ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart26c01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|Z49146.1|HVPAL3MR H.vulgare partial PAL mRNA for phenylalani... 414 e-113
2gb|AY973992.1| Bambusa ventricosa putative phenylalanine ammonia... 176 2e-41
3ref|XM_466843.1| Oryza sativa (japonica cultivar-group), mRNA 168 5e-39
4emb|X16099.1|OSPAL Rice gene for phenylalanine ammonia-lyase (EC... 168 5e-39
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 168 5e-39
6dbj|AP005000.3| Oryza sativa (japonica cultivar-group) genomic D... 168 5e-39
7dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic D... 168 5e-39
8dbj|AK102817.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 5e-39
9dbj|AK058306.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 5e-39
10dbj|AK067923.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 1e-36
11ref|XM_473192.1| Oryza sativa (japonica cultivar-group), predic... 155 7e-35
12gb|AY224546.1| Oryza sativa (japonica cultivar-group) isolate 24... 155 7e-35
13emb|AL731616.5|OSJN00262 Oryza sativa genomic DNA, chromosome 4,... 155 7e-35
14dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 155 7e-35
15dbj|AK100346.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 7e-35
16emb|AL731629.2|OSJN00274 Oryza sativa genomic DNA, chromosome 4,... 155 7e-35
17gb|AY106831.1| Zea mays PCO142079 mRNA sequence 139 4e-30
18gb|AY103647.1| Zea mays PCO142084 mRNA sequence 133 3e-28
19gb|M95077.1|MZEORFR Zea mays putative phenylalanine ammonia lyas... 133 3e-28
20gb|L77912.1|MZEPAL Zea mays phenylalanine ammonia-lyase mRNA, co... 129 4e-27
21ref|XM_466849.1| Oryza sativa (japonica cultivar-group), mRNA 90 4e-15
22gb|BT018802.1| Zea mays clone EL01N0529D05.d mRNA sequence 90 4e-15
23emb|X87946.1|OSDNAZB8 O.sativa ZB8 gene 90 4e-15
24dbj|AK068993.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 4e-15
25gb|AY104679.1| Zea mays PCO142078 mRNA sequence 90 4e-15
26ref|XM_473196.1| Oryza sativa (japonica cultivar-group), predic... 82 9e-13
27dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 82 9e-13
28gb|AY005474.1| Triticum aestivum inducible phenylalanine ammonia... 82 9e-13
29dbj|AK067801.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 9e-13
30gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 82 9e-13
31emb|AL732380.4|CNS08C93 Oryza sativa chromosome 12, . BAC OSJNBb... 82 9e-13
32ref|XM_475254.1| Oryza sativa (japonica cultivar-group), predic... 74 2e-10
33gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome... 74 2e-10
34gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome... 74 2e-10
35gb|AY450643.1| Bambusa oldhamii phenylalanine ammonia-lyase (PAL... 74 2e-10
36emb|X99705.1|TAPALGEN1 T.aestivum PAL gene 74 2e-10
37dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 74 2e-10
38emb|X99725.1|TAPALGEN2 T.aestivum PAL gene, coding region 72 8e-10
39ref|XM_466846.1| Oryza sativa (japonica cultivar-group), mRNA 64 2e-07
40gb|L11883.1|WHTWALI4A Triticum aestivum phenylalanine ammonia-ly... 60 3e-06
41ref|XM_466845.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.003
42dbj|AK120127.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.003
43emb|Z15085.1|OSGP28G O.sativa GP28 gene (partial) 50 0.003
44emb|X99483.1|HVPAL6 H.vulgare mRNA for phenylalanine ammonia-lya... 50 0.003
45dbj|AK065208.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.003
46dbj|AK061959.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.003
47emb|Z49145.1|HVPAL2MR H.vulgare partial PAL mRNA for phenylalani... 46 0.047
48ref|XR_005088.1| PREDICTED: Mus musculus hypothetical protein LO... 42 0.74
49ref|XR_004983.1| PREDICTED: Mus musculus similar to preferential... 42 0.74
50ref|XM_112266.6| PREDICTED: Mus musculus similar to preferential... 42 0.74
51ref|XM_205435.6| PREDICTED: Mus musculus similar to preferential... 42 0.74
52emb|BX005100.9| Mouse DNA sequence from clone RP23-76P22 on chro... 42 0.74
53gb|AY036011.1| Manihot esculenta phenylalanine ammonia-lyase 1 (... 42 0.74
54dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.74
55dbj|AP006235.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.74
56dbj|AP005876.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.74
57gb|AC116769.11| Mus musculus chromosome 15, clone RP23-415L16, c... 42 0.74
58gb|AY098511.1| Ananas comosus phenylalanine ammonia-lyase mRNA, ... 42 0.74
59emb|AL626771.9| Mouse DNA sequence from clone RP23-281O10 on chr... 42 0.74
60emb|AL713865.10| Mouse DNA sequence from clone RP23-451D4 on chr... 42 0.74
61gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 2.9
62emb|BX005425.12| Zebrafish DNA sequence from clone DKEY-7O6 in l... 40 2.9 
>emb|Z49146.1|HVPAL3MR H.vulgare partial PAL mRNA for phenylalanine ammonia-lyase (1831 bp)
          Length = 1831

