ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart26b05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_187964.1| Oryza sativa (japonica cultivar-group), Ozsa838... 50 0.006
2ref|NM_187960.1| Oryza sativa (japonica cultivar-group), Ozsa838... 50 0.006
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
4dbj|AP002817.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
5dbj|AP001366.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
6gb|AC122143.2| Oryza sativa (japonica cultivar-group) chromosome... 48 0.025
7dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.025
8gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 48 0.025
9emb|BX897690.13| Zebrafish DNA sequence from clone CH211-197O9 i... 46 0.10
10gb|AC090711.3| Homo sapiens chromosome 8 clone RP11-89H1 map 8q2... 44 0.40
11gb|AC087110.3| Homo sapiens chromosome 8, clone CTD-2033B22, com... 44 0.40
12dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
13gb|AC106743.4| Homo sapiens chromosome 16 clone RP11-116D9, comp... 44 0.40
14dbj|AP003738.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
15gb|AC021325.5|AC021325 Homo sapiens chromosome , clone RP11-23N1... 42 1.6
16gb|AF246419.1|AF246419 Acidithiobacillus ferroxidans aspartate a... 42 1.6
17emb|AL928801.6| Mouse DNA sequence from clone RP23-116P4 on chro... 42 1.6
18gb|AC115031.11| Mus musculus chromosome 3, clone RP24-257J5, com... 42 1.6
19gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome 40 6.2
20gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome 40 6.2
21ref|NM_032037.2| Homo sapiens testis-specific serine kinase 6 (T... 40 6.2
22gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
23gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 6.2
24gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 6.2
25emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 6.2
26ref|XM_643073.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 6.2
27gb|AE014075.1| Escherichia coli CFT073, complete genome 40 6.2
28gb|CP000243.1| Escherichia coli UTI89, complete genome 40 6.2
29emb|AL356967.23| Human DNA sequence from clone RP11-427E4 on chr... 40 6.2
30gb|AC093489.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
31gb|BC014611.2| Homo sapiens testis-specific serine kinase 6, mRN... 40 6.2
32gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 6.2
33gb|AC011448.5| Homo sapiens chromosome 19 clone CTC-260F20, comp... 40 6.2
34gb|AC149226.11| Danio rerio clone ch211-252j18, complete sequence 40 6.2
35gb|AE012068.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 6.2
36gb|AC159628.2| Mus musculus BAC clone RP24-206C4 from chromosome... 40 6.2
37gb|AF348077.1|AF348077 Homo sapiens serine/threonine kinase FKSG... 40 6.2
38gb|AY335719.1| Synthetic construct Homo sapiens serine/threonine... 40 6.2
39dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
40gb|AF329483.1| Homo sapiens serine/threonine protein kinase SSTK... 40 6.2
41gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome 40 6.2
42dbj|AK172841.1| Homo sapiens cDNA FLJ24002 fis, clone KAIA4350, ... 40 6.2
43dbj|AK058166.1| Homo sapiens cDNA FLJ25437 fis, clone TST08312 40 6.2
44dbj|AK069089.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
45emb|AL445363.7|CNS07ECY Human chromosome 14 DNA sequence BAC R-6... 40 6.2
46emb|CR536612.8| Zebrafish DNA sequence from clone DKEY-1O1 in li... 40 6.2
47gb|CP000034.1| Shigella dysenteriae Sd197, complete genome 40 6.2 
>ref|NM_187964.1| Oryza sativa (japonica cultivar-group), Ozsa8384 predicted mRNA
          Length = 1383

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 373  ggcatcgccagcgcggcgtggccgaagccgaagtcggtgtc 413
            |||| ||||| |||||||||||||  |||||||||||||||
Sbjct: 1145 ggcagcgccatcgcggcgtggccgtggccgaagtcggtgtc 1105
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>ref|NM_187960.1| Oryza sativa (japonica cultivar-group), Ozsa8380 predicted mRNA
          Length = 1383

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 373  ggcatcgccagcgcggcgtggccgaagccgaagtcggtgtc 413
            |||| ||||| |||||||||||||  |||||||||||||||
Sbjct: 1145 ggcagcgccatcgcggcgtggccgtggccgaagtcggtgtc 1105
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                        
Query: 373     ggcatcgccagcgcggcgtggccgaagccgaagtcggtgtc 413
               |||| ||||| |||||||||||||  |||||||||||||||
Sbjct: 8835764 ggcagcgccatcgcggcgtggccgtggccgaagtcggtgtc 8835724



