ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart26c02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ACOC_PSEPU (Q59695) Dihydrolipoyllysine-residue acetyltransferas... 40 0.003
2YTXM_BACSU (P23974) Putative esterase ytxM (EC 3.1.-.-) 38 0.011
3ACOC_RALEU (P27747) Dihydrolipoyllysine-residue acetyltransferas... 36 0.041
4DMPD_PSEUF (P19076) 2-hydroxymuconic semialdehyde hydrolase (EC ... 36 0.054
5MHPC_ECOLI (P77044) 2-hydroxy-6-ketonona-2,4-dienedioic acid hyd... 36 0.054
6PIP_THEAC (P96084) Proline iminopeptidase (EC 3.4.11.5) (PIP) (P... 34 0.16
7BPHD_BURCE (P47229) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hy... 33 0.35
8YG2V_YEAST (P53264) Hypothetical 52.0 kDa protein in CLB6-SHY1 i... 33 0.35
9ESL2_MYCGE (Q49418) Putative esterase/lipase 2 (EC 3.1.-.-) 33 0.45
10THCF_RHOER (O05691) Non-heme haloperoxidase (EC 1.11.1.-) 32 0.78
11ESL2_MYCPN (P75311) Putative esterase/lipase 2 (EC 3.1.-.-) 31 1.3
12ECM18_YEAST (Q04623) Extracellular matrix protein 18 30 2.3
13TODF_PSEPU (P23133) 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase ... 30 2.3
14OMPA_BUCAP (Q8K9L4) OmpA-like protein precursor 30 3.8
15PALH_EMENI (Q9P904) pH-response regulator protein palH/RIM21 29 5.0
16PRXC_PSEPY (P25026) Non-heme chloroperoxidase (EC 1.11.1.10) (Ch... 29 5.0
17LIP1_PSYIM (Q02104) Lipase 1 precursor (EC 3.1.1.3) (Triacylglyc... 29 6.6
18OSH7_YEAST (P38755) Oxysterol-binding protein homolog 7 28 8.6
19Y406_CAMJR (Q5HWB0) UPF0078 membrane protein CJE0406 28 8.6
20Y357_CAMJE (Q9PIE4) UPF0078 membrane protein Cj0357c 28 8.6
21LIP3_MORS1 (P24640) Lipase 3 precursor (EC 3.1.1.3) (Triacylglyc... 28 8.6

>ACOC_PSEPU (Q59695) Dihydrolipoyllysine-residue acetyltransferase component of|
           acetoin cleaving system (EC 2.3.1.12) (Acetoin
           dehydrogenase E2 component) (Dihydrolipoamide
           acetyltransferase component of acetoin cleaving system)
          Length = 370

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 20/55 (36%), Positives = 31/55 (56%)
 Frame = -3

Query: 370 LIVWGEFDQIFPVAKAHKVKEKLGEKAKLRIIPNTGHLPHQEDSKLFNQILLDFL 206
           L+VWG  D I P + A K     G +A++ ++P  GH+   E ++  NQ +L FL
Sbjct: 318 LVVWGGKDAIIPASHARK-----GPEAEVLVLPEAGHMVQMEAAEQVNQQMLAFL 367



to top

>YTXM_BACSU (P23974) Putative esterase ytxM (EC 3.1.-.-)|
          Length = 274

 Score = 38.1 bits (87), Expect = 0.011
 Identities = 18/56 (32%), Positives = 33/56 (58%)
 Frame = -3

Query: 373 VLIVWGEFDQIFPVAKAHKVKEKLGEKAKLRIIPNTGHLPHQEDSKLFNQILLDFL 206
           VL++ GE+D+ F     ++   K+   +++ I+P  GH  H E  +LF +I+ +FL
Sbjct: 218 VLLICGEWDEKF--CAINQEVHKMLPSSRIEIVPKAGHTVHVEQPRLFGKIVSEFL 271



to top

>ACOC_RALEU (P27747) Dihydrolipoyllysine-residue acetyltransferase component of|
           acetoin cleaving system (EC 2.3.1.12) (Acetoin
           dehydrogenase E2 component) (Dihydrolipoamide
           acetyltransferase component of acetoin cleaving system)
           (Fast-migrating protein) (
          Length = 373