 Score =  414 bits (209), Expect = e-113
 Identities = 223/228 (97%)
 Strand = Plus / Minus

                                                                        
Query: 1    gaagnaagaacatgcacgaacggattaagcgtcttatttttggatgtactttggaagcct 60
            |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1589 gaagtaagaacatgcacgaacggattaagcgtcttatttttggatgtactttggaagcct 1530

                                                                        
Query: 61   cctcctctcctccacgggggcacggacgatccttcaaacgttgatgggcaggggctcgcc 120
            ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1529 cctcctctcctccacggtggcacggacgatccttcagacgttgatgggcaggggctcgcc 1470

                                                                        
Query: 121  gttccactccttgaggcactcgagcatggggtcgatgagcttgttctggctgatgcccag 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1469 gttccactccttgaggcactcgagcatggggtcgatgagcttgttctggctgatgccgag 1410

                                                            
Query: 181  gaaaaccttggtgcattcctcgccgggggacagcagcttctcgccggt 228
            ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1409 gaagaccttggtgcattcctcgccgggggacagcagcttctcgccggt 1362
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>gb|AY973992.1| Bambusa ventricosa putative phenylalanine ammonia-lyase mRNA,
            complete cds
          Length = 2353

 Score =  176 bits (89), Expect = 2e-41
 Identities = 119/129 (92%)
 Strand = Plus / Minus

                                                                        
Query: 100  gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 159
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2104 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 2045

                                                                        
Query: 160  cttgttctggctgatgcccaggaaaaccttggtgcattcctcgccgggggacagcagctt 219
            ||||  |||||||||||| | ||| |||||| |||| |||||||||||||||   |||||
Sbjct: 2044 cttgccctggctgatgccgatgaacaccttgttgcactcctcgccgggggacttgagctt 1985

                     
Query: 220  ctcgccggt 228
            |||||||||
Sbjct: 1984 ctcgccggt 1976
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>ref|XM_466843.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2502

 Score =  168 bits (85), Expect = 5e-39
 Identities = 118/129 (91%)
 Strand = Plus / Minus

                                                                        
Query: 100  gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 159
            ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 2189 gttgatgggaaggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgag 2130

                                                                        
Query: 160  cttgttctggctgatgcccaggaaaaccttggtgcattcctcgccgggggacagcagctt 219
            ||||  |||||||||||| ||||| |||||| |||| |||||||||||||||   |||||
Sbjct: 2129 cttgccctggctgatgccgaggaacaccttgttgcactcctcgccgggggacttgagctt 2070

                     
Query: 220  ctcgccggt 228
            |||||||||
Sbjct: 2069 ctcgccggt 2061
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>emb|X16099.1|OSPAL Rice gene for phenylalanine ammonia-lyase (EC 4.3.1.5)
          Length = 4412

 Score =  168 bits (85), Expect = 5e-39
 Identities = 118/129 (91%)
 Strand = Plus / Minus

                                                                        
Query: 100  gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 159
            ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 4066 gttgatgggaaggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgag 4007

                                                                        
Query: 160  cttgttctggctgatgcccaggaaaaccttggtgcattcctcgccgggggacagcagctt 219
            ||||  |||||||||||| ||||| |||||| |||| |||||||||||||||   |||||
Sbjct: 4006 cttgccctggctgatgccgaggaacaccttgttgcactcctcgccgggggacttgagctt 3947

                     
Query: 220  ctcgccggt 228
            |||||||||
Sbjct: 3946 ctcgccggt 3938
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  168 bits (85), Expect = 5e-39
 Identities = 118/129 (91%)
 Strand = Plus / Plus

                                                                            
Query: 100      gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 159
                ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 24992256 gttgatgggaaggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgag 24992315

                                                                            
Query: 160      cttgttctggctgatgcccaggaaaaccttggtgcattcctcgccgggggacagcagctt 219
                ||||  |||||||||||| ||||| |||||| |||| |||||||||||||||   |||||
Sbjct: 24992316 cttgccctggctgatgccgaggaacaccttgttgcactcctcgccgggggacttgagctt 24992375

                         
Query: 220      ctcgccggt 228
                |||||||||
Sbjct: 24992376 ctcgccggt 24992384



 Score = 89.7 bits (45), Expect = 4e-15
 Identities = 54/57 (94%)
 Strand = Plus / Plus

                                                                         
Query: 107      ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 163
                ||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||
Sbjct: 25025228 ggcaggggctcgccgttccactccttgaggcactcgagcaacgggtcgatgtgcttg 25025284



 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                            
Query: 103      gatgggcaggggctcgccgttccactccttgaggcactcgagca 146
                ||||||||||||| ||||||||||||||||||| ||||| ||||
Sbjct: 25011629 gatgggcaggggcgcgccgttccactccttgagacactcaagca 25011672



