63.9 bits (154), Expect = 2e-10 Identities = 28/79 (35%), Positives = 52/79 (65%) Frame = -1 Query: 519 ICQLCRADTVAIQNSXERYQEIDPTFSGTREYKLLADLAASMDDGDVAKFTDAIKEFDGM 340 +C C D + + + ++Y+E+ P FS +RE KL+ L + ++ +V +T+++KE+D + Sbjct: 211 LCHFC-IDMLNAKLAVQKYEELFPAFSDSRECKLMKKLLEAHEEQNVDSYTESVKEYDSI 269 Query: 339 TRLDPWKTTLLLRAKNELK 283 +RLD W TT+LLR K ++ Sbjct: 270 SRLDQWLTTMLLRIKKTIQ 288
>SNAA_HUMAN (P54920) Alpha-soluble NSF attachment protein (SNAP-alpha)| (N-ethylmaleimide-sensitive factor attachment protein, alpha) Length = 295 Score = 63.9 bits (154), Expect = 2e-10 Identities = 28/79 (35%), Positives = 52/79 (65%) Frame = -1 Query: 519 ICQLCRADTVAIQNSXERYQEIDPTFSGTREYKLLADLAASMDDGDVAKFTDAIKEFDGM 340 +C C D + + + ++Y+E+ P FS +RE KL+ L + ++ +V +T+++KE+D + Sbjct: 211 LCHFC-IDMLNAKLAVQKYEELFPAFSDSRECKLMKKLLEAHEEQNVDSYTESVKEYDSI 269 Query: 339 TRLDPWKTTLLLRAKNELK 283 +RLD W TT+LLR K ++ Sbjct: 270 SRLDQWLTTMLLRIKKTIQ 288
>SNAP_DROME (Q23983) Soluble NSF attachment protein (SNAP)| (N-ethylmaleimide-sensitive factor attachment protein) Length = 292 Score = 63.2 bits (152), Expect = 4e-10 Identities = 28/75 (37%), Positives = 50/75 (66%) Frame = -1 Query: 519 ICQLCRADTVAIQNSXERYQEIDPTFSGTREYKLLADLAASMDDGDVAKFTDAIKEFDGM 340 +C L D + Q++ E+Y + P F +RE+KL+ L ++++ ++ FT+A+K++D + Sbjct: 209 LCHLS-VDLLNAQHAIEKYAQQYPAFQDSREFKLIKVLCENLEEQNIEGFTEAVKDYDSI 267 Query: 339 TRLDPWKTTLLLRAK 295 +RLD W TT+LLR K Sbjct: 268 SRLDQWYTTILLRIK 282
>SEC17_YEAST (P32602) Alpha-soluble NSF attachment protein (SNAP-alpha)| (N-ethylmaleimide-sensitive factor attachment protein, alpha) (Vesicular-fusion protein SEC17) (alpha-SNAP chaperone) Length = 291 Score = 63.2 bits (152), Expect = 4e-10 Identities = 29/81 (35%), Positives = 46/81 (56%) Frame = -1 Query: 519 ICQLCRADTVAIQNSXERYQEIDPTFSGTREYKLLADLAASMDDGDVAKFTDAIKEFDGM 340 +CQL D VA + + Q DP F+ +RE L L ++++GD + ++ KEFD Sbjct: 206 LCQLAATDAVAAARTLQEGQSEDPNFADSRESNFLKSLIDAVNEGDSEQLSEHCKEFDNF 265 Query: 339 TRLDPWKTTLLLRAKNELKKQ 277 RLD WK T+L + K +++Q Sbjct: 266 MRLDKWKITILNKIKESIQQQ 286
>SNAA_BOVIN (P81125) Alpha-soluble NSF attachment protein (SNAP-alpha)| (N-ethylmaleimide-sensitive factor attachment protein, alpha) Length = 295 Score = 62.8 bits (151), Expect = 6e-10 Identities = 28/79 (35%), Positives = 51/79 (64%) Frame = -1 Query: 519 ICQLCRADTVAIQNSXERYQEIDPTFSGTREYKLLADLAASMDDGDVAKFTDAIKEFDGM 340 +C C D + + + ++Y+E+ P FS +RE K + L + ++ +V +T+A+KE+D + Sbjct: 211 LCHFC-IDMLNAKLAVQKYEELFPAFSDSRECKRIKKLLEAHEEQNVDSYTEAVKEYDSI 269 Query: 339 TRLDPWKTTLLLRAKNELK 283 +RLD W TT+LLR K ++ Sbjct: 270 SRLDQWLTTMLLRIKKTIQ 288
>SNAB_MOUSE (P28663) Beta-soluble NSF attachment protein (SNAP-beta)| (N-ethylmaleimide-sensitive factor attachment protein, beta) (Brain protein I47) Length = 298 Score = 62.0 bits (149), Expect = 9e-10 Identities = 28/72 (38%), Positives = 48/72 (66%) Frame = -1 Query: 498 DTVAIQNSXERYQEIDPTFSGTREYKLLADLAASMDDGDVAKFTDAIKEFDGMTRLDPWK 319 D + + + E+Y+E+ P F+ +RE KLL L + ++ + +T+A+KEFD ++RLD W Sbjct: 217 DELNAKLALEKYEEMFPAFTDSRECKLLKKLLEAHEEQNSEAYTEAVKEFDSISRLDQWL 276 Query: 318 TTLLLRAKNELK 283 TT+LLR K ++ Sbjct: 277 TTMLLRIKKSIQ 288