 Score = 36.2 bits (82), Expect = 0.041
 Identities = 19/54 (35%), Positives = 28/54 (51%)
 Frame = -3

Query: 379 QEVLIVWGEFDQIFPVAKAHKVKEKLGEKAKLRIIPNTGHLPHQEDSKLFNQIL 218
           + VL+VWG  DQI P A A    E     A +++  + GH+   E +  FN +L
Sbjct: 318 KRVLVVWGGQDQIIPAAHA----EAAPPGATVKVFADAGHMSQMEKANDFNALL 367



to top

>DMPD_PSEUF (P19076) 2-hydroxymuconic semialdehyde hydrolase (EC 3.1.1.-)|
           (HMSH)
          Length = 283

 Score = 35.8 bits (81), Expect = 0.054
 Identities = 22/74 (29%), Positives = 37/74 (50%)
 Frame = -3

Query: 427 IKGIASGHGFEITPLPQEVLIVWGEFDQIFPVAKAHKVKEKLGEKAKLRIIPNTGHLPHQ 248
           + G+AS     I  LP E L++ G  DQI P+  +  + + +  +A+L +    GH    
Sbjct: 203 VDGLASAEA-AIRALPHETLVIHGREDQIIPLQTSLTLADWIA-RAQLHVFGQCGHWTQI 260

Query: 247 EDSKLFNQILLDFL 206
           E +  F  ++ DFL
Sbjct: 261 EHAARFASLVGDFL 274



to top

>MHPC_ECOLI (P77044) 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase (EC|
           3.7.1.-)
          Length = 293

 Score = 35.8 bits (81), Expect = 0.054
 Identities = 19/66 (28%), Positives = 34/66 (51%)
 Frame = -3

Query: 403 GFEITPLPQEVLIVWGEFDQIFPVAKAHKVKEKLGEKAKLRIIPNTGHLPHQEDSKLFNQ 224
           G  +  +  + LIVWG  D+  P+    ++   +   ++L I  + GH    E +  FNQ
Sbjct: 226 GPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGIAG-SELHIFRDCGHWAQWEHADAFNQ 284

Query: 223 ILLDFL 206
           ++L+FL
Sbjct: 285 LVLNFL 290



to top

>PIP_THEAC (P96084) Proline iminopeptidase (EC 3.4.11.5) (PIP) (Prolyl|
           aminopeptidase) (PAP) (Tricorn protease-interacting
           factor F1)
          Length = 293

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 20/65 (30%), Positives = 37/65 (56%)
 Frame = -3

Query: 397 EITPLPQEVLIVWGEFDQIFPVAKAHKVKEKLGEKAKLRIIPNTGHLPHQEDSKLFNQIL 218
           +I+ +    LI  GE+D++ P   A  + EK+   ++L +  +  HL   ED + +N++L
Sbjct: 228 KISAIKIPTLITVGEYDEVTPNV-ARVIHEKIAG-SELHVFRDCSHLTMWEDREGYNKLL 285

Query: 217 LDFLL 203
            DF+L
Sbjct: 286 SDFIL 290



to top

>BPHD_BURCE (P47229) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC|
           3.7.1.-)
          Length = 286

 Score = 33.1 bits (74), Expect = 0.35
 Identities = 16/57 (28%), Positives = 29/57 (50%)
 Frame = -3

Query: 376 EVLIVWGEFDQIFPVAKAHKVKEKLGEKAKLRIIPNTGHLPHQEDSKLFNQILLDFL 206
           +  I WG  D+  P+    K+   + + A+L +    GH    E +  FN++++DFL
Sbjct: 228 KTFITWGRDDRFVPLDHGLKLLWNIDD-ARLHVFSKCGHWAQWEHADEFNRLVIDFL 283



to top

>YG2V_YEAST (P53264) Hypothetical 52.0 kDa protein in CLB6-SHY1 intergenic|
           region
          Length = 445