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                         
Query: 107      ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 163
                ||||| ||| |||| ||||| ||||||||||| |||||||  ||||||||| |||||
Sbjct: 25004085 ggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgatgtgcttg 25004141
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>dbj|AP005000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0042D01
          Length = 148305

 Score =  168 bits (85), Expect = 5e-39
 Identities = 118/129 (91%)
 Strand = Plus / Plus

                                                                        
Query: 100  gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 159
            ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 5244 gttgatgggaaggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgag 5303

                                                                        
Query: 160  cttgttctggctgatgcccaggaaaaccttggtgcattcctcgccgggggacagcagctt 219
            ||||  |||||||||||| ||||| |||||| |||| |||||||||||||||   |||||
Sbjct: 5304 cttgccctggctgatgccgaggaacaccttgttgcactcctcgccgggggacttgagctt 5363

                     
Query: 220  ctcgccggt 228
            |||||||||
Sbjct: 5364 ctcgccggt 5372



 Score = 89.7 bits (45), Expect = 4e-15
 Identities = 54/57 (94%)
 Strand = Plus / Plus

                                                                      
Query: 107   ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 163
             ||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||
Sbjct: 38216 ggcaggggctcgccgttccactccttgaggcactcgagcaacgggtcgatgtgcttg 38272



 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                         
Query: 103   gatgggcaggggctcgccgttccactccttgaggcactcgagca 146
             ||||||||||||| ||||||||||||||||||| ||||| ||||
Sbjct: 24617 gatgggcaggggcgcgccgttccactccttgagacactcaagca 24660



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                      
Query: 107   ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 163
             ||||| ||| |||| ||||| ||||||||||| |||||||  ||||||||| |||||
Sbjct: 17073 ggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgatgtgcttg 17129
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>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:B1215B07
          Length = 165957

 Score =  168 bits (85), Expect = 5e-39
 Identities = 118/129 (91%)
 Strand = Plus / Plus

                                                                          
Query: 100    gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 159
              ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 153539 gttgatgggaaggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgag 153598

                                                                          
Query: 160    cttgttctggctgatgcccaggaaaaccttggtgcattcctcgccgggggacagcagctt 219
              ||||  |||||||||||| ||||| |||||| |||| |||||||||||||||   |||||
Sbjct: 153599 cttgccctggctgatgccgaggaacaccttgttgcactcctcgccgggggacttgagctt 153658

                       
Query: 220    ctcgccggt 228
              |||||||||
Sbjct: 153659 ctcgccggt 153667



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                       
Query: 107    ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 163
              ||||| ||| |||| ||||| ||||||||||| |||||||  ||||||||| |||||
Sbjct: 165368 ggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgatgtgcttg 165424
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>dbj|AK102817.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108N04, full
            insert sequence
          Length = 2504

 Score =  168 bits (85), Expect = 5e-39
 Identities = 118/129 (91%)
 Strand = Plus / Minus

                                                                        
Query: 100  gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 159
            ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 2191 gttgatgggaaggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgag 2132

                                                                        
Query: 160  cttgttctggctgatgcccaggaaaaccttggtgcattcctcgccgggggacagcagctt 219
            ||||  |||||||||||| ||||| |||||| |||| |||||||||||||||   |||||
Sbjct: 2131 cttgccctggctgatgccgaggaacaccttgttgcactcctcgccgggggacttgagctt 2072

                     
Query: 220  ctcgccggt 228
            |||||||||
Sbjct: 2071 ctcgccggt 2063
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>dbj|AK058306.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H03, full
           insert sequence
          Length = 1298

 Score =  168 bits (85), Expect = 5e-39
 Identities = 118/129 (91%)
 Strand = Plus / Minus

                                                                       
Query: 100 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 159
           ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 983 gttgatgggaaggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgag 924

                                                                       
Query: 160 cttgttctggctgatgcccaggaaaaccttggtgcattcctcgccgggggacagcagctt 219
           ||||  |||||||||||| ||||| |||||| |||| |||||||||||||||   |||||
Sbjct: 923 cttgccctggctgatgccgaggaacaccttgttgcactcctcgccgggggacttgagctt 864

                    
Query: 220 ctcgccggt 228
           |||||||||
Sbjct: 863 ctcgccggt 855
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>dbj|AK067923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126B03, full
            insert sequence
          Length = 1531

 Score =  161 bits (81), Expect = 1e-36
 Identities = 117/129 (90%)
 Strand = Plus / Minus

                                                                        
Query: 100  gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 159
            ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1218 gttgatgggaaggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgag 1159

                                                                        
Query: 160  cttgttctggctgatgcccaggaaaaccttggtgcattcctcgccgggggacagcagctt 219
            ||||  |||||||||||| ||||| |||||| |||| ||| |||||||||||   |||||
Sbjct: 1158 cttgccctggctgatgccgaggaacaccttgttgcactccccgccgggggacttgagctt 1099

                     
Query: 220  ctcgccggt 228
            |||||||||
Sbjct: 1098 ctcgccggt 1090
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>ref|XM_473192.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2124

 Score =  155 bits (78), Expect = 7e-35
 Identities = 114/126 (90%)
 Strand = Plus / Minus

