Clone Name | rbart26b08 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | SMS2_CAEEL (Q20735) Putative phosphatidylcholine:ceramide cholin... | 30 | 2.2 |
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>SMS2_CAEEL (Q20735) Putative phosphatidylcholine:ceramide| cholinephosphotransferase 2 (EC 2.7.-.-) (Sphingomyelin synthase 2) Length = 335 Score = 29.6 bits (65), Expect = 2.2 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = -3 Query: 204 DFVPYQPLPLINCIIFPXQRW 142 D VP QPLP + +I P QRW Sbjct: 82 DVVPRQPLPDLTFMIIPQQRW 102 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 32,200,126 Number of Sequences: 219361 Number of extensions: 483042 Number of successful extensions: 947 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 941 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 947 length of database: 80,573,946 effective HSP length: 56 effective length of database: 68,289,730 effective search space used: 1638953520 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)