>SYI_ENTFA (Q836V1) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
           ligase) (IleRS)
          Length = 926

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = +2

Query: 11  WSFIYSMEKLLQLATQCNKPSRHALKQQESIFKTWM-HLDLQEKN*FRDEVLKTRRHAAH 187
           WSF+   E+ +QLA     P       +E +  TW   +D      FRD VLK    A H
Sbjct: 767 WSFLQEEEEYVQLA---EFPGYETFTNEEELMDTWAAFMD------FRDNVLKALEEARH 817

Query: 188 S 190
           S
Sbjct: 818 S 818

>VAX2_MOUSE (Q9WTP9) Ventral anterior homeobox 2 (Ventral retina homeodomain|
           protein)
          Length = 292

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
 Frame = +1

Query: 286 ALMIYVPGFPGLAETHR-----NPVHSLPRLASTGIASAAWPKP 402
           +L+   PG PGL  +HR     +P +S PRL     ASA+ P P
Sbjct: 199 SLLALTPGLPGLPASHRGTSLVDPRNSSPRLNPMPSASASSPLP 242

>Z585B_PONPY (Q5RB30) Zinc finger protein 585B|
          Length = 769

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +2

Query: 113 WMHLDLQEKN*FRDEVLKTRRH 178
           W HLDL ++N +RD +L+T  H
Sbjct: 41  WQHLDLSQRNLYRDVMLETYSH 62

>SLT_SALTY (P39434) Soluble lytic murein transglycosylase precursor (EC|
           3.2.1.-) (Slt70)
          Length = 645

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
 Frame = +1

Query: 190 FARVRPRYSAVRGLKTRCWSDSSAAARRGHMKALMIYVPGFPGLAETHRNPVHSLPRLAS 369
           F R  P     R L++R  ++    ARR   + L+ + P  PG  E   N  ++     S
Sbjct: 88  FVRANPTLPPARTLQSRFVNE---LARREDWRGLLAFSPEKPGTTEAQCNYYYA---KWS 141

Query: 370 TGIASAAWPKPKSVSL-GKVVHTVC 441
           TG   AAW   K + L GK     C
Sbjct: 142 TGQTEAAWQGAKDLWLTGKSQPNAC 166

>SYL_PORGI (Q7MW49) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
           (LeuRS)
          Length = 925

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -3

Query: 215 EYLGLTRANYALRDAVFSRPR 153
           ++LG  + NY LRDA+FSR R
Sbjct: 465 KHLGCVKVNYRLRDAIFSRQR 485

>Z585B_HUMAN (Q52M93) Zinc finger protein 585B (zinc finger protein 41-like|
           protein)
          Length = 769

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +2

Query: 113 WMHLDLQEKN*FRDEVLKTRRH 178
           W HLDL ++N +RD +L+T  H
Sbjct: 41  WRHLDLSQRNLYRDVMLETYSH 62

>MURB_TREPA (O83128) UDP-N-acetylenolpyruvoylglucosamine reductase (EC|
           1.1.1.158) (UDP-N-acetylmuramate dehydrogenase)
          Length = 354

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
 Frame = -3

Query: 458 GSPTITQTVWTTFPNDTDFGFGHAALAMP--VDANLGRLCTGFLCVSAKPGNP 306
           G P    +  T F    D+G+  +    P  V+ + GR     LCV   PGNP
Sbjct: 186 GGPFTCSSFQTVFARAGDWGYKRSPFQSPHGVELHAGRRLILSLCVRLTPGNP 238

>EURL_MOUSE (Q9D7G4) Protein EURL homolog|
          Length = 290

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 2   KANWSFIYSMEKLLQLATQCNKPSRHAL 85
           K NW   Y+  K L L ++C+K S+H L
Sbjct: 93  KINWIVQYAQNKNLDLESECSKTSQHPL 120

>DAX1_PIG (P79386) Nuclear receptor 0B1 (Nuclear receptor DAX-1)|
          Length = 471

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = +1

Query: 217 AVRGLKTRCWSDSSAAARRGHMKALMIYVPGFPGL 321
           A++G   +CWS   +     ++K  +++ P  PGL
Sbjct: 361 AIKGFLAKCWSLDISTKEYAYLKGTVLFNPDLPGL 395