                                                                        
Query: 103  gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 162
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2118 gatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgatgagctt 2059

                                                                        
Query: 163  gttctggctgatgcccaggaaaaccttggtgcattcctcgccgggggacagcagcttctc 222
            |  || ||||||| ||||||| |||||| |||| |||||||||||||||   ||||||||
Sbjct: 2058 gcgctcgctgatggccaggaacaccttgttgcactcctcgccgggggacttgagcttctc 1999

                  
Query: 223  gccggt 228
             |||||
Sbjct: 1998 tccggt 1993
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>gb|AY224546.1| Oryza sativa (japonica cultivar-group) isolate 24080 phenylalanine
            ammonia-lyase mRNA, complete cds
          Length = 2016

 Score =  155 bits (78), Expect = 7e-35
 Identities = 114/126 (90%)
 Strand = Plus / Minus

                                                                        
Query: 103  gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 162
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2010 gatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgatgagctt 1951

                                                                        
Query: 163  gttctggctgatgcccaggaaaaccttggtgcattcctcgccgggggacagcagcttctc 222
            |  || ||||||| ||||||| |||||| |||| |||||||||||||||   ||||||||
Sbjct: 1950 gcgctcgctgatggccaggaacaccttgttgcactcctcgccgggggacttgagcttctc 1891

                  
Query: 223  gccggt 228
             |||||
Sbjct: 1890 tccggt 1885
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>emb|AL731616.5|OSJN00262 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073E02,
             complete sequence
          Length = 139080

 Score =  155 bits (78), Expect = 7e-35
 Identities = 114/126 (90%)
 Strand = Plus / Plus

                                                                         
Query: 103   gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 162
             ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 98032 gatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgatgagctt 98091

                                                                         
Query: 163   gttctggctgatgcccaggaaaaccttggtgcattcctcgccgggggacagcagcttctc 222
             |  || ||||||| ||||||| |||||| |||| |||||||||||||||   ||||||||
Sbjct: 98092 gcgctcgctgatggccaggaacaccttgttgcactcctcgccgggggacttgagcttctc 98151

                   
Query: 223   gccggt 228
              |||||
Sbjct: 98152 tccggt 98157



 Score = 81.8 bits (41), Expect = 9e-13
 Identities = 56/61 (91%)
 Strand = Plus / Plus

                                                                          
Query: 103    gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 162
              ||||||||| ||||||||||||||||||||||||||||||||||  | ||||||| ||||
Sbjct: 118218 gatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgctt 118277

               
Query: 163    g 163
              |
Sbjct: 118278 g 118278
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  155 bits (78), Expect = 7e-35
 Identities = 114/126 (90%)
 Strand = Plus / Plus

                                                                            
Query: 103      gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 162
                ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 25880622 gatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgatgagctt 25880681

                                                                            
Query: 163      gttctggctgatgcccaggaaaaccttggtgcattcctcgccgggggacagcagcttctc 222
                |  || ||||||| ||||||| |||||| |||| |||||||||||||||   ||||||||
Sbjct: 25880682 gcgctcgctgatggccaggaacaccttgttgcactcctcgccgggggacttgagcttctc 25880741

                      
Query: 223      gccggt 228
                 |||||
Sbjct: 25880742 tccggt 25880747



 Score = 81.8 bits (41), Expect = 9e-13
 Identities = 56/61 (91%)
 Strand = Plus / Plus

                                                                            
Query: 103      gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 162
                ||||||||| ||||||||||||||||||||||||||||||||||  | ||||||| ||||
Sbjct: 25900808 gatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgctt 25900867

                 
Query: 163      g 163
                |
Sbjct: 25900868 g 25900868
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>dbj|AK100346.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082J11, full
            insert sequence
          Length = 2510

 Score =  155 bits (78), Expect = 7e-35
 Identities = 114/126 (90%)
 Strand = Plus / Minus

                                                                        
Query: 103  gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 162
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2210 gatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgatgagctt 2151

                                                                        
Query: 163  gttctggctgatgcccaggaaaaccttggtgcattcctcgccgggggacagcagcttctc 222
            |  || ||||||| ||||||| |||||| |||| |||||||||||||||   ||||||||
Sbjct: 2150 gcgctcgctgatggccaggaacaccttgttgcactcctcgccgggggacttgagcttctc 2091

                  
Query: 223  gccggt 228
             |||||
Sbjct: 2090 tccggt 2085
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>emb|AL731629.2|OSJN00274 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0061C13,
            complete sequence
          Length = 139226

 Score =  155 bits (78), Expect = 7e-35
 Identities = 114/126 (90%)
 Strand = Plus / Plus

                                                                        
Query: 103  gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 162
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 6884 gatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgatgagctt 6943

                                                                        
Query: 163  gttctggctgatgcccaggaaaaccttggtgcattcctcgccgggggacagcagcttctc 222
            |  || ||||||| ||||||| |||||| |||| |||||||||||||||   ||||||||
Sbjct: 6944 gcgctcgctgatggccaggaacaccttgttgcactcctcgccgggggacttgagcttctc 7003