>SNAB_HUMAN (Q9H115) Beta-soluble NSF attachment protein (SNAP-beta)| (N-ethylmaleimide-sensitive factor attachment protein, beta) Length = 298 Score = 62.0 bits (149), Expect = 9e-10 Identities = 28/72 (38%), Positives = 48/72 (66%) Frame = -1 Query: 498 DTVAIQNSXERYQEIDPTFSGTREYKLLADLAASMDDGDVAKFTDAIKEFDGMTRLDPWK 319 D + + + E+Y+E+ P F+ +RE KLL L + ++ + +T+A+KEFD ++RLD W Sbjct: 217 DELNAKLALEKYEEMFPAFTDSRECKLLKKLLEAHEEQNSEAYTEAVKEFDSISRLDQWL 276 Query: 318 TTLLLRAKNELK 283 TT+LLR K ++ Sbjct: 277 TTMLLRIKKSIQ 288
>SNAB_BOVIN (P81126) Beta-soluble NSF attachment protein (SNAP-beta)| (N-ethylmaleimide-sensitive factor attachment protein, beta) Length = 298 Score = 62.0 bits (149), Expect = 9e-10 Identities = 28/72 (38%), Positives = 48/72 (66%) Frame = -1 Query: 498 DTVAIQNSXERYQEIDPTFSGTREYKLLADLAASMDDGDVAKFTDAIKEFDGMTRLDPWK 319 D + + + E+Y+E+ P F+ +RE KLL L + ++ + +T+A+KEFD ++RLD W Sbjct: 217 DELNAKLALEKYEEMFPAFTDSRECKLLKKLLEAHEEQNSEAYTEAVKEFDSISRLDQWL 276 Query: 318 TTLLLRAKNELK 283 TT+LLR K ++ Sbjct: 277 TTMLLRIKKSIQ 288
>SEC17_PICPA (Q9P4D0) Vesicular-fusion protein SEC17| Length = 294 Score = 45.8 bits (107), Expect = 7e-05 Identities = 24/79 (30%), Positives = 39/79 (49%) Frame = -1 Query: 519 ICQLCRADTVAIQNSXERYQEIDPTFSGTREYKLLADLAASMDDGDVAKFTDAIKEFDGM 340 +C+L + ER+ DPTF TR Y+ L + +GD A E+D + Sbjct: 207 LCRLALNGYPSASALLERFVSWDPTFEKTRGYEFALKLVDGLKEGDPDIIASASHEYDQI 266 Query: 339 TRLDPWKTTLLLRAKNELK 283 +RLD +K +L + KN ++ Sbjct: 267 SRLDNFKVKILNKIKNNIR 285
>V011_FOWPV (Q9J5J0) Soluble NSF attachment protein homolog FPV011| Length = 278 Score = 42.4 bits (98), Expect = 8e-04 Identities = 21/72 (29%), Positives = 40/72 (55%) Frame = -1 Query: 519 ICQLCRADTVAIQNSXERYQEIDPTFSGTREYKLLADLAASMDDGDVAKFTDAIKEFDGM 340 +C LC +D + S ++Y++I P F +E K + + A+ + ++ FT AI+E+D Sbjct: 196 MCYLC-SDVSRAKRSLDKYKDIFPAFKDFKECKFIEKILAACETKNIETFTSAIEEYDHG 254 Query: 339 TRLDPWKTTLLL 304 +D ++LL Sbjct: 255 NTIDEALMSMLL 266
>V033_FOWPV (O90758) Soluble NSF attachment protein homolog FPV033| Length = 287 Score = 39.3 bits (90), Expect = 0.007 Identities = 21/63 (33%), Positives = 33/63 (52%) Frame = -1 Query: 465 YQEIDPTFSGTREYKLLADLAASMDDGDVAKFTDAIKEFDGMTRLDPWKTTLLLRAKNEL 286 Y E+ F REY L+ + S D ++ DA++E+ +TRLD T +LL K + Sbjct: 225 YTELYAQFIDYREYTLIMKVVESCDTCNLDILVDALREYGSVTRLDYILTIMLLEIKKNI 284 Query: 285 KKQ 277 + Q Sbjct: 285 QTQ 287
>DOPO_HUMAN (P09172) Dopamine beta-hydroxylase precursor (EC 1.14.17.1)| (Dopamine beta-monooxygenase) Length = 603 Score = 30.4 bits (67), Expect = 3.0 Identities = 16/40 (40%), Positives = 20/40 (50%) Frame = -1 Query: 414 ADLAASMDDGDVAKFTDAIKEFDGMTRLDPWKTTLLLRAK 295 ADL DGD A F DA + G LDP + LL+ + Sbjct: 84 ADLVVLWTDGDTAYFADAWSDQKGQIHLDPQQDYQLLQVQ 123 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,801,929 Number of Sequences: 219361 Number of extensions: 1309872 Number of successful extensions: 3207 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 3149 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3207 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3927707336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
