>ref|XM_462802.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1011

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 131/162 (80%)
 Strand = Plus / Minus

                                                                       
Query: 200 aggcagcaggaagtcgaggaggatctggttgaagagcttggagtcctcctggtgcgggag 259
           |||||||| ||| | ||| ||||| | |||||| | |||||  |||||||||||||  ||
Sbjct: 981 aggcagcaagaacttgagcaggatatcgttgaacatcttgggatcctcctggtgcgccag 922

                                                                       
Query: 260 gtggcccgtgtttgggatgatcctcaacttcgccttctcccccagcttctccttcacctt 319
           ||| |||||||| || || ||| ||| | ||||||||||||| ||| |||| ||||| ||
Sbjct: 921 gtgccccgtgttcggtattatcttcaccgtcgccttctccccaagcatctctttcacttt 862

                                                     
Query: 320 gtgcgccttggccaccggaaagatctggtcgaactctcccca 361
           ||| || ||  |||| || || |||||||||||||| |||||
Sbjct: 861 gtgtgctttctccacagggaaaatctggtcgaactcccccca 820

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 83/102 (81%)
 Strand = Plus / Plus

                                                                           
Query: 200     aggcagcaggaagtcgaggaggatctggttgaagagcttggagtcctcctggtgcgggag 259
               |||||||| ||| | ||| ||||| | |||||| | |||||  |||||||||||||  ||
Sbjct: 3516036 aggcagcaagaacttgagcaggatatcgttgaacatcttgggatcctcctggtgcgccag 3516095

                                                         
Query: 260     gtggcccgtgtttgggatgatcctcaacttcgccttctcccc 301
               ||| |||||||| || || ||| ||| | |||||||||||||
Sbjct: 3516096 gtgccccgtgttcggtattatcttcaccgtcgccttctcccc 3516137



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 166      tgccggcggcgatgccgttg 185
                ||||||||||||||||||||
Sbjct: 31192162 tgccggcggcgatgccgttg 31192143

>dbj|AP003339.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1276_B06
          Length = 175174

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 83/102 (81%)
 Strand = Plus / Plus

                                                                         
Query: 200   aggcagcaggaagtcgaggaggatctggttgaagagcttggagtcctcctggtgcgggag 259
             |||||||| ||| | ||| ||||| | |||||| | |||||  |||||||||||||  ||
Sbjct: 84104 aggcagcaagaacttgagcaggatatcgttgaacatcttgggatcctcctggtgcgccag 84163

                                                       
Query: 260   gtggcccgtgtttgggatgatcctcaacttcgccttctcccc 301
             ||| |||||||| || || ||| ||| | |||||||||||||
Sbjct: 84164 gtgccccgtgttcggtattatcttcaccgtcgccttctcccc 84205

>dbj|AP002912.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0028E10
          Length = 140791

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 83/102 (81%)
 Strand = Plus / Plus

                                                                          
Query: 200    aggcagcaggaagtcgaggaggatctggttgaagagcttggagtcctcctggtgcgggag 259
              |||||||| ||| | ||| ||||| | |||||| | |||||  |||||||||||||  ||
Sbjct: 102796 aggcagcaagaacttgagcaggatatcgttgaacatcttgggatcctcctggtgcgccag 102855

                                                        
Query: 260    gtggcccgtgtttgggatgatcctcaacttcgccttctcccc 301
              ||| |||||||| || || ||| ||| | |||||||||||||
Sbjct: 102856 gtgccccgtgttcggtattatcttcaccgtcgccttctcccc 102897

>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 163     atttgccggcggcgatgccgttggag 188
               ||||||||||||||||||| ||||||
Sbjct: 3083176 atttgccggcggcgatgcccttggag 3083201

>gb|AC118535.1| Homo sapiens chromosome 19 clone LLNLR-287H1, complete sequence
          Length = 32887

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 296   ctcccccagcttctccttcacc 317
             ||||||||||||||||||||||
Sbjct: 29752 ctcccccagcttctccttcacc 29731