                  
Query: 223  gccggt 228
             |||||
Sbjct: 7004 tccggt 7009



 Score = 81.8 bits (41), Expect = 9e-13
 Identities = 56/61 (91%)
 Strand = Plus / Plus

                                                                         
Query: 103   gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 162
             ||||||||| ||||||||||||||||||||||||||||||||||  | ||||||| ||||
Sbjct: 27070 gatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgctt 27129

              
Query: 163   g 163
             |
Sbjct: 27130 g 27130
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>gb|AY106831.1| Zea mays PCO142079 mRNA sequence
          Length = 2299

 Score =  139 bits (70), Expect = 4e-30
 Identities = 112/126 (88%)
 Strand = Plus / Minus

                                                                        
Query: 103  gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 162
            |||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 1968 gatgggcaggggcttgccgtcccactccttgaggcagtcgagcatggggtcgatgagctt 1909

                                                                        
Query: 163  gttctggctgatgcccaggaaaaccttggtgcattcctcgccgggggacagcagcttctc 222
            |  || ||||| | ||||||| |||||| |||| |||||||||||||||   ||||||||
Sbjct: 1908 gccctcgctgagggccaggaacaccttgttgcactcctcgccgggggacttgagcttctc 1849

                  
Query: 223  gccggt 228
            ||||||
Sbjct: 1848 gccggt 1843
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>gb|AY103647.1| Zea mays PCO142084 mRNA sequence
          Length = 2598

 Score =  133 bits (67), Expect = 3e-28
 Identities = 115/131 (87%)
 Strand = Plus / Minus

                                                                        
Query: 98   acgttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatg 157
            |||||||||||||| |||| ||||| |||||||||||||||||||||||||||||| | |
Sbjct: 2214 acgttgatgggcagcggcttgccgtcccactccttgaggcactcgagcatggggtccacg 2155

                                                                        
Query: 158  agcttgttctggctgatgcccaggaaaaccttggtgcattcctcgccgggggacagcagc 217
            ||||||  |||||||||||| | ||| |||||| |||| |||||||||||||||   |||
Sbjct: 2154 agcttgccctggctgatgccgacgaacaccttgttgcactcctcgccgggggacttgagc 2095

                       
Query: 218  ttctcgccggt 228
             ||||||||||
Sbjct: 2094 ctctcgccggt 2084
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>gb|M95077.1|MZEORFR Zea mays putative phenylalanine ammonia lyase mRNA, partial cds
          Length = 190

 Score =  133 bits (67), Expect = 3e-28
 Identities = 115/131 (87%)
 Strand = Plus / Minus

                                                                       
Query: 98  acgttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatg 157
           |||||||||||||| |||| ||||| |||||||||||||||||||||||||||||| | |
Sbjct: 180 acgttgatgggcagcggcttgccgtcccactccttgaggcactcgagcatggggtccacg 121

                                                                       
Query: 158 agcttgttctggctgatgcccaggaaaaccttggtgcattcctcgccgggggacagcagc 217
           ||||||  |||||||||||| | ||| |||||| |||| |||||||||||||||   |||
Sbjct: 120 agcttgccctggctgatgccgacgaacaccttgttgcactcctcgccgggggacttgagc 61

                      
Query: 218 ttctcgccggt 228
            ||||||||||
Sbjct: 60  ctctcgccggt 50
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>gb|L77912.1|MZEPAL Zea mays phenylalanine ammonia-lyase mRNA, complete cds
          Length = 2488

 Score =  129 bits (65), Expect = 4e-27
 Identities = 113/129 (87%)
 Strand = Plus / Minus

                                                                        
Query: 100  gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 159
            |||||||||||| |||| ||||| |||||||||||||||||||||||||||||| | |||
Sbjct: 2216 gttgatgggcagcggcttgccgtcccactccttgaggcactcgagcatggggtccacgag 2157

                                                                        
Query: 160  cttgttctggctgatgcccaggaaaaccttggtgcattcctcgccgggggacagcagctt 219
            ||||  |||||||||||| | ||| |||||| |||| |||||||||||||||   ||| |
Sbjct: 2156 cttgccctggctgatgccgacgaacaccttgttgcactcctcgccgggggacttgagcct 2097

                     
Query: 220  ctcgccggt 228
            |||||||||
Sbjct: 2096 ctcgccggt 2088
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>ref|XM_466849.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2407

 Score = 89.7 bits (45), Expect = 4e-15
 Identities = 54/57 (94%)
 Strand = Plus / Minus

                                                                     
Query: 107  ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 163
            ||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||
Sbjct: 2167 ggcaggggctcgccgttccactccttgaggcactcgagcaacgggtcgatgtgcttg 2111
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>gb|BT018802.1| Zea mays clone EL01N0529D05.d mRNA sequence
          Length = 1451

 Score = 89.7 bits (45), Expect = 4e-15
 Identities = 90/105 (85%)
 Strand = Plus / Minus