 Score = 33.1 bits (74), Expect = 0.35
 Identities = 14/33 (42%), Positives = 24/33 (72%)
 Frame = -3

Query: 316 VKEKLGEKAKLRIIPNTGHLPHQEDSKLFNQIL 218
           +KEKL +K+ + I+P++GH  + ++ K FN IL
Sbjct: 406 LKEKLKQKSNVIIVPHSGHHLYLDNYKFFNNIL 438



to top

>ESL2_MYCGE (Q49418) Putative esterase/lipase 2 (EC 3.1.-.-)|
          Length = 268

 Score = 32.7 bits (73), Expect = 0.45
 Identities = 16/55 (29%), Positives = 25/55 (45%)
 Frame = -3

Query: 370 LIVWGEFDQIFPVAKAHKVKEKLGEKAKLRIIPNTGHLPHQEDSKLFNQILLDFL 206
           L++ G  D + P   +        +K   ++I   GH PH    KLF   +L+FL
Sbjct: 206 LVILGANDIVTPTKASVDYLANKSDKIIFKVIDGVGHSPHDSAPKLFFDYVLEFL 260



to top

>THCF_RHOER (O05691) Non-heme haloperoxidase (EC 1.11.1.-)|
          Length = 274

 Score = 32.0 bits (71), Expect = 0.78
 Identities = 17/55 (30%), Positives = 29/55 (52%)
 Frame = -3

Query: 370 LIVWGEFDQIFPVAKAHKVKEKLGEKAKLRIIPNTGHLPHQEDSKLFNQILLDFL 206
           LI+ G+ DQI P+A + +    L + A+L++ P   H     ++   N  LL F+
Sbjct: 218 LIMHGDDDQIVPIANSAETAVTLVKNARLKVYPGLSHGMCTVNADTVNADLLSFI 272



to top

>ESL2_MYCPN (P75311) Putative esterase/lipase 2 (EC 3.1.-.-)|
          Length = 268

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = -3

Query: 370 LIVWGEFDQIFPVAKAHKVKEKLGEKAKLRIIPNTGHLPHQEDSKLFNQILLDFL 206
           L+V G  D + P   + +   K  E    +II   GH PH    KLF   + +FL
Sbjct: 205 LVVLGSNDIVTPTKASVEYLAKHSETIIFKIIDGVGHSPHYYAPKLFFDYIGEFL 259



to top

>ECM18_YEAST (Q04623) Extracellular matrix protein 18|
          Length = 453

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
 Frame = -3

Query: 379 QEVLIVWGEFDQIFPVAKAHKVKEKLG-----EKAKLRIIPNTGHLPHQEDSKLFNQILL 215
           +++LIV+G++D +   A    VKE        E A    IP++GH    ++ + FNQ ++
Sbjct: 384 KKLLIVYGQYDWMNKKAGMFMVKELNNLKNCLEGASYLEIPSSGHNLFLDNPESFNQSIV 443

Query: 214 DFL 206
            FL
Sbjct: 444 SFL 446



to top

>TODF_PSEPU (P23133) 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase (EC 3.1.1.-)|
           (HOHH)
          Length = 276

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 16/64 (25%), Positives = 35/64 (54%)
 Frame = -3

Query: 397 EITPLPQEVLIVWGEFDQIFPVAKAHKVKEKLGEKAKLRIIPNTGHLPHQEDSKLFNQIL 218
           +I  +  E LI+ G  D++ P+  + ++ + + E ++L +    GH    E ++ F +++
Sbjct: 210 DIRDIRHETLILHGRDDRVIPLETSLRLNQLI-EPSQLHVFGRCGHWVQIEQNRGFIRLV 268