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                        
Query: 373     ggcatcgccagcgcggcgtggccgaagccgaagtcggtgtc 413
               |||| ||||| |||||||||||||  |||||||||||||||
Sbjct: 8816128 ggcagcgccatcgcggcgtggccgtggccgaagtcggtgtc 8816168
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>dbj|AP002817.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0699D11
          Length = 140825

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                       
Query: 373    ggcatcgccagcgcggcgtggccgaagccgaagtcggtgtc 413
              |||| ||||| |||||||||||||  |||||||||||||||
Sbjct: 133585 ggcagcgccatcgcggcgtggccgtggccgaagtcggtgtc 133625
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>dbj|AP001366.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0469E09
          Length = 146081

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                      
Query: 373   ggcatcgccagcgcggcgtggccgaagccgaagtcggtgtc 413
             |||| ||||| |||||||||||||  |||||||||||||||
Sbjct: 71792 ggcagcgccatcgcggcgtggccgtggccgaagtcggtgtc 71752



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                      
Query: 373   ggcatcgccagcgcggcgtggccgaagccgaagtcggtgtc 413
             |||| ||||| |||||||||||||  |||||||||||||||
Sbjct: 52156 ggcagcgccatcgcggcgtggccgtggccgaagtcggtgtc 52196
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>gb|AC122143.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0090F16, complete sequence
          Length = 147341

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 63/76 (82%)
 Strand = Plus / Minus

                                                                         
Query: 215   ccgcggtgagaggcttgaagacacgctgctggtctgactctagcgcggccgcgaggcgag 274
             |||| ||||||||||||||||  || || | ||| ||||| ||||| ||||| || || |
Sbjct: 94217 ccgccgtgagaggcttgaagatgcggtggtcgtcggactccagcgccgccgccagccgcg 94158

                             
Query: 275   gccatatgaaggcgct 290
             |||||||| |||||||
Sbjct: 94157 gccatatgtaggcgct 94142
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 63/76 (82%)
 Strand = Plus / Plus

                                                                            
Query: 215      ccgcggtgagaggcttgaagacacgctgctggtctgactctagcgcggccgcgaggcgag 274
                |||| ||||||||||||||||  || || | ||| ||||| ||||| ||||| || || |
Sbjct: 24728271 ccgccgtgagaggcttgaagatgcggtggtcgtcggactccagcgccgccgccagccgcg 24728330

                                
Query: 275      gccatatgaaggcgct 290
                |||||||| |||||||
Sbjct: 24728331 gccatatgtaggcgct 24728346
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 63/76 (82%)
 Strand = Plus / Plus

                                                                            
Query: 215      ccgcggtgagaggcttgaagacacgctgctggtctgactctagcgcggccgcgaggcgag 274
                |||| ||||||||||||||||  || || | ||| ||||| ||||| ||||| || || |
Sbjct: 25039941 ccgccgtgagaggcttgaagatgcggtggtcgtcggactccagcgccgccgccagccgcg 25040000

                                
Query: 275      gccatatgaaggcgct 290
                |||||||| |||||||
Sbjct: 25040001 gccatatgtaggcgct 25040016
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>emb|BX897690.13| Zebrafish DNA sequence from clone CH211-197O9 in linkage group 20,
             complete sequence
          Length = 128296

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 109   aacatggatgcatttggatttgc 131
             |||||||||||||||||||||||
Sbjct: 47497 aacatggatgcatttggatttgc 47475



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   atggatgcatttggatttgc 131
             ||||||||||||||||||||
Sbjct: 46879 atggatgcatttggatttgc 46860
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>gb|AC090711.3| Homo sapiens chromosome 8 clone RP11-89H1 map 8q21-q23, complete
             sequence
          Length = 153053

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 20    atttattcaatggagaaacttttacaactc 49
             |||| ||||||||| |||||||||||||||
Sbjct: 35388 attttttcaatggaaaaacttttacaactc 35359
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>gb|AC087110.3| Homo sapiens chromosome 8, clone CTD-2033B22, complete sequence
          Length = 145544

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 20    atttattcaatggagaaacttttacaactc 49
             |||| ||||||||| |||||||||||||||
Sbjct: 84355 attttttcaatggaaaaacttttacaactc 84384
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                         
Query: 373     ggcatcgccagcgcggcgtggccgaagccgaagtcggtgtcg 414
               ||||| || ||||| || |||||||| |||||||||||||||
Sbjct: 8092349 ggcatggcgagcgccgcctggccgaacccgaagtcggtgtcg 8092308
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>gb|AC106743.4| Homo sapiens chromosome 16 clone RP11-116D9, complete sequence
          Length = 117710