                                                                        
Query: 107  ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 166
            ||||||||| ||||||||||||||||||||||||||||||  ||||||||| |||||  |
Sbjct: 1116 ggcaggggcgcgccgttccactccttgaggcactcgagcagcgggtcgatgtgcttgcgc 1057

                                                         
Query: 167  tggctgatgcccaggaaaaccttggtgcattcctcgccgggggac 211
            ||| ||||| ||| ||  |||||| ||   |||||||||||||||
Sbjct: 1056 tggttgatggccacgagcaccttgttgagctcctcgccgggggac 1012
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>emb|X87946.1|OSDNAZB8 O.sativa ZB8 gene
          Length = 4660

 Score = 89.7 bits (45), Expect = 4e-15
 Identities = 54/57 (94%)
 Strand = Plus / Minus

                                                                     
Query: 107  ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 163
            ||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||
Sbjct: 4566 ggcaggggctcgccgttccactccttgaggcactcgagcaacgggtcgatgtgcttg 4510
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>dbj|AK068993.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001A06, full
            insert sequence
          Length = 2406

 Score = 89.7 bits (45), Expect = 4e-15
 Identities = 54/57 (94%)
 Strand = Plus / Minus

                                                                     
Query: 107  ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 163
            ||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||
Sbjct: 2166 ggcaggggctcgccgttccactccttgaggcactcgagcaacgggtcgatgtgcttg 2110
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>gb|AY104679.1| Zea mays PCO142078 mRNA sequence
          Length = 1864

 Score = 89.7 bits (45), Expect = 4e-15
 Identities = 90/105 (85%)
 Strand = Plus / Minus

                                                                        
Query: 107  ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 166
            ||||||||| ||||||||||||||||||||||||||||||  ||||||||| |||||  |
Sbjct: 1562 ggcaggggcgcgccgttccactccttgaggcactcgagcagcgggtcgatgtgcttgcgc 1503

                                                         
Query: 167  tggctgatgcccaggaaaaccttggtgcattcctcgccgggggac 211
            ||| ||||| ||| ||  |||||| ||   |||||||||||||||
Sbjct: 1502 tggttgatggccacgagcaccttgttgagctcctcgccgggggac 1458
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>ref|XM_473196.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2145

 Score = 81.8 bits (41), Expect = 9e-13
 Identities = 56/61 (91%)
 Strand = Plus / Minus

                                                                        
Query: 103  gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 162
            ||||||||| ||||||||||||||||||||||||||||||||||  | ||||||| ||||
Sbjct: 2139 gatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgctt 2080

             
Query: 163  g 163
            |
Sbjct: 2079 g 2079
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 81.8 bits (41), Expect = 9e-13
 Identities = 56/61 (91%)
 Strand = Plus / Plus

                                                                            
Query: 103      gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 162
                ||||||||| ||||||||||||||||||||||||||||||||||  | ||||||| ||||
Sbjct: 16320140 gatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgctt 16320199

                 
Query: 163      g 163
                |
Sbjct: 16320200 g 16320200
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>gb|AY005474.1| Triticum aestivum inducible phenylalanine ammonia-lyase mRNA, partial
            cds
          Length = 1933

 Score = 81.8 bits (41), Expect = 9e-13
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                     
Query: 107  ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 163
            ||||||||||||||||||||||||||||||||||| ||||  ||||||||| |||||
Sbjct: 1625 ggcaggggctcgccgttccactccttgaggcactccagcagcgggtcgatgtgcttg 1569
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>dbj|AK067801.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118I15, full
            insert sequence
          Length = 2551

 Score = 81.8 bits (41), Expect = 9e-13
 Identities = 56/61 (91%)
 Strand = Plus / Minus

                                                                        
Query: 103  gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 162
            ||||||||| ||||||||||||||||||||||||||||||||||  | ||||||| ||||
Sbjct: 2264 gatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgctt 2205

             
Query: 163  g 163
            |
Sbjct: 2204 g 2204
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 81.8 bits (41), Expect = 9e-13
 Identities = 56/61 (91%)
 Strand = Plus / Plus

                                                                            
Query: 103      gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 162
                ||||||||| ||||||||||||||||||||||||||||||||||  | ||||||| ||||
Sbjct: 16273373 gatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgctt 16273432

                 
Query: 163      g 163
                |
Sbjct: 16273433 g 16273433
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>emb|AL732380.4|CNS08C93 Oryza sativa chromosome 12, . BAC OSJNBb0119N22 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 79613

 Score = 81.8 bits (41), Expect = 9e-13
 Identities = 56/61 (91%)
 Strand = Plus / Plus

                                                                         
Query: 103   gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 162
             ||||||||| ||||||||||||||||||||||||||||||||||  | ||||||| ||||
Sbjct: 67191 gatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgctt 67250

              
Query: 163   g 163
             |
Sbjct: 67251 g 67251
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>ref|XM_475254.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2151

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                     
Query: 107  ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 163
            ||||| ||| ||||||||||||||||||||||||||||||  ||||||||| |||||
Sbjct: 2141 ggcagtggcgcgccgttccactccttgaggcactcgagcagcgggtcgatgtgcttg 2085
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>gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0044P19,
              complete sequence
          Length = 176917