>VAX2_HUMAN (Q9UIW0) Ventral anterior homeobox 2|
          Length = 290

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 5/44 (11%)
 Frame = +1

Query: 286 ALMIYVPGFPGLAETHR-----NPVHSLPRLASTGIASAAWPKP 402
           +L+   P  PGL  +HR     +P +S PRL     ASA+ P P
Sbjct: 199 SLLALTPSLPGLPASHRGTSLGDPRNSSPRLNPLSSASASPPLP 242

>RL11_ENCCU (Q8SSG9) 60S ribosomal protein L11|
          Length = 165

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
 Frame = -3

Query: 422 FPNDTDFGFG---HAALAMPVDANLGRLCTGFLCVSAKPGN 309
           F N+  FGFG   H  L +  D N+G     F  + A+PG+
Sbjct: 88  FSNNGCFGFGIEEHIDLGLKYDPNIGIFGMDFFVILARPGD 128

>SYL_BACTN (Q8A329) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
           (LeuRS)
          Length = 944

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -3

Query: 209 LGLTRANYALRDAVFSRPR 153
           LG  + NY LRDA+FSR R
Sbjct: 470 LGRVKVNYRLRDAIFSRQR 488

>MGR5_RAT (P31424) Metabotropic glutamate receptor 5 precursor (mGluR5)|
          Length = 1203

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -3

Query: 365  ANLGRLCTGFLCVSAKPGNPGT*IISAFIWPR 270
            AN+  L +  L  +A PG PGT I S+++ P+
Sbjct: 1066 ANISELNSMMLSTAATPGPPGTPICSSYLIPK 1097

>BPA1_HUMAN (Q03001) Bullous pemphigoid antigen 1 isoforms 1/2/3/4/5/8 (230 kDa|
           bullous pemphigoid antigen) (BPA) (Hemidesmosomal plaque
           protein) (Dystonia musculorum protein) (Dystonin)
           (Fragment)
          Length = 3214

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +1

Query: 307 GFPGLAETHRNPVHSLPRLASTG 375
           GFP LAET ++P+  LP +AS G
Sbjct: 11  GFPRLAETLQHPMCPLPLVASAG 33

>SYL_BACFR (Q64MG4) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
           (LeuRS)
          Length = 943

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 19/63 (30%), Positives = 30/63 (47%)
 Frame = -3

Query: 341 GFLCVSAKPGNPGT*IISAFIWPRLAAALESDQQRVFKPLTAEYLGLTRANYALRDAVFS 162
           G +  S +PG P   ++   +  + A A   +       + A  LG  + N+ LRDA+FS
Sbjct: 431 GIMMNSPRPGAPEGGLVLNGLTVKEAIAKTKEY------IKATGLGRVKVNFRLRDAIFS 484

Query: 161 RPR 153
           R R
Sbjct: 485 RQR 487

>GPA6_CAEEL (Q93743) Guanine nucleotide-binding protein alpha-6 subunit|
          Length = 364

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 18/38 (47%), Positives = 22/38 (57%)
 Frame = +2

Query: 17  FIYSMEKLLQLATQCNKPSRHALKQQESIFKTWMHLDL 130
           FI SM    QL  + NK +R  +KQ   IFKT +H DL
Sbjct: 234 FIVSMSDYDQLDPEDNKYNR--MKQSYEIFKTIVHSDL 269

>SALM_DROVI (P39806) Homeotic protein spalt-major|
          Length = 1402

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +1

Query: 304 PGFPGLAETHRNPVHSLPRLASTGIASAAWPKP 402
           P FPGL   +R P+  L  L +T  ++A  P P
Sbjct: 548 PAFPGLPGIYRPPMELLKSLGATAGSTAGLPHP 580

>DAX1_HUMAN (P51843) Nuclear receptor 0B1 (Nuclear receptor DAX-1) (DSS-AHC|
           critical region on the X chromosome protein 1)
          Length = 470

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
 Frame = +1

Query: 193 ARVRPRYSAVRGLK---TRCWSDSSAAARRGHMKALMIYVPGFPGL 321
           AR  P  S V+ +K   ++CWS + +     ++K  +++ P  PGL
Sbjct: 349 ARKVPSASQVQAIKCFLSKCWSLNISTKEYAYLKGTVLFNPDVPGL 394


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,407,476
Number of Sequences: 219361
Number of extensions: 1216249
Number of successful extensions: 3316
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3316
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)