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 128   ttgcaggagaagaattaatttagaga 153
             ||||||||| ||||||||||||||||
Sbjct: 92650 ttgcaggaggagaattaatttagaga 92675
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>dbj|AP003738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1058_C08
          Length = 117923

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 373   ggcatcgccagcgcggcgtggccgaagccgaagtcggtgtcg 414
             ||||| || ||||| || |||||||| |||||||||||||||
Sbjct: 26121 ggcatggcgagcgccgcctggccgaacccgaagtcggtgtcg 26080
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>gb|AC021325.5|AC021325 Homo sapiens chromosome , clone RP11-23N15, complete sequence
          Length = 180568

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 141   attaatttagagacgaggtct 161
             |||||||||||||||||||||
Sbjct: 27684 attaatttagagacgaggtct 27664
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>gb|AF246419.1|AF246419 Acidithiobacillus ferroxidans aspartate aminotransferase gene,
           partial sequence
          Length = 1602

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 385 gcggcgtggccgaagccgaag 405
           |||||||||||||||||||||
Sbjct: 732 gcggcgtggccgaagccgaag 752
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>emb|AL928801.6| Mouse DNA sequence from clone RP23-116P4 on chromosome 2, complete
             sequence
          Length = 132674

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 122   ttggatttgcaggagaagaattaat 146
             ||||||||| |||||||||||||||
Sbjct: 28242 ttggatttggaggagaagaattaat 28266
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>gb|AC115031.11| Mus musculus chromosome 3, clone RP24-257J5, complete sequence
          Length = 170460

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 25     ttcaatggagaaacttttacaactc 49
              ||||||||| |||||||||||||||
Sbjct: 151426 ttcaatggaaaaacttttacaactc 151402
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>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome
          Length = 4607203

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 371     ccggcatcgccagcgcggcg 390
               ||||||||||||||||||||
Sbjct: 3198311 ccggcatcgccagcgcggcg 3198292
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>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 338     accccgtgcacagcctgccg 357
               ||||||||||||||||||||
Sbjct: 3446202 accccgtgcacagcctgccg 3446221
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>ref|NM_032037.2| Homo sapiens testis-specific serine kinase 6 (TSSK6), mRNA
          Length = 1442

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 392 ggccgaagccgaagtcggtg 411
           ||||||||||||||||||||
Sbjct: 708 ggccgaagccgaagtcggtg 689
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>gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1007D10,
             complete sequence
          Length = 153366

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    tttatttattcaatggagaa 36
             ||||||||||||||||||||
Sbjct: 63221 tttatttattcaatggagaa 63240
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 399     gccgaagtcggtgtcgttgg 418
               ||||||||||||||||||||
Sbjct: 5901628 gccgaagtcggtgtcgttgg 5901609
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>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 399    gccgaagtcggtgtcgttgg 418
              ||||||||||||||||||||
Sbjct: 486896 gccgaagtcggtgtcgttgg 486877
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 399     gccgaagtcggtgtcgttgg 418
               ||||||||||||||||||||
Sbjct: 4907524 gccgaagtcggtgtcgttgg 4907543
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>ref|XM_643073.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (528.t00001)
           partial mRNA
          Length = 2586

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 120 atttggatttgcaggagaag 139
           ||||||||||||||||||||
Sbjct: 345 atttggatttgcaggagaag 364
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>gb|AE014075.1| Escherichia coli CFT073, complete genome
          Length = 5231428

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 371     ccggcatcgccagcgcggcg 390
               ||||||||||||||||||||
Sbjct: 3649866 ccggcatcgccagcgcggcg 3649847
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>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 371     ccggcatcgccagcgcggcg 390
               ||||||||||||||||||||
Sbjct: 3437082 ccggcatcgccagcgcggcg 3437063
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>emb|AL356967.23| Human DNA sequence from clone RP11-427E4 on chromosome 6 Contains a
             novel pseudogene, complete sequence
          Length = 163869

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    attcaatggagaaactttta 43
             ||||||||||||||||||||
Sbjct: 39215 attcaatggagaaactttta 39196
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>gb|AC093489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1116_A10,
             complete sequence
          Length = 102275

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    tttatttattcaatggagaa 36
             ||||||||||||||||||||
Sbjct: 62061 tttatttattcaatggagaa 62080
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>gb|BC014611.2| Homo sapiens testis-specific serine kinase 6, mRNA (cDNA clone
           MGC:26987 IMAGE:4826305), complete cds
          Length = 1345