Query: 217 LDFL 206
            DFL
Sbjct: 269 NDFL 272



to top

>OMPA_BUCAP (Q8K9L4) OmpA-like protein precursor|
          Length = 347

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = +3

Query: 264 PVFGMILNFAFSPSFSFTLCALATGKIWSNSPHTI 368
           PVFG+ L + F+P FSF +    TG     SPH I
Sbjct: 64  PVFGLFLGYEFNPYFSFEIENDTTG----FSPHLI 94



to top

>PALH_EMENI (Q9P904) pH-response regulator protein palH/RIM21|
          Length = 760

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
 Frame = +3

Query: 45  SYRHMYVRPPPPLNYTTPNSRFD*SSIKTC---MHARNQSSSYLPAAMP-LEEEGGGS 206
           S +    RP PP    TP SR D +S  +    +H    SS   P AMP +EEE  GS
Sbjct: 442 SRKRRSARPTPPPAAVTPVSRADTTSAASTVYNVHYYPVSSPTPPVAMPFMEEEDEGS 499



to top

>PRXC_PSEPY (P25026) Non-heme chloroperoxidase (EC 1.11.1.10) (Chloride|
           peroxidase) (CPO-P) (Chloroperoxidase P)
          Length = 277

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = -3

Query: 370 LIVWGEFDQIFPVAKAHKVKEKLGEKAKLRIIPNTGHLPHQEDSKLFNQILLDFL 206
           L++ GE DQI P+A A     KL +   L+  P   H     ++ + N  LL F+
Sbjct: 221 LVLHGEDDQIVPIADAALKSIKLLQNGTLKTYPGYSHGMLTVNADVLNADLLAFV 275



to top

>LIP1_PSYIM (Q02104) Lipase 1 precursor (EC 3.1.1.3) (Triacylglycerol lipase)|
          Length = 317

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 14/42 (33%), Positives = 26/42 (61%)
 Frame = -3

Query: 370 LIVWGEFDQIFPVAKAHKVKEKLGEKAKLRIIPNTGHLPHQE 245
           L+VWG+ DQI      + +K K+  +A++ ++ + GH+P  E
Sbjct: 257 LVVWGDKDQIIKPETVNLIK-KIIPQAQVIMMEDVGHVPMVE 297



to top

>OSH7_YEAST (P38755) Oxysterol-binding protein homolog 7|
          Length = 437

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = +3

Query: 117 SSIKTCMHARNQSSSYLPAAMPLEEEGGGSRKSRRIWLK 233
           SS KT +   +Q     P   PLEE+  G  +SRR+W K
Sbjct: 298 SSKKTVLFDTHQHFPLAPKVRPLEEQ--GEYESRRLWKK 334



to top

>Y406_CAMJR (Q5HWB0) UPF0078 membrane protein CJE0406|
          Length = 202

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
 Frame = -3

Query: 424 KGIASGHGFEITPLPQEVL---IVWGEFDQIFPVA 329
           KGIA+G G  I  LP EVL   IVW    +IF ++
Sbjct: 111 KGIATGAGAMIVLLPLEVLTAFIVWVVIGKIFKIS 145



to top

>Y357_CAMJE (Q9PIE4) UPF0078 membrane protein Cj0357c|
          Length = 202

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
 Frame = -3

Query: 424 KGIASGHGFEITPLPQEVL---IVWGEFDQIFPVA 329
           KGIA+G G  I  LP EVL   IVW    +IF ++
Sbjct: 111 KGIATGAGAMIVLLPLEVLTAFIVWVVIGKIFKIS 145



to top

>LIP3_MORS1 (P24640) Lipase 3 precursor (EC 3.1.1.3) (Triacylglycerol lipase)|
          Length = 315

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = -3

Query: 370 LIVWGEFDQIFPVAKAHKVKEKLGEKAKLRIIPNTGHLPHQEDSK 236
           L+VWG+ DQ+        +KE +  +A++ ++ + GH+P  E  K
Sbjct: 257 LVVWGDKDQVIKPETTELIKEII-PQAQVIMMNDVGHVPMVEAVK 300


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,425,019
Number of Sequences: 219361
Number of extensions: 1119944
Number of successful extensions: 3910
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3909
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top