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                       
Query: 107    ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 163
              ||||| ||| ||||||||||||||||||||||||||||||  ||||||||| |||||
Sbjct: 122631 ggcagtggcgcgccgttccactccttgaggcactcgagcagcgggtcgatgtgcttg 122687
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>gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636F09,
             complete sequence
          Length = 177374

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                      
Query: 107   ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 163
             ||||| ||| ||||||||||||||||||||||||||||||  ||||||||| |||||
Sbjct: 65212 ggcagtggcgcgccgttccactccttgaggcactcgagcagcgggtcgatgtgcttg 65268
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>gb|AY450643.1| Bambusa oldhamii phenylalanine ammonia-lyase (PAL1) mRNA, complete
            cds
          Length = 2139

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 55/61 (90%)
 Strand = Plus / Minus

                                                                        
Query: 103  gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 162
            ||||||||| ||||||||||||||||||||||||||||| ||||  ||||| ||| ||||
Sbjct: 2133 gatgggcagtggctcgccgttccactccttgaggcactcaagcagcgggtcaatgtgctt 2074

             
Query: 163  g 163
            |
Sbjct: 2073 g 2073
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>emb|X99705.1|TAPALGEN1 T.aestivum PAL gene
          Length = 3444

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                     
Query: 107  ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 163
            ||||||||||||||||||||||||||||||||||| ||||  | ||||||| |||||
Sbjct: 3097 ggcaggggctcgccgttccactccttgaggcactccagcagcgcgtcgatgtgcttg 3041
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                         
Query: 107      ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 163
                ||||| ||| ||||||||||||||||||||||||||||||  ||||||||| |||||
Sbjct: 20809407 ggcagtggcgcgccgttccactccttgaggcactcgagcagcgggtcgatgtgcttg 20809463
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>emb|X99725.1|TAPALGEN2 T.aestivum PAL gene, coding region
          Length = 1419

 Score = 71.9 bits (36), Expect = 8e-10
 Identities = 39/40 (97%)
 Strand = Plus / Minus

                                                    
Query: 107  ggcaggggctcgccgttccactccttgaggcactcgagca 146
            ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1011 ggcaggggctcgccgttccactccttgaggcactcaagca 972
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>ref|XM_466846.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2142

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                        
Query: 103  gatgggcaggggctcgccgttccactccttgaggcactcgagca 146
            ||||||||||||| ||||||||||||||||||| ||||| ||||
Sbjct: 2136 gatgggcaggggcgcgccgttccactccttgagacactcaagca 2093
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>gb|L11883.1|WHTWALI4A Triticum aestivum phenylalanine ammonia-lyase (wali4) mRNA, 3' end,
           partial cds
          Length = 634

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                 
Query: 110 aggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 163
           |||||||||||||||||||||||||| ||||| ||||  | ||||||| |||||
Sbjct: 376 aggggctcgccgttccactccttgagacactccagcagcgcgtcgatgtgcttg 323
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>ref|XM_466845.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2369

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                     
Query: 107  ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 163
            ||||| ||| |||| ||||| ||||||||||| |||||||  ||||||||| |||||
Sbjct: 2296 ggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgatgtgcttg 2240
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>dbj|AK120127.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026F02, full
            insert sequence
          Length = 2594

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                     
Query: 107  ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 163
            ||||| ||| |||| ||||| ||||||||||| |||||||  ||||||||| |||||
Sbjct: 2296 ggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgatgtgcttg 2240
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>emb|Z15085.1|OSGP28G O.sativa GP28 gene (partial)
          Length = 4843

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                     
Query: 107  ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 163
            ||||| ||| |||| ||||| ||||||||||| |||||||  ||||||||| |||||
Sbjct: 4725 ggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgatgtgcttg 4669
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>emb|X99483.1|HVPAL6 H.vulgare mRNA for phenylalanine ammonia-lyase, pal6
          Length = 1251

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                     
Query: 107  ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 163
            ||||| |||||||| ||||||||||||||||| || ||||  | ||||||| |||||
Sbjct: 1046 ggcagaggctcgccattccactccttgaggcattccagcagcgcgtcgatgtgcttg 990
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>dbj|AK065208.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002F15, full
            insert sequence
          Length = 1835

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                     
Query: 107  ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 163
            ||||| ||| |||| ||||| ||||||||||| |||||||  ||||||||| |||||
Sbjct: 1537 ggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgatgtgcttg 1481
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>dbj|AK061959.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-G01, full
            insert sequence
          Length = 1589

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                     
Query: 107  ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 163
            ||||| ||| |||| ||||| ||||||||||| |||||||  ||||||||| |||||
Sbjct: 1253 ggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgatgtgcttg 1197
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>emb|Z49145.1|HVPAL2MR H.vulgare partial PAL mRNA for phenylalanine ammonia-lyase (1670 bp)
          Length = 1670