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 392 ggccgaagccgaagtcggtg 411
           ||||||||||||||||||||
Sbjct: 596 ggccgaagccgaagtcggtg 577
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 399     gccgaagtcggtgtcgttgg 418
               ||||||||||||||||||||
Sbjct: 6570044 gccgaagtcggtgtcgttgg 6570025
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>gb|AC011448.5| Homo sapiens chromosome 19 clone CTC-260F20, complete sequence
          Length = 165122

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 392   ggccgaagccgaagtcggtg 411
             ||||||||||||||||||||
Sbjct: 77052 ggccgaagccgaagtcggtg 77071
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>gb|AC149226.11| Danio rerio clone ch211-252j18, complete sequence
          Length = 154059

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     gaaggcaaactggagcttta 20
             ||||||||||||||||||||
Sbjct: 69953 gaaggcaaactggagcttta 69972
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>gb|AE012068.1| Xanthomonas axonopodis pv. citri str. 306,  section 446 of 469 of the
            complete genome
          Length = 10884

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 399  gccgaagtcggtgtcgttgg 418
            ||||||||||||||||||||
Sbjct: 5223 gccgaagtcggtgtcgttgg 5242
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>gb|AC159628.2| Mus musculus BAC clone RP24-206C4 from chromosome 12, complete sequence
          Length = 161791

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     aaggcaaactggagctttat 21
             ||||||||||||||||||||
Sbjct: 64903 aaggcaaactggagctttat 64884
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>gb|AF348077.1|AF348077 Homo sapiens serine/threonine kinase FKSG82 (FKSG82) mRNA, complete
           cds
          Length = 1467

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 392 ggccgaagccgaagtcggtg 411
           ||||||||||||||||||||
Sbjct: 733 ggccgaagccgaagtcggtg 714
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>gb|AY335719.1| Synthetic construct Homo sapiens serine/threonine protein kinase
           SSTK (SSTK) mRNA, partial cds
          Length = 822

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 392 ggccgaagccgaagtcggtg 411
           ||||||||||||||||||||
Sbjct: 475 ggccgaagccgaagtcggtg 456
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 17      tttatttattcaatggagaa 36
               ||||||||||||||||||||
Sbjct: 5376547 tttatttattcaatggagaa 5376566
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>gb|AF329483.1| Homo sapiens serine/threonine protein kinase SSTK (SSTK) mRNA,
           complete cds
          Length = 1554

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 392 ggccgaagccgaagtcggtg 411
           ||||||||||||||||||||
Sbjct: 597 ggccgaagccgaagtcggtg 578
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>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome
          Length = 4599354

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 371     ccggcatcgccagcgcggcg 390
               ||||||||||||||||||||
Sbjct: 3186973 ccggcatcgccagcgcggcg 3186954
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>dbj|AK172841.1| Homo sapiens cDNA FLJ24002 fis, clone KAIA4350, highly similar to
            Homo sapiens serine/threonine protein kinase SSTK (SSTK)
          Length = 2535

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 392  ggccgaagccgaagtcggtg 411
            ||||||||||||||||||||
Sbjct: 1077 ggccgaagccgaagtcggtg 1058
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>dbj|AK058166.1| Homo sapiens cDNA FLJ25437 fis, clone TST08312
          Length = 1266

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 392 ggccgaagccgaagtcggtg 411
           ||||||||||||||||||||
Sbjct: 553 ggccgaagccgaagtcggtg 534
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>dbj|AK069089.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008B14, full
            insert sequence
          Length = 3756

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 17   tttatttattcaatggagaa 36
            ||||||||||||||||||||
Sbjct: 3680 tttatttattcaatggagaa 3699
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>emb|AL445363.7|CNS07ECY Human chromosome 14 DNA sequence BAC R-671J11 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 181987

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 142    ttaatttagagacgaggtct 161
              ||||||||||||||||||||
Sbjct: 120425 ttaatttagagacgaggtct 120406
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>emb|CR536612.8| Zebrafish DNA sequence from clone DKEY-1O1 in linkage group 15,
             complete sequence
          Length = 224998

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     gaaggcaaactggagcttta 20
             ||||||||||||||||||||
Sbjct: 25502 gaaggcaaactggagcttta 25483
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>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome
          Length = 4369232

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 371     ccggcatcgccagcgcggcg 390
               ||||||||||||||||||||
Sbjct: 3009575 ccggcatcgccagcgcggcg 3009556


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,469,647
Number of Sequences: 3902068
Number of extensions: 3469647
Number of successful extensions: 69214
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 68701
Number of HSP's gapped (non-prelim): 514
length of query: 460
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 438
effective length of database: 17,147,199,772
effective search space: 7510473500136
effective search space used: 7510473500136
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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