>gb|AC005788.1|AC005788 Homo sapiens chromosome 19, cosmid R26652, complete sequence
          Length = 36224

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 296  ctcccccagcttctccttcacc 317
            ||||||||||||||||||||||
Sbjct: 9814 ctcccccagcttctccttcacc 9793

>emb|AL731552.11| Mouse DNA sequence from clone RP23-113K24 on chromosome 2, complete
             sequence
          Length = 203304

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 185   ggaggaggaaggcggaggcagcagga 210
             ||||||||||||||||||||| ||||
Sbjct: 65405 ggaggaggaaggcggaggcaggagga 65380

>emb|CR655012.2|CNS0F4DM Tetraodon nigroviridis full-length cDNA
          Length = 907

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 118 cctctatcaaaacctgcatgc 138
           |||||||||||||||||||||
Sbjct: 495 cctctatcaaaacctgcatgc 515

>emb|AL606753.12| Human DNA sequence from clone RP11-2P2 on chromosome 1 Contains the 5'
             end of the PLXNA2 gene for plexin A2 and a heterogeneous
             nuclear ribonucleoprotein D-like (HNRPDL) pseudogene,
             complete sequence
          Length = 66984

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 372   acttcctgggggagtggagtg 392
             |||||||||||||||||||||
Sbjct: 44599 acttcctgggggagtggagtg 44579

>gb|AC109462.2| Homo sapiens chromosome 16 clone RP11-26L20, complete sequence
          Length = 174191

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 194    aggcggaggcagcaggaagtc 214
              |||||||||||||||||||||
Sbjct: 126107 aggcggaggcagcaggaagtc 126087

>gb|AC009165.6|AC009165 Homo sapiens chromosome 16 clone RP11-7O2, complete sequence
          Length = 152225

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 194   aggcggaggcagcaggaagtc 214
             |||||||||||||||||||||
Sbjct: 76875 aggcggaggcagcaggaagtc 76855

>ref|XM_392541.2| PREDICTED: Apis mellifera similar to ENSANGP00000014221 (LOC409012),
            mRNA
          Length = 8313

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 287  cttcgccttctcccccagcttctccttcacctt 319
            |||||||| | || |||||||||||||||||||
Sbjct: 5151 cttcgcctccgcctccagcttctccttcacctt 5119

>gb|AC092722.5| Homo sapiens chromosome 16 clone RP11-517M14, complete sequence
          Length = 189822

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 194    aggcggaggcagcaggaagtc 214
              |||||||||||||||||||||
Sbjct: 106751 aggcggaggcagcaggaagtc 106771

>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 160     gctatttgccggcggcgatgccgtt 184
               ||||| |||||||||||||||||||
Sbjct: 1536869 gctatctgccggcggcgatgccgtt 1536893

>gb|AC100043.9| Mus musculus chromosome 3, clone RP23-32D13, complete sequence
          Length = 234931

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 437   cttcccctctctttggacag 456
             ||||||||||||||||||||
Sbjct: 34469 cttcccctctctttggacag 34488

>gb|AC146791.12| Medicago truncatula clone mth2-123m17, complete sequence
          Length = 130971

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 215   gaggaggatctggttgaaga 234
             ||||||||||||||||||||
Sbjct: 93378 gaggaggatctggttgaaga 93397

>emb|X57850.1|BNCRU4RN B.napus cru4 mRNA for cruciferin cru4 subunit
          Length = 1457

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 5   gaaacaaaacaacatcttca 24
           ||||||||||||||||||||
Sbjct: 474 gaaacaaaacaacatcttca 493

>emb|BX572601.1| Rhodopseudomonas palustris CGA009 complete genome; segment 9/16
          Length = 348580

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 165   ttgccggcggcgatgccgttggag 188
             ||||||||||||||||| ||||||
Sbjct: 11995 ttgccggcggcgatgcccttggag 11972

>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7
          Length = 349122

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 166    tgccggcggcgatgccgttg 185
              ||||||||||||||||||||
Sbjct: 205461 tgccggcggcgatgccgttg 205442