 Score = 46.1 bits (23), Expect = 0.047
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 107  ggcaggggctcgccgttccactccttgaggcactc 141
            ||||||||||| || ||||||||||| ||||||||
Sbjct: 1420 ggcaggggctcaccattccactccttcaggcactc 1386
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>ref|XR_005088.1| PREDICTED: Mus musculus hypothetical protein LOC677558 (LOC677558),
           mRNA
          Length = 1008

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 36  atttttggatgtactttggaa 56
           |||||||||||||||||||||
Sbjct: 951 atttttggatgtactttggaa 971
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>ref|XR_004983.1| PREDICTED: Mus musculus similar to preferentially expressed antigen
            in melanoma like 5 (LOC676880), mRNA
          Length = 1639

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 36   atttttggatgtactttggaa 56
            |||||||||||||||||||||
Sbjct: 1582 atttttggatgtactttggaa 1602
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>ref|XM_112266.6| PREDICTED: Mus musculus similar to preferentially expressed antigen
            in melanoma like 5 (LOC195555), mRNA
          Length = 1636

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 36   atttttggatgtactttggaa 56
            |||||||||||||||||||||
Sbjct: 1579 atttttggatgtactttggaa 1599
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>ref|XM_205435.6| PREDICTED: Mus musculus similar to preferentially expressed antigen
            in melanoma like 5 (LOC279185), mRNA
          Length = 1636

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 36   atttttggatgtactttggaa 56
            |||||||||||||||||||||
Sbjct: 1579 atttttggatgtactttggaa 1599
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>emb|BX005100.9| Mouse DNA sequence from clone RP23-76P22 on chromosome 11 Contains part
              of the gene for a novel protein (C230094A16Rik), the gene
              for a novel protein (4931440F15Rik) similar to Mus musculus
              feminization 1 homolog a (C. elegans) (Fem1a), a ribosomal
              protein L23 (Rpl23) pseudogene, a preferentially expressed
              antigen in melanoma like 5 (Pramel5) pseudogene and a CpG
              island, complete sequence
          Length = 193116

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 36     atttttggatgtactttggaa 56
              |||||||||||||||||||||
Sbjct: 174370 atttttggatgtactttggaa 174390
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>gb|AY036011.1| Manihot esculenta phenylalanine ammonia-lyase 1 (PAL1) mRNA, complete
            cds
          Length = 2253

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 122  ttccactccttgaggcactcgagcatggg 150
            ||||||||||||||||| || ||||||||
Sbjct: 2185 ttccactccttgaggcattcaagcatggg 2157
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 53      ggaagcctcctcctctcctcc 73
               |||||||||||||||||||||
Sbjct: 7993897 ggaagcctcctcctctcctcc 7993917
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>dbj|AP006235.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0017N10
          Length = 168535

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 53     ggaagcctcctcctctcctcc 73
              |||||||||||||||||||||
Sbjct: 106540 ggaagcctcctcctctcctcc 106560
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>dbj|AP005876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
            clone:OSJNBa0092O08
          Length = 145596

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 53   ggaagcctcctcctctcctcc 73
            |||||||||||||||||||||
Sbjct: 9002 ggaagcctcctcctctcctcc 9022
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>gb|AC116769.11| Mus musculus chromosome 15, clone RP23-415L16, complete sequence
          Length = 201535

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 48    actttggaagcctcctcctct 68
             |||||||||||||||||||||
Sbjct: 44602 actttggaagcctcctcctct 44582
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>gb|AY098511.1| Ananas comosus phenylalanine ammonia-lyase mRNA, partial cds
          Length = 1110

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 122 ttccactccttgaggcactcgagcatggg 150
           ||||||||||| | |||||||||||||||
Sbjct: 864 ttccactccttcaagcactcgagcatggg 836
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>emb|AL626771.9| Mouse DNA sequence from clone RP23-281O10 on chromosome 4, complete
             sequence
          Length = 185594

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 36    atttttggatgtactttggaa 56
             |||||||||||||||||||||
Sbjct: 42223 atttttggatgtactttggaa 42243
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>emb|AL713865.10| Mouse DNA sequence from clone RP23-451D4 on chromosome 4, complete
              sequence
          Length = 172962

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 36     atttttggatgtactttggaa 56
              |||||||||||||||||||||
Sbjct: 147699 atttttggatgtactttggaa 147719



 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 36    atttttggatgtactttggaa 56
             |||||||||||||||||||||
Sbjct: 36754 atttttggatgtactttggaa 36774
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 193     gcattcctcgccgggggacagcag 216
               |||| |||||||||||||||||||
Sbjct: 1008707 gcatacctcgccgggggacagcag 1008730
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>emb|BX005425.12| Zebrafish DNA sequence from clone DKEY-7O6 in linkage group 8, complete
              sequence
          Length = 252440

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     taagcgtcttatttttggat 45
              ||||||||||||||||||||
Sbjct: 198253 taagcgtcttatttttggat 198234


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,943,981
Number of Sequences: 3902068
Number of extensions: 1943981
Number of successful extensions: 44762
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44490
Number of HSP's gapped (non-prelim): 272
length of query: 228
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 206
effective length of database: 17,147,199,772
effective search space: 3532323153032
effective search space used: 3532323153032
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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