>emb|AL662938.3|OSJN00138 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ990528_30,
             complete sequence
          Length = 88547

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 219   aggatctggttgaagagctt 238
             ||||||||||||||||||||
Sbjct: 72161 aggatctggttgaagagctt 72180

>emb|CR938710.1| Medicago truncatula chromosome 5 clone mth2-170k9, COMPLETE SEQUENCE
          Length = 123977

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 215   gaggaggatctggttgaaga 234
             ||||||||||||||||||||
Sbjct: 46491 gaggaggatctggttgaaga 46510

>gb|AC116021.5| Homo sapiens chromosome 11, clone CTD-2589M5, complete sequence
          Length = 167757

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 292   ccttctcccccagcttctcc 311
             ||||||||||||||||||||
Sbjct: 81670 ccttctcccccagcttctcc 81689

>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence
          Length = 168794

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 166    tgccggcggcgatgccgttg 185
              ||||||||||||||||||||
Sbjct: 112566 tgccggcggcgatgccgttg 112547

>gb|AC095353.9| Homo sapiens Xp BAC RP11-615L18 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 142000

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 304  gcttctccttcaccttgtgc 323
            ||||||||||||||||||||
Sbjct: 2188 gcttctccttcaccttgtgc 2169

>gb|AY517643.1| Chlamydomonas reinhardtii phosphoenolpyruvate carboxylase (Ppc2)
            mRNA, complete cds
          Length = 4776

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 166  tgccggcggcgatgccgttg 185
            ||||||||||||||||||||
Sbjct: 3649 tgccggcggcgatgccgttg 3630

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 219      aggatctggttgaagagctt 238
                ||||||||||||||||||||
Sbjct: 24617016 aggatctggttgaagagctt 24617035

>dbj|AP003376.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0014K08
          Length = 177263

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 166    tgccggcggcgatgccgttg 185
              ||||||||||||||||||||
Sbjct: 118507 tgccggcggcgatgccgttg 118488

>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 166     tgccggcggcgatgccgttg 185
               ||||||||||||||||||||
Sbjct: 3372041 tgccggcggcgatgccgttg 3372060

>emb|X78432.1|TDDEH38 T.durum Desf. (Siliana) Dehydrin mRNA, clone pTd38
          Length = 555

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 302 cagcttctccttcaccttgt 321
           ||||||||||||||||||||
Sbjct: 330 cagcttctccttcaccttgt 311

>emb|X78430.1|TDDEH25 T.durum Desf. (Siliana) Dehydrin mRNA, clone pTd25a
          Length = 565

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 302 cagcttctccttcaccttgt 321
           ||||||||||||||||||||
Sbjct: 336 cagcttctccttcaccttgt 317

>emb|AL512542.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0522A01, complete
             sequence
          Length = 97077

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 219   aggatctggttgaagagctt 238
             ||||||||||||||||||||
Sbjct: 17532 aggatctggttgaagagctt 17551

>gb|AE016830.1| Enterococcus faecalis V583, complete genome
          Length = 3218031

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     tgaaacaaaacaacatcttc 23
             ||||||||||||||||||||
Sbjct: 48004 tgaaacaaaacaacatcttc 47985

>emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0091E11,
            complete sequence
          Length = 133856

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 219  aggatctggttgaagagctt 238
            ||||||||||||||||||||
Sbjct: 6539 aggatctggttgaagagctt 6558

>dbj|AP004369.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-448P19, complete
             sequences
          Length = 158310

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 116   atcctctatcaaaacctgca 135
             ||||||||||||||||||||
Sbjct: 90780 atcctctatcaaaacctgca 90761


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,150,516
Number of Sequences: 3902068
Number of extensions: 5150516
Number of successful extensions: 96642
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96132
Number of HSP's gapped (non-prelim): 510
length of query: 459
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 437
effective length of database: 17,147,199,772
effective search space: 7493326300364
effective search space used: 7493326300